Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 AC093166.3-201ENST00000448785 303 ntBASIC4.32□□□□□ -1.72
HIST1H1AQ02539 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC4.32□□□□□ -1.72
HIST1H1AQ02539 TPT1P1-201ENST00000458495 518 ntBASIC4.32□□□□□ -1.72
HIST1H1AQ02539 AC068228.1-201ENST00000461723 211 ntBASIC4.32□□□□□ -1.72
HIST1H1AQ02539 RPS23P2-201ENST00000463671 415 ntBASIC4.32□□□□□ -1.72
HIST1H1AQ02539 AC023194.2-201ENST00000465398 406 ntBASIC4.32□□□□□ -1.72
HIST1H1AQ02539 PSAT1P4-201ENST00000466500 526 ntBASIC4.32□□□□□ -1.72
HIST1H1AQ02539 AC090589.1-201ENST00000473109 362 ntBASIC4.32□□□□□ -1.72
HIST1H1AQ02539 AC008413.2-201ENST00000507398 342 ntTSL 3 BASIC4.32□□□□□ -1.72
HIST1H1AQ02539 AC018797.1-201ENST00000510791 255 ntBASIC4.32□□□□□ -1.72
HIST1H1AQ02539 AC021146.10-201ENST00000515628 706 ntBASIC4.32□□□□□ -1.72
HIST1H1AQ02539 RNU4ATAC18P-201ENST00000516179 126 ntBASIC4.32□□□□□ -1.72
HIST1H1AQ02539 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC4.32□□□□□ -1.72
HIST1H1AQ02539 AC090155.1-201ENST00000520800 407 ntTSL 3 BASIC4.32□□□□□ -1.72
HIST1H1AQ02539 AP003031.2-204ENST00000527219 567 ntTSL 4 BASIC4.32□□□□□ -1.72
HIST1H1AQ02539 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC4.32□□□□□ -1.72
HIST1H1AQ02539 AC023906.3-201ENST00000559825 874 ntTSL 5 BASIC4.32□□□□□ -1.72
HIST1H1AQ02539 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC4.32□□□□□ -1.72
HIST1H1AQ02539 AC090236.2-201ENST00000587933 1101 ntBASIC4.32□□□□□ -1.72
HIST1H1AQ02539 AC124916.2-201ENST00000604416 224 ntBASIC4.32□□□□□ -1.72
HIST1H1AQ02539 FAM27E4-201ENST00000605259 342 ntBASIC4.32□□□□□ -1.72
HIST1H1AQ02539 AL136131.3-201ENST00000607600 188 ntBASIC4.32□□□□□ -1.72
HIST1H1AQ02539 AC083798.2-201ENST00000608756 1152 ntTSL 4 BASIC4.32□□□□□ -1.72
HIST1H1AQ02539 FRG1EP-201ENST00000634469 770 ntBASIC4.32□□□□□ -1.72
HIST1H1AQ02539 AC111152.1-202ENST00000635848 339 ntBASIC4.32□□□□□ -1.72
HIST1H1AQ02539 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC4.32□□□□□ -1.72
HIST1H1AQ02539 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
HIST1H1AQ02539 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC4.32□□□□□ -1.72
HIST1H1AQ02539 AL020995.1-201ENST00000427524 1680 ntTSL 2 BASIC4.32□□□□□ -1.72
HIST1H1AQ02539 AC025574.1-201ENST00000554784 1653 ntBASIC4.32□□□□□ -1.72
HIST1H1AQ02539 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC4.32□□□□□ -1.72
HIST1H1AQ02539 ITGB1-201ENST00000302278 3640 ntAPPRIS P2 TSL 1 (best) BASIC4.32□□□□□ -1.72
HIST1H1AQ02539 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
HIST1H1AQ02539 AC104623.2-202ENST00000623477 4002 ntBASIC4.31□□□□□ -1.72
HIST1H1AQ02539 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
HIST1H1AQ02539 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
HIST1H1AQ02539 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC4.31□□□□□ -1.72
HIST1H1AQ02539 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
HIST1H1AQ02539 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC4.31□□□□□ -1.72
HIST1H1AQ02539 NEAT1-202ENST00000501122 22743 ntBASIC4.31□□□□□ -1.72
HIST1H1AQ02539 EEF1A1P33-201ENST00000554413 1362 ntBASIC4.31□□□□□ -1.72
HIST1H1AQ02539 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
HIST1H1AQ02539 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
HIST1H1AQ02539 ZNF652P1-201ENST00000442420 1309 ntBASIC4.31□□□□□ -1.72
HIST1H1AQ02539 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC4.31□□□□□ -1.72
HIST1H1AQ02539 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC4.31□□□□□ -1.72
HIST1H1AQ02539 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC4.31□□□□□ -1.72
HIST1H1AQ02539 GLYAT-201ENST00000278400 1150 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
HIST1H1AQ02539 OR1D2-201ENST00000331459 939 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
HIST1H1AQ02539 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC4.31□□□□□ -1.72
HIST1H1AQ02539 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
HIST1H1AQ02539 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
HIST1H1AQ02539 RN7SKP286-201ENST00000410894 299 ntBASIC4.31□□□□□ -1.72
HIST1H1AQ02539 AL355581.1-201ENST00000415964 830 ntTSL 2 BASIC4.31□□□□□ -1.72
HIST1H1AQ02539 AL669841.1-201ENST00000425723 558 ntTSL 2 BASIC4.31□□□□□ -1.72
HIST1H1AQ02539 NPM1P33-201ENST00000438918 872 ntBASIC4.31□□□□□ -1.72
HIST1H1AQ02539 EIF5AP4-201ENST00000441206 465 ntBASIC4.31□□□□□ -1.72
HIST1H1AQ02539 CFL1P4-201ENST00000451536 498 ntBASIC4.31□□□□□ -1.72
HIST1H1AQ02539 GEMIN2P1-201ENST00000454246 752 ntBASIC4.31□□□□□ -1.72
HIST1H1AQ02539 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC4.31□□□□□ -1.72
HIST1H1AQ02539 AC093166.4-201ENST00000457867 318 ntBASIC4.31□□□□□ -1.72
HIST1H1AQ02539 AP000942.1-201ENST00000463969 747 ntBASIC4.31□□□□□ -1.72
HIST1H1AQ02539 NPM1P29-201ENST00000483112 803 ntBASIC4.31□□□□□ -1.72
HIST1H1AQ02539 RABGAP1L-216ENST00000486220 772 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
HIST1H1AQ02539 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC4.31□□□□□ -1.72
HIST1H1AQ02539 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC4.31□□□□□ -1.72
HIST1H1AQ02539 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC4.31□□□□□ -1.72
HIST1H1AQ02539 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC4.31□□□□□ -1.72
HIST1H1AQ02539 AC011632.2-201ENST00000520696 738 ntTSL 3 BASIC4.31□□□□□ -1.72
HIST1H1AQ02539 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC4.31□□□□□ -1.72
HIST1H1AQ02539 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC4.31□□□□□ -1.72
HIST1H1AQ02539 CCND2-AS2-201ENST00000537370 495 ntTSL 4 BASIC4.31□□□□□ -1.72
HIST1H1AQ02539 AL138974.1-201ENST00000551227 741 ntTSL 5 BASIC4.31□□□□□ -1.72
HIST1H1AQ02539 AC007956.1-201ENST00000555623 542 ntBASIC4.31□□□□□ -1.72
HIST1H1AQ02539 AC022872.1-201ENST00000568391 781 ntTSL 2 BASIC4.31□□□□□ -1.72
HIST1H1AQ02539 AC087501.3-201ENST00000576477 513 ntTSL 5 BASIC4.31□□□□□ -1.72
HIST1H1AQ02539 AC073575.2-201ENST00000614212 627 ntBASIC4.31□□□□□ -1.72
HIST1H1AQ02539 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC4.31□□□□□ -1.72
HIST1H1AQ02539 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC4.31□□□□□ -1.72
HIST1H1AQ02539 STX3-208ENST00000641815 3236 ntBASIC4.31□□□□□ -1.72
HIST1H1AQ02539 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
HIST1H1AQ02539 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC4.31□□□□□ -1.72
HIST1H1AQ02539 ANAPC1P1-201ENST00000426186 2145 ntBASIC4.31□□□□□ -1.72
HIST1H1AQ02539 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC4.31□□□□□ -1.72
HIST1H1AQ02539 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC4.31□□□□□ -1.72
HIST1H1AQ02539 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC4.31□□□□□ -1.72
HIST1H1AQ02539 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
HIST1H1AQ02539 AC073136.1-201ENST00000449426 2884 ntBASIC4.31□□□□□ -1.72
HIST1H1AQ02539 AC104964.3-201ENST00000606115 2860 ntBASIC4.31□□□□□ -1.72
HIST1H1AQ02539 AC027088.4-201ENST00000611559 1947 ntBASIC4.31□□□□□ -1.72
HIST1H1AQ02539 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC4.3□□□□□ -1.72
HIST1H1AQ02539 AC104966.1-201ENST00000467010 1464 ntBASIC4.3□□□□□ -1.72
HIST1H1AQ02539 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
HIST1H1AQ02539 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
HIST1H1AQ02539 LINC00615-201ENST00000546725 1406 ntTSL 2 BASIC4.3□□□□□ -1.72
HIST1H1AQ02539 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
HIST1H1AQ02539 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC4.3□□□□□ -1.72
HIST1H1AQ02539 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
HIST1H1AQ02539 AC027228.2-201ENST00000567141 2154 ntBASIC4.3□□□□□ -1.72
HIST1H1AQ02539 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC4.3□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 70.3 ms