Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC5.38□□□□□ -1.55
VSX2P58304 AC016839.1-201ENST00000578162 867 ntBASIC5.38□□□□□ -1.55
VSX2P58304 AL589674.2-201ENST00000604304 337 ntBASIC5.38□□□□□ -1.55
VSX2P58304 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC5.38□□□□□ -1.55
VSX2P58304 HOTTIP_3.1-201ENST00000619957 337 ntBASIC5.38□□□□□ -1.55
VSX2P58304 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
VSX2P58304 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC5.38□□□□□ -1.55
VSX2P58304 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC5.38□□□□□ -1.55
VSX2P58304 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
VSX2P58304 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
VSX2P58304 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
VSX2P58304 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
VSX2P58304 AC027279.4-201ENST00000624371 2072 ntBASIC5.38□□□□□ -1.55
VSX2P58304 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
VSX2P58304 ADAM24P-201ENST00000398655 2101 ntBASIC5.38□□□□□ -1.55
VSX2P58304 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
VSX2P58304 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
VSX2P58304 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC5.37□□□□□ -1.55
VSX2P58304 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC5.37□□□□□ -1.55
VSX2P58304 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
VSX2P58304 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC5.37□□□□□ -1.55
VSX2P58304 AL355488.2-201ENST00000609909 2850 ntBASIC5.37□□□□□ -1.55
VSX2P58304 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC5.37□□□□□ -1.55
VSX2P58304 RNA5SP453-201ENST00000362503 119 ntBASIC5.37□□□□□ -1.55
VSX2P58304 SNORA51.1-201ENST00000363243 140 ntBASIC5.37□□□□□ -1.55
VSX2P58304 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC5.37□□□□□ -1.55
VSX2P58304 FAIM-204ENST00000393035 946 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
VSX2P58304 DNAJA1P3-201ENST00000399417 1194 ntBASIC5.37□□□□□ -1.55
VSX2P58304 GAPDHP42-201ENST00000406848 981 ntBASIC5.37□□□□□ -1.55
VSX2P58304 EIF4A1P7-201ENST00000421800 1220 ntBASIC5.37□□□□□ -1.55
VSX2P58304 AC093719.1-201ENST00000480427 441 ntBASIC5.37□□□□□ -1.55
VSX2P58304 RN7SL466P-201ENST00000497546 295 ntBASIC5.37□□□□□ -1.55
VSX2P58304 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC5.37□□□□□ -1.55
VSX2P58304 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC5.37□□□□□ -1.55
VSX2P58304 AC021146.10-201ENST00000515628 706 ntBASIC5.37□□□□□ -1.55
VSX2P58304 RNA5SP362-201ENST00000516048 118 ntBASIC5.37□□□□□ -1.55
VSX2P58304 PMP2-202ENST00000519260 1264 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
VSX2P58304 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
VSX2P58304 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC5.37□□□□□ -1.55
VSX2P58304 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC5.37□□□□□ -1.55
VSX2P58304 DHFRP1-201ENST00000579682 559 ntBASIC5.37□□□□□ -1.55
VSX2P58304 MIR4311-201ENST00000580794 100 ntBASIC5.37□□□□□ -1.55
VSX2P58304 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC5.37□□□□□ -1.55
VSX2P58304 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC5.37□□□□□ -1.55
VSX2P58304 PACRG-210ENST00000611387 279 ntTSL 5 BASIC5.37□□□□□ -1.55
VSX2P58304 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
VSX2P58304 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC5.37□□□□□ -1.55
VSX2P58304 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
VSX2P58304 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
VSX2P58304 RALGAPA1P1-201ENST00000443361 6232 ntBASIC5.37□□□□□ -1.55
VSX2P58304 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC5.37□□□□□ -1.55
VSX2P58304 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC5.37□□□□□ -1.55
VSX2P58304 AC012078.1-201ENST00000405035 1646 ntBASIC5.37□□□□□ -1.55
VSX2P58304 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC5.37□□□□□ -1.55
VSX2P58304 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC5.37□□□□□ -1.55
VSX2P58304 AC004158.1-201ENST00000564508 4319 ntBASIC5.37□□□□□ -1.55
VSX2P58304 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
VSX2P58304 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
VSX2P58304 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
VSX2P58304 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
VSX2P58304 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
VSX2P58304 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
VSX2P58304 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC5.36□□□□□ -1.55
VSX2P58304 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
VSX2P58304 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
VSX2P58304 AC125336.1-201ENST00000508893 2827 ntBASIC5.36□□□□□ -1.55
VSX2P58304 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
VSX2P58304 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC5.36□□□□□ -1.55
VSX2P58304 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
VSX2P58304 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
VSX2P58304 AC096921.1-201ENST00000411661 375 ntBASIC5.36□□□□□ -1.55
VSX2P58304 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC5.36□□□□□ -1.55
VSX2P58304 RNGTTP1-201ENST00000420965 728 ntBASIC5.36□□□□□ -1.55
VSX2P58304 TMEM183AP1-205ENST00000432739 290 ntBASIC5.36□□□□□ -1.55
VSX2P58304 AL390119.1-201ENST00000440329 312 ntBASIC5.36□□□□□ -1.55
VSX2P58304 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
VSX2P58304 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
VSX2P58304 VDAC2P4-201ENST00000452925 711 ntBASIC5.36□□□□□ -1.55
VSX2P58304 RPL7L1P4-201ENST00000513004 707 ntBASIC5.36□□□□□ -1.55
VSX2P58304 LINC02506-201ENST00000513211 734 ntTSL 3 BASIC5.36□□□□□ -1.55
VSX2P58304 LDHBP3-201ENST00000514909 822 ntBASIC5.36□□□□□ -1.55
VSX2P58304 AC079296.1-202ENST00000521394 960 ntTSL 4 BASIC5.36□□□□□ -1.55
VSX2P58304 ULK4P1-201ENST00000564495 875 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
VSX2P58304 ULK4P2-204ENST00000569682 798 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
VSX2P58304 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC5.36□□□□□ -1.55
VSX2P58304 MIR1273E-201ENST00000581165 102 ntBASIC5.36□□□□□ -1.55
VSX2P58304 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC5.36□□□□□ -1.55
VSX2P58304 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC5.36□□□□□ -1.55
VSX2P58304 MIR6768-201ENST00000610734 72 ntBASIC5.36□□□□□ -1.55
VSX2P58304 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC5.36□□□□□ -1.55
VSX2P58304 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
VSX2P58304 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC5.36□□□□□ -1.55
VSX2P58304 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC5.36□□□□□ -1.55
VSX2P58304 AP000473.2-201ENST00000602659 1537 ntBASIC5.36□□□□□ -1.55
VSX2P58304 CLEC2B-201ENST00000228438 1700 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
VSX2P58304 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
VSX2P58304 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
VSX2P58304 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
VSX2P58304 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
VSX2P58304 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 67 ms