Protein–RNA interactions for Protein: Q5VT40

FAM78B, Protein FAM78B, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM78BQ5VT40 AC010325.1-202ENST00000562076 279 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
FAM78BQ5VT40 AC145285.4-201ENST00000568183 540 ntTSL 3 BASIC4.45□□□□□ -1.7
FAM78BQ5VT40 MIR3154-201ENST00000577829 84 ntBASIC4.45□□□□□ -1.7
FAM78BQ5VT40 DHFRP1-201ENST00000579682 559 ntBASIC4.45□□□□□ -1.7
FAM78BQ5VT40 MIR4701-201ENST00000583094 63 ntBASIC4.45□□□□□ -1.7
FAM78BQ5VT40 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC4.45□□□□□ -1.7
FAM78BQ5VT40 APOC2-205ENST00000592257 444 ntTSL 3 BASIC4.45□□□□□ -1.7
FAM78BQ5VT40 AC012370.2-201ENST00000597541 1080 ntTSL 5 BASIC4.45□□□□□ -1.7
FAM78BQ5VT40 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC4.45□□□□□ -1.7
FAM78BQ5VT40 AC015574.1-202ENST00000616588 456 ntTSL 5 BASIC4.45□□□□□ -1.7
FAM78BQ5VT40 TEX41-293ENST00000630451 690 ntTSL 5 BASIC4.45□□□□□ -1.7
FAM78BQ5VT40 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC4.45□□□□□ -1.7
FAM78BQ5VT40 OR11H2-202ENST00000641517 1085 ntBASIC4.45□□□□□ -1.7
FAM78BQ5VT40 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
FAM78BQ5VT40 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC4.45□□□□□ -1.7
FAM78BQ5VT40 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
FAM78BQ5VT40 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
FAM78BQ5VT40 ATP5A1P1-201ENST00000454088 1321 ntBASIC4.45□□□□□ -1.7
FAM78BQ5VT40 ADAM5-202ENST00000399789 1942 ntBASIC4.44□□□□□ -1.7
FAM78BQ5VT40 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC4.44□□□□□ -1.7
FAM78BQ5VT40 AC027228.2-201ENST00000567141 2154 ntBASIC4.44□□□□□ -1.7
FAM78BQ5VT40 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC4.44□□□□□ -1.7
FAM78BQ5VT40 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
FAM78BQ5VT40 AC079097.1-201ENST00000512187 1399 ntBASIC4.44□□□□□ -1.7
FAM78BQ5VT40 AL022322.2-201ENST00000624072 20397 ntBASIC4.44□□□□□ -1.7
FAM78BQ5VT40 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC4.44□□□□□ -1.7
FAM78BQ5VT40 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
FAM78BQ5VT40 CLC-201ENST00000221804 635 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
FAM78BQ5VT40 C3orf14-201ENST00000232519 690 ntAPPRIS P1 TSL 3 BASIC4.44□□□□□ -1.7
FAM78BQ5VT40 OR9K1P-201ENST00000326513 941 ntBASIC4.44□□□□□ -1.7
FAM78BQ5VT40 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
FAM78BQ5VT40 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC4.44□□□□□ -1.7
FAM78BQ5VT40 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
FAM78BQ5VT40 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
FAM78BQ5VT40 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC4.44□□□□□ -1.7
FAM78BQ5VT40 KCNJ13-202ENST00000409779 1099 ntTSL 2 BASIC4.44□□□□□ -1.7
FAM78BQ5VT40 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC4.44□□□□□ -1.7
FAM78BQ5VT40 RNF10P1-201ENST00000418589 369 ntBASIC4.44□□□□□ -1.7
FAM78BQ5VT40 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC4.44□□□□□ -1.7
FAM78BQ5VT40 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC4.44□□□□□ -1.7
FAM78BQ5VT40 PCBP2P1-201ENST00000437262 977 ntBASIC4.44□□□□□ -1.7
FAM78BQ5VT40 AL136455.1-201ENST00000441083 1240 ntBASIC4.44□□□□□ -1.7
FAM78BQ5VT40 RPL5P7-201ENST00000444235 813 ntBASIC4.44□□□□□ -1.7
FAM78BQ5VT40 EEF1B2P3-201ENST00000447718 678 ntBASIC4.44□□□□□ -1.7
FAM78BQ5VT40 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC4.44□□□□□ -1.7
FAM78BQ5VT40 NXT1P1-201ENST00000458481 316 ntBASIC4.44□□□□□ -1.7
FAM78BQ5VT40 RN7SL515P-201ENST00000463999 297 ntBASIC4.44□□□□□ -1.7
FAM78BQ5VT40 AC098847.1-201ENST00000473094 348 ntBASIC4.44□□□□□ -1.7
FAM78BQ5VT40 AC092865.4-201ENST00000477936 615 ntBASIC4.44□□□□□ -1.7
FAM78BQ5VT40 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC4.44□□□□□ -1.7
FAM78BQ5VT40 AC021006.1-201ENST00000489849 553 ntBASIC4.44□□□□□ -1.7
FAM78BQ5VT40 OR9N1P-201ENST00000491296 333 ntBASIC4.44□□□□□ -1.7
FAM78BQ5VT40 DUBR-205ENST00000495228 411 ntTSL 2 BASIC4.44□□□□□ -1.7
FAM78BQ5VT40 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC4.44□□□□□ -1.7
FAM78BQ5VT40 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC4.44□□□□□ -1.7
FAM78BQ5VT40 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC4.44□□□□□ -1.7
FAM78BQ5VT40 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC4.44□□□□□ -1.7
FAM78BQ5VT40 FAU-203ENST00000525297 355 ntTSL 5 BASIC4.44□□□□□ -1.7
FAM78BQ5VT40 TPPP2-208ENST00000530140 703 ntAPPRIS P1 TSL 2 BASIC4.44□□□□□ -1.7
FAM78BQ5VT40 NPIPA8-202ENST00000541810 1131 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
FAM78BQ5VT40 C3orf14-207ENST00000542214 768 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
FAM78BQ5VT40 A2MP1-201ENST00000543404 1201 ntTSL 5 BASIC4.44□□□□□ -1.7
FAM78BQ5VT40 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC4.44□□□□□ -1.7
FAM78BQ5VT40 NPIPA3-203ENST00000552140 1053 ntTSL 5 BASIC4.44□□□□□ -1.7
FAM78BQ5VT40 NPIPA2-203ENST00000553201 1053 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
FAM78BQ5VT40 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC4.44□□□□□ -1.7
FAM78BQ5VT40 NMNAT1P5-201ENST00000559657 841 ntBASIC4.44□□□□□ -1.7
FAM78BQ5VT40 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC4.44□□□□□ -1.7
FAM78BQ5VT40 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC4.44□□□□□ -1.7
FAM78BQ5VT40 AC002519.2-203ENST00000567043 837 ntBASIC4.44□□□□□ -1.7
FAM78BQ5VT40 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
FAM78BQ5VT40 AC127024.5-201ENST00000580085 462 ntBASIC4.44□□□□□ -1.7
FAM78BQ5VT40 MIR4502-201ENST00000580432 81 ntBASIC4.44□□□□□ -1.7
FAM78BQ5VT40 AC243756.1-201ENST00000584068 660 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
FAM78BQ5VT40 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC4.44□□□□□ -1.7
FAM78BQ5VT40 AC020909.2-201ENST00000595005 626 ntTSL 2 BASIC4.44□□□□□ -1.7
FAM78BQ5VT40 AC083798.2-201ENST00000608756 1152 ntTSL 4 BASIC4.44□□□□□ -1.7
FAM78BQ5VT40 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC4.44□□□□□ -1.7
FAM78BQ5VT40 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC4.44□□□□□ -1.7
FAM78BQ5VT40 MALAT1-214ENST00000618925 424 ntTSL 5 BASIC4.44□□□□□ -1.7
FAM78BQ5VT40 AC048341.3-201ENST00000619323 491 ntBASIC4.44□□□□□ -1.7
FAM78BQ5VT40 NEK3-211ENST00000629912 141 ntTSL 5 BASIC4.44□□□□□ -1.7
FAM78BQ5VT40 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
FAM78BQ5VT40 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
FAM78BQ5VT40 AC021242.1-201ENST00000507315 2035 ntBASIC4.44□□□□□ -1.7
FAM78BQ5VT40 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
FAM78BQ5VT40 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
FAM78BQ5VT40 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC4.44□□□□□ -1.7
FAM78BQ5VT40 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
FAM78BQ5VT40 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.44□□□□□ -1.7
FAM78BQ5VT40 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
FAM78BQ5VT40 STX3-208ENST00000641815 3236 ntBASIC4.44□□□□□ -1.7
FAM78BQ5VT40 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
FAM78BQ5VT40 ITGB1-201ENST00000302278 3640 ntAPPRIS P2 TSL 1 (best) BASIC4.44□□□□□ -1.7
FAM78BQ5VT40 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
FAM78BQ5VT40 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC4.43□□□□□ -1.7
FAM78BQ5VT40 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC4.43□□□□□ -1.7
FAM78BQ5VT40 USP45-204ENST00000369233 2514 ntTSL 5 BASIC4.43□□□□□ -1.7
FAM78BQ5VT40 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
FAM78BQ5VT40 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 90.7 ms