Protein–RNA interactions for Protein: Q6NXT2

H3F3C, Histone H3.3C, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3CQ6NXT2 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC5.27□□□□□ -1.57
H3F3CQ6NXT2 LINC00032-203ENST00000640247 1374 ntTSL 5 BASIC5.27□□□□□ -1.57
H3F3CQ6NXT2 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
H3F3CQ6NXT2 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
H3F3CQ6NXT2 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
H3F3CQ6NXT2 HYAL4-202ENST00000476325 1616 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
H3F3CQ6NXT2 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
H3F3CQ6NXT2 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC5.26□□□□□ -1.57
H3F3CQ6NXT2 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC5.26□□□□□ -1.57
H3F3CQ6NXT2 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
H3F3CQ6NXT2 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
H3F3CQ6NXT2 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
H3F3CQ6NXT2 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
H3F3CQ6NXT2 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC5.26□□□□□ -1.57
H3F3CQ6NXT2 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
H3F3CQ6NXT2 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC5.26□□□□□ -1.57
H3F3CQ6NXT2 TANK-203ENST00000402568 878 ntTSL 5 BASIC5.26□□□□□ -1.57
H3F3CQ6NXT2 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC5.26□□□□□ -1.57
H3F3CQ6NXT2 AC117434.1-201ENST00000419971 836 ntBASIC5.26□□□□□ -1.57
H3F3CQ6NXT2 AC244035.2-201ENST00000425896 630 ntTSL 3 BASIC5.26□□□□□ -1.57
H3F3CQ6NXT2 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC5.26□□□□□ -1.57
H3F3CQ6NXT2 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
H3F3CQ6NXT2 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
H3F3CQ6NXT2 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC5.26□□□□□ -1.57
H3F3CQ6NXT2 RPS26P39-201ENST00000469206 341 ntBASIC5.26□□□□□ -1.57
H3F3CQ6NXT2 AC108693.1-201ENST00000496068 432 ntBASIC5.26□□□□□ -1.57
H3F3CQ6NXT2 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC5.26□□□□□ -1.57
H3F3CQ6NXT2 DUTP7-201ENST00000507982 486 ntBASIC5.26□□□□□ -1.57
H3F3CQ6NXT2 MINCR-206ENST00000524335 499 ntTSL 2 BASIC5.26□□□□□ -1.57
H3F3CQ6NXT2 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC5.26□□□□□ -1.57
H3F3CQ6NXT2 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC5.26□□□□□ -1.57
H3F3CQ6NXT2 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC5.26□□□□□ -1.57
H3F3CQ6NXT2 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC5.26□□□□□ -1.57
H3F3CQ6NXT2 AC015720.2-201ENST00000567709 334 ntBASIC5.26□□□□□ -1.57
H3F3CQ6NXT2 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC5.26□□□□□ -1.57
H3F3CQ6NXT2 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC5.26□□□□□ -1.57
H3F3CQ6NXT2 AC090607.5-201ENST00000615692 224 ntBASIC5.26□□□□□ -1.57
H3F3CQ6NXT2 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC5.26□□□□□ -1.57
H3F3CQ6NXT2 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
H3F3CQ6NXT2 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC5.26□□□□□ -1.57
H3F3CQ6NXT2 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
H3F3CQ6NXT2 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
H3F3CQ6NXT2 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
H3F3CQ6NXT2 ADAM24P-201ENST00000398655 2101 ntBASIC5.26□□□□□ -1.57
H3F3CQ6NXT2 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
H3F3CQ6NXT2 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
H3F3CQ6NXT2 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
H3F3CQ6NXT2 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
H3F3CQ6NXT2 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
H3F3CQ6NXT2 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC5.25□□□□□ -1.57
H3F3CQ6NXT2 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
H3F3CQ6NXT2 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
H3F3CQ6NXT2 AFP-201ENST00000226359 1914 ntTSL 5 BASIC5.25□□□□□ -1.57
H3F3CQ6NXT2 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
H3F3CQ6NXT2 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
H3F3CQ6NXT2 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
H3F3CQ6NXT2 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
H3F3CQ6NXT2 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC5.25□□□□□ -1.57
H3F3CQ6NXT2 SPATA4-201ENST00000280191 1169 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
H3F3CQ6NXT2 RNA5SP453-201ENST00000362503 119 ntBASIC5.25□□□□□ -1.57
H3F3CQ6NXT2 RN7SKP162-201ENST00000363605 345 ntBASIC5.25□□□□□ -1.57
H3F3CQ6NXT2 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC5.25□□□□□ -1.57
H3F3CQ6NXT2 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
H3F3CQ6NXT2 KCNJ13-202ENST00000409779 1099 ntTSL 2 BASIC5.25□□□□□ -1.57
H3F3CQ6NXT2 RNU6-233P-201ENST00000410845 141 ntBASIC5.25□□□□□ -1.57
H3F3CQ6NXT2 RMRPP5-201ENST00000411156 267 ntBASIC5.25□□□□□ -1.57
H3F3CQ6NXT2 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC5.25□□□□□ -1.57
H3F3CQ6NXT2 MARK2P12-201ENST00000420129 585 ntBASIC5.25□□□□□ -1.57
H3F3CQ6NXT2 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC5.25□□□□□ -1.57
H3F3CQ6NXT2 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC5.25□□□□□ -1.57
H3F3CQ6NXT2 VN1R21P-201ENST00000426703 765 ntBASIC5.25□□□□□ -1.57
H3F3CQ6NXT2 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC5.25□□□□□ -1.57
H3F3CQ6NXT2 AC012075.1-201ENST00000436549 580 ntBASIC5.25□□□□□ -1.57
H3F3CQ6NXT2 SPRYD7P1-201ENST00000443861 570 ntBASIC5.25□□□□□ -1.57
H3F3CQ6NXT2 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC5.25□□□□□ -1.57
H3F3CQ6NXT2 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC5.25□□□□□ -1.57
H3F3CQ6NXT2 RPS23P2-201ENST00000463671 415 ntBASIC5.25□□□□□ -1.57
H3F3CQ6NXT2 AC079080.1-201ENST00000479841 822 ntBASIC5.25□□□□□ -1.57
H3F3CQ6NXT2 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
H3F3CQ6NXT2 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC5.25□□□□□ -1.57
H3F3CQ6NXT2 EIF3LP3-201ENST00000495197 822 ntBASIC5.25□□□□□ -1.57
H3F3CQ6NXT2 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC5.25□□□□□ -1.57
H3F3CQ6NXT2 snoU109.5-201ENST00000516231 132 ntBASIC5.25□□□□□ -1.57
H3F3CQ6NXT2 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC5.25□□□□□ -1.57
H3F3CQ6NXT2 HSPE1P2-201ENST00000554777 306 ntBASIC5.25□□□□□ -1.57
H3F3CQ6NXT2 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC5.25□□□□□ -1.57
H3F3CQ6NXT2 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC5.25□□□□□ -1.57
H3F3CQ6NXT2 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC5.25□□□□□ -1.57
H3F3CQ6NXT2 OR8G7P-201ENST00000616658 848 ntBASIC5.25□□□□□ -1.57
H3F3CQ6NXT2 AC069234.4-201ENST00000621276 412 ntBASIC5.25□□□□□ -1.57
H3F3CQ6NXT2 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
H3F3CQ6NXT2 AP004607.3-201ENST00000530354 3915 ntBASIC5.25□□□□□ -1.57
H3F3CQ6NXT2 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
H3F3CQ6NXT2 AL161756.3-201ENST00000641216 2071 ntBASIC5.25□□□□□ -1.57
H3F3CQ6NXT2 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC5.24□□□□□ -1.57
H3F3CQ6NXT2 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
H3F3CQ6NXT2 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
H3F3CQ6NXT2 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC5.24□□□□□ -1.57
H3F3CQ6NXT2 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
H3F3CQ6NXT2 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 75.4 ms