Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC6.51□□□□□ -1.37
SHROOM1Q2M3G4 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC6.51□□□□□ -1.37
SHROOM1Q2M3G4 MAPK10-350ENST00000641777 965 ntBASIC6.51□□□□□ -1.37
SHROOM1Q2M3G4 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
SHROOM1Q2M3G4 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC6.51□□□□□ -1.37
SHROOM1Q2M3G4 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
SHROOM1Q2M3G4 OR2AG1-202ENST00000641258 6993 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
SHROOM1Q2M3G4 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
SHROOM1Q2M3G4 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
SHROOM1Q2M3G4 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC6.51□□□□□ -1.37
SHROOM1Q2M3G4 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
SHROOM1Q2M3G4 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
SHROOM1Q2M3G4 CACNA1E-204ENST00000367567 14757 ntAPPRIS ALT2 TSL 5 BASIC6.51□□□□□ -1.37
SHROOM1Q2M3G4 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC6.51□□□□□ -1.37
SHROOM1Q2M3G4 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
SHROOM1Q2M3G4 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
SHROOM1Q2M3G4 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC6.51□□□□□ -1.37
SHROOM1Q2M3G4 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
SHROOM1Q2M3G4 ZNF101P1-201ENST00000435701 1720 ntBASIC6.5□□□□□ -1.37
SHROOM1Q2M3G4 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC6.5□□□□□ -1.37
SHROOM1Q2M3G4 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
SHROOM1Q2M3G4 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC6.5□□□□□ -1.37
SHROOM1Q2M3G4 ZNF24-201ENST00000261332 6307 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
SHROOM1Q2M3G4 GDA-209ENST00000545168 5362 ntTSL 2 BASIC6.5□□□□□ -1.37
SHROOM1Q2M3G4 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
SHROOM1Q2M3G4 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
SHROOM1Q2M3G4 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC6.5□□□□□ -1.37
SHROOM1Q2M3G4 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
SHROOM1Q2M3G4 WFDC11-201ENST00000324384 614 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
SHROOM1Q2M3G4 CDC123-202ENST00000378900 933 ntTSL 5 BASIC6.5□□□□□ -1.37
SHROOM1Q2M3G4 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC6.5□□□□□ -1.37
SHROOM1Q2M3G4 SLC35E1P1-201ENST00000419313 864 ntBASIC6.5□□□□□ -1.37
SHROOM1Q2M3G4 AC022535.1-201ENST00000420082 691 ntTSL 3 BASIC6.5□□□□□ -1.37
SHROOM1Q2M3G4 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC6.5□□□□□ -1.37
SHROOM1Q2M3G4 AL133325.1-201ENST00000421090 382 ntBASIC6.5□□□□□ -1.37
SHROOM1Q2M3G4 CRIP1P1-201ENST00000427567 185 ntBASIC6.5□□□□□ -1.37
SHROOM1Q2M3G4 AC013410.1-201ENST00000436223 1232 ntBASIC6.5□□□□□ -1.37
SHROOM1Q2M3G4 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC6.5□□□□□ -1.37
SHROOM1Q2M3G4 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC6.5□□□□□ -1.37
SHROOM1Q2M3G4 RPS21P4-201ENST00000487122 248 ntBASIC6.5□□□□□ -1.37
SHROOM1Q2M3G4 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
SHROOM1Q2M3G4 RN7SKP99-201ENST00000517028 307 ntBASIC6.5□□□□□ -1.37
SHROOM1Q2M3G4 LINC02055-205ENST00000521090 774 ntTSL 3 BASIC6.5□□□□□ -1.37
SHROOM1Q2M3G4 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC6.5□□□□□ -1.37
SHROOM1Q2M3G4 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC6.5□□□□□ -1.37
SHROOM1Q2M3G4 AC127381.1-201ENST00000555979 939 ntBASIC6.5□□□□□ -1.37
SHROOM1Q2M3G4 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC6.5□□□□□ -1.37
SHROOM1Q2M3G4 AP005403.1-201ENST00000579720 229 ntBASIC6.5□□□□□ -1.37
SHROOM1Q2M3G4 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC6.5□□□□□ -1.37
SHROOM1Q2M3G4 AL513327.3-201ENST00000602618 469 ntBASIC6.5□□□□□ -1.37
SHROOM1Q2M3G4 AC109583.2-201ENST00000617367 129 ntBASIC6.5□□□□□ -1.37
SHROOM1Q2M3G4 AC132825.8-201ENST00000640783 297 ntBASIC6.5□□□□□ -1.37
SHROOM1Q2M3G4 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC6.5□□□□□ -1.37
SHROOM1Q2M3G4 HTR2A-202ENST00000542664 5429 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
SHROOM1Q2M3G4 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
SHROOM1Q2M3G4 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC6.5□□□□□ -1.37
SHROOM1Q2M3G4 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC6.5□□□□□ -1.37
SHROOM1Q2M3G4 AC053481.2-202ENST00000582394 1500 ntBASIC6.5□□□□□ -1.37
SHROOM1Q2M3G4 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC6.49□□□□□ -1.37
SHROOM1Q2M3G4 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC6.49□□□□□ -1.37
SHROOM1Q2M3G4 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC6.49□□□□□ -1.37
SHROOM1Q2M3G4 PDE4D-226ENST00000546160 7690 ntTSL 5 BASIC6.49□□□□□ -1.37
SHROOM1Q2M3G4 RN7SKP6-201ENST00000364795 319 ntBASIC6.49□□□□□ -1.37
SHROOM1Q2M3G4 AL451142.1-201ENST00000375867 775 ntBASIC6.49□□□□□ -1.37
SHROOM1Q2M3G4 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
SHROOM1Q2M3G4 MIR223-201ENST00000385204 110 ntBASIC6.49□□□□□ -1.37
SHROOM1Q2M3G4 AL645927.1-201ENST00000396783 406 ntBASIC6.49□□□□□ -1.37
SHROOM1Q2M3G4 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC6.49□□□□□ -1.37
SHROOM1Q2M3G4 METTL15P3-201ENST00000415522 1221 ntBASIC6.49□□□□□ -1.37
SHROOM1Q2M3G4 AL445190.1-201ENST00000416448 288 ntTSL 5 BASIC6.49□□□□□ -1.37
SHROOM1Q2M3G4 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC6.49□□□□□ -1.37
SHROOM1Q2M3G4 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC6.49□□□□□ -1.37
SHROOM1Q2M3G4 PRUNEP1-201ENST00000425846 705 ntBASIC6.49□□□□□ -1.37
SHROOM1Q2M3G4 AC005033.1-201ENST00000428904 813 ntBASIC6.49□□□□□ -1.37
SHROOM1Q2M3G4 AC079080.1-201ENST00000479841 822 ntBASIC6.49□□□□□ -1.37
SHROOM1Q2M3G4 RN7SKP253-201ENST00000516424 309 ntBASIC6.49□□□□□ -1.37
SHROOM1Q2M3G4 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC6.49□□□□□ -1.37
SHROOM1Q2M3G4 HAUS8P1-201ENST00000549005 542 ntBASIC6.49□□□□□ -1.37
SHROOM1Q2M3G4 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC6.49□□□□□ -1.37
SHROOM1Q2M3G4 AC004825.1-201ENST00000555068 586 ntBASIC6.49□□□□□ -1.37
SHROOM1Q2M3G4 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC6.49□□□□□ -1.37
SHROOM1Q2M3G4 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC6.49□□□□□ -1.37
SHROOM1Q2M3G4 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC6.49□□□□□ -1.37
SHROOM1Q2M3G4 RPSAP73-201ENST00000614820 330 ntBASIC6.49□□□□□ -1.37
SHROOM1Q2M3G4 AF117829.2-201ENST00000619538 361 ntBASIC6.49□□□□□ -1.37
SHROOM1Q2M3G4 MIR6730-201ENST00000622213 67 ntBASIC6.49□□□□□ -1.37
SHROOM1Q2M3G4 AL359955.1-201ENST00000455242 3275 ntBASIC6.49□□□□□ -1.37
SHROOM1Q2M3G4 NAMPTP1-201ENST00000440465 2514 ntBASIC6.49□□□□□ -1.37
SHROOM1Q2M3G4 NABP1-204ENST00000410026 11521 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
SHROOM1Q2M3G4 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
SHROOM1Q2M3G4 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
SHROOM1Q2M3G4 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC6.49□□□□□ -1.37
SHROOM1Q2M3G4 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
SHROOM1Q2M3G4 CR383656.5-201ENST00000547616 1340 ntBASIC6.49□□□□□ -1.37
SHROOM1Q2M3G4 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
SHROOM1Q2M3G4 DNAL1-202ENST00000553645 8404 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
SHROOM1Q2M3G4 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC6.48□□□□□ -1.37
SHROOM1Q2M3G4 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
SHROOM1Q2M3G4 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC6.48□□□□□ -1.37
SHROOM1Q2M3G4 RNU6-673P-201ENST00000365084 104 ntBASIC6.48□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 159.2 ms