Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 Z83820.1-201ENST00000456978 1499 ntBASIC5.17□□□□□ -1.58
RFX4Q33E94 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
RFX4Q33E94 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
RFX4Q33E94 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC5.17□□□□□ -1.58
RFX4Q33E94 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
RFX4Q33E94 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC5.17□□□□□ -1.58
RFX4Q33E94 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
RFX4Q33E94 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC5.17□□□□□ -1.58
RFX4Q33E94 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
RFX4Q33E94 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
RFX4Q33E94 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC5.16□□□□□ -1.58
RFX4Q33E94 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
RFX4Q33E94 AC100757.1-201ENST00000616872 1835 ntBASIC5.16□□□□□ -1.58
RFX4Q33E94 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
RFX4Q33E94 AC073136.1-201ENST00000449426 2884 ntBASIC5.16□□□□□ -1.58
RFX4Q33E94 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
RFX4Q33E94 CDY11P-201ENST00000447168 1651 ntBASIC5.16□□□□□ -1.58
RFX4Q33E94 RNFT1P3-201ENST00000340898 1052 ntBASIC5.16□□□□□ -1.58
RFX4Q33E94 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC5.16□□□□□ -1.58
RFX4Q33E94 RPL21P67-201ENST00000402896 478 ntBASIC5.16□□□□□ -1.58
RFX4Q33E94 RN7SKP29-201ENST00000410957 272 ntBASIC5.16□□□□□ -1.58
RFX4Q33E94 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC5.16□□□□□ -1.58
RFX4Q33E94 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
RFX4Q33E94 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC5.16□□□□□ -1.58
RFX4Q33E94 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC5.16□□□□□ -1.58
RFX4Q33E94 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC5.16□□□□□ -1.58
RFX4Q33E94 RPL19P16-201ENST00000433839 588 ntBASIC5.16□□□□□ -1.58
RFX4Q33E94 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC5.16□□□□□ -1.58
RFX4Q33E94 AL596266.1-201ENST00000448132 400 ntBASIC5.16□□□□□ -1.58
RFX4Q33E94 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC5.16□□□□□ -1.58
RFX4Q33E94 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC5.16□□□□□ -1.58
RFX4Q33E94 RN7SL570P-201ENST00000484405 292 ntBASIC5.16□□□□□ -1.58
RFX4Q33E94 RABGAP1L-216ENST00000486220 772 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
RFX4Q33E94 MYL12BP2-201ENST00000503948 512 ntBASIC5.16□□□□□ -1.58
RFX4Q33E94 AC018797.1-201ENST00000510791 255 ntBASIC5.16□□□□□ -1.58
RFX4Q33E94 SPINK13-202ENST00000511106 661 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
RFX4Q33E94 AC139722.1-201ENST00000512502 782 ntTSL 3 BASIC5.16□□□□□ -1.58
RFX4Q33E94 ANAPC10-213ENST00000512680 505 ntTSL 3 BASIC5.16□□□□□ -1.58
RFX4Q33E94 AC097537.1-201ENST00000514864 1213 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
RFX4Q33E94 AC139365.2-201ENST00000517972 253 ntBASIC5.16□□□□□ -1.58
RFX4Q33E94 CDC42P3-201ENST00000518493 633 ntBASIC5.16□□□□□ -1.58
RFX4Q33E94 AC027117.1-201ENST00000520646 667 ntTSL 5 BASIC5.16□□□□□ -1.58
RFX4Q33E94 AC011632.2-201ENST00000520696 738 ntTSL 3 BASIC5.16□□□□□ -1.58
RFX4Q33E94 WBP1LP3-201ENST00000523033 208 ntBASIC5.16□□□□□ -1.58
RFX4Q33E94 AC078864.1-201ENST00000547538 512 ntTSL 4 BASIC5.16□□□□□ -1.58
RFX4Q33E94 AC090502.3-201ENST00000552046 529 ntTSL 3 BASIC5.16□□□□□ -1.58
RFX4Q33E94 AL121790.1-201ENST00000554829 738 ntTSL 3 BASIC5.16□□□□□ -1.58
RFX4Q33E94 AC006349.1-201ENST00000555526 235 ntBASIC5.16□□□□□ -1.58
RFX4Q33E94 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC5.16□□□□□ -1.58
RFX4Q33E94 LINC02193-202ENST00000566864 719 ntTSL 3 BASIC5.16□□□□□ -1.58
RFX4Q33E94 OR1E3-201ENST00000575608 948 ntBASIC5.16□□□□□ -1.58
RFX4Q33E94 LINC01862-201ENST00000593792 478 ntTSL 2 BASIC5.16□□□□□ -1.58
RFX4Q33E94 AC092266.1-201ENST00000610958 165 ntBASIC5.16□□□□□ -1.58
RFX4Q33E94 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC5.16□□□□□ -1.58
RFX4Q33E94 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC5.16□□□□□ -1.58
RFX4Q33E94 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
RFX4Q33E94 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC5.16□□□□□ -1.58
RFX4Q33E94 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
RFX4Q33E94 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
RFX4Q33E94 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
RFX4Q33E94 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC5.16□□□□□ -1.58
RFX4Q33E94 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
RFX4Q33E94 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
RFX4Q33E94 EEF1A1P14-201ENST00000421195 1376 ntBASIC5.16□□□□□ -1.58
RFX4Q33E94 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
RFX4Q33E94 LINC00615-201ENST00000546725 1406 ntTSL 2 BASIC5.15□□□□□ -1.58
RFX4Q33E94 AL390726.6-201ENST00000637760 1654 ntTSL 5 BASIC5.15□□□□□ -1.58
RFX4Q33E94 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
RFX4Q33E94 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC5.15□□□□□ -1.58
RFX4Q33E94 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC5.15□□□□□ -1.58
RFX4Q33E94 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC5.15□□□□□ -1.58
RFX4Q33E94 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC5.15□□□□□ -1.58
RFX4Q33E94 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC5.15□□□□□ -1.58
RFX4Q33E94 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
RFX4Q33E94 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
RFX4Q33E94 OR1L4-201ENST00000259466 936 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
RFX4Q33E94 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
RFX4Q33E94 RNA5SP232-201ENST00000364144 119 ntBASIC5.15□□□□□ -1.59
RFX4Q33E94 AC007618.1-201ENST00000366455 732 ntBASIC5.15□□□□□ -1.59
RFX4Q33E94 TRAV35-201ENST00000390462 330 ntBASIC5.15□□□□□ -1.59
RFX4Q33E94 RNU6-233P-201ENST00000410845 141 ntBASIC5.15□□□□□ -1.59
RFX4Q33E94 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC5.15□□□□□ -1.59
RFX4Q33E94 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC5.15□□□□□ -1.59
RFX4Q33E94 AC017019.1-201ENST00000426129 261 ntBASIC5.15□□□□□ -1.59
RFX4Q33E94 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
RFX4Q33E94 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC5.15□□□□□ -1.59
RFX4Q33E94 PNKDP1-201ENST00000435914 430 ntBASIC5.15□□□□□ -1.59
RFX4Q33E94 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC5.15□□□□□ -1.59
RFX4Q33E94 VN1R110P-201ENST00000438988 971 ntBASIC5.15□□□□□ -1.59
RFX4Q33E94 TIMM8BP2-201ENST00000445940 251 ntBASIC5.15□□□□□ -1.59
RFX4Q33E94 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC5.15□□□□□ -1.59
RFX4Q33E94 AL358876.1-201ENST00000453364 1075 ntBASIC5.15□□□□□ -1.59
RFX4Q33E94 AC009963.3-201ENST00000458090 486 ntBASIC5.15□□□□□ -1.59
RFX4Q33E94 SH3GLB1-202ENST00000482504 1199 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
RFX4Q33E94 RN7SL57P-201ENST00000493687 290 ntBASIC5.15□□□□□ -1.59
RFX4Q33E94 RPS24P16-201ENST00000497294 392 ntBASIC5.15□□□□□ -1.59
RFX4Q33E94 LINC02374-201ENST00000503637 743 ntTSL 3 BASIC5.15□□□□□ -1.59
RFX4Q33E94 EIF3KP3-201ENST00000514461 639 ntBASIC5.15□□□□□ -1.59
RFX4Q33E94 AP003396.4-201ENST00000527574 265 ntBASIC5.15□□□□□ -1.59
RFX4Q33E94 AC006530.1-201ENST00000555980 571 ntBASIC5.15□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 159.2 ms