Protein–RNA interactions for Protein: P56524

HDAC4, Histone deacetylase 4, humanhuman

Predictions only

Length 1,084 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4P56524 AC008063.2-201ENST00000432251 619 ntTSL 2 BASIC6.1□□□□□ -1.43
HDAC4P56524 AL392003.1-201ENST00000434394 243 ntBASIC6.1□□□□□ -1.43
HDAC4P56524 TUBB4BP6-201ENST00000437576 479 ntBASIC6.1□□□□□ -1.43
HDAC4P56524 AC096775.1-201ENST00000437724 448 ntBASIC6.1□□□□□ -1.43
HDAC4P56524 RAB9AP5-201ENST00000437794 597 ntBASIC6.1□□□□□ -1.43
HDAC4P56524 RAB9AP2-201ENST00000443911 597 ntBASIC6.1□□□□□ -1.43
HDAC4P56524 MIS18A-AS1-201ENST00000453549 769 ntTSL 5 BASIC6.1□□□□□ -1.43
HDAC4P56524 FRG2FP-204ENST00000453982 852 ntBASIC6.1□□□□□ -1.43
HDAC4P56524 C1DP3-201ENST00000455013 423 ntBASIC6.1□□□□□ -1.43
HDAC4P56524 AC093166.4-201ENST00000457867 318 ntBASIC6.1□□□□□ -1.43
HDAC4P56524 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC6.1□□□□□ -1.43
HDAC4P56524 FOXD1-AS1-201ENST00000514661 424 ntTSL 3 BASIC6.1□□□□□ -1.43
HDAC4P56524 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC6.1□□□□□ -1.43
HDAC4P56524 WBP1LP3-201ENST00000523033 208 ntBASIC6.1□□□□□ -1.43
HDAC4P56524 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC6.1□□□□□ -1.43
HDAC4P56524 CASP5-209ENST00000531367 879 ntTSL 5 BASIC6.1□□□□□ -1.43
HDAC4P56524 PCNAP4-201ENST00000532690 730 ntBASIC6.1□□□□□ -1.43
HDAC4P56524 SNHG1-205ENST00000537869 1038 ntTSL 3 BASIC6.1□□□□□ -1.43
HDAC4P56524 AC068305.2-201ENST00000550567 1205 ntBASIC6.1□□□□□ -1.43
HDAC4P56524 LINC00911-201ENST00000555272 546 ntTSL 2 BASIC6.1□□□□□ -1.43
HDAC4P56524 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC6.1□□□□□ -1.43
HDAC4P56524 TMF1P1-201ENST00000576058 373 ntBASIC6.1□□□□□ -1.43
HDAC4P56524 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC6.1□□□□□ -1.43
HDAC4P56524 AC073575.2-201ENST00000614212 627 ntBASIC6.1□□□□□ -1.43
HDAC4P56524 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
HDAC4P56524 AC025262.3-201ENST00000623666 360 ntBASIC6.1□□□□□ -1.43
HDAC4P56524 AC106730.3-201ENST00000624568 641 ntBASIC6.1□□□□□ -1.43
HDAC4P56524 AC004808.2-201ENST00000627965 773 ntBASIC6.1□□□□□ -1.43
HDAC4P56524 HPVC1-201ENST00000629899 1198 ntBASIC6.1□□□□□ -1.43
HDAC4P56524 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC6.1□□□□□ -1.43
HDAC4P56524 AC073869.7-201ENST00000640874 297 ntBASIC6.1□□□□□ -1.43
HDAC4P56524 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC6.1□□□□□ -1.43
HDAC4P56524 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC6.1□□□□□ -1.43
HDAC4P56524 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC6.1□□□□□ -1.43
HDAC4P56524 CPS1-IT1-201ENST00000628368 2306 ntBASIC6.1□□□□□ -1.43
HDAC4P56524 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
HDAC4P56524 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC6.1□□□□□ -1.43
HDAC4P56524 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC6.1□□□□□ -1.43
HDAC4P56524 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
HDAC4P56524 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC6.1□□□□□ -1.43
HDAC4P56524 CDC16-202ENST00000252458 1991 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
HDAC4P56524 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
HDAC4P56524 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
HDAC4P56524 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
HDAC4P56524 AC109446.4-201ENST00000623235 2755 ntBASIC6.09□□□□□ -1.43
HDAC4P56524 SAMM50P1-201ENST00000455403 1399 ntBASIC6.09□□□□□ -1.43
HDAC4P56524 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC6.09□□□□□ -1.43
HDAC4P56524 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
HDAC4P56524 SLC9B1P1-201ENST00000331172 1337 ntBASIC6.09□□□□□ -1.43
HDAC4P56524 CASP5-208ENST00000526056 1344 ntTSL 5 BASIC6.09□□□□□ -1.43
HDAC4P56524 AC092451.3-201ENST00000625067 1343 ntBASIC6.09□□□□□ -1.43
HDAC4P56524 CLEC2D-202ENST00000261340 935 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
HDAC4P56524 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC6.09□□□□□ -1.43
HDAC4P56524 FIG4-202ENST00000368941 791 ntTSL 3 BASIC6.09□□□□□ -1.43
HDAC4P56524 MIR7-1-201ENST00000384871 110 ntBASIC6.09□□□□□ -1.43
HDAC4P56524 RN7SKP29-201ENST00000410957 272 ntBASIC6.09□□□□□ -1.43
HDAC4P56524 RN7SKP17-201ENST00000411242 351 ntBASIC6.09□□□□□ -1.43
HDAC4P56524 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC6.09□□□□□ -1.43
HDAC4P56524 AC066692.1-201ENST00000421721 457 ntBASIC6.09□□□□□ -1.43
HDAC4P56524 AC000095.2-201ENST00000424407 768 ntTSL 2 BASIC6.09□□□□□ -1.43
HDAC4P56524 AC106901.1-201ENST00000425086 698 ntBASIC6.09□□□□□ -1.43
HDAC4P56524 AL590399.2-201ENST00000427536 309 ntBASIC6.09□□□□□ -1.43
HDAC4P56524 PCBP1-AS1-224ENST00000429599 1045 ntTSL 5 BASIC6.09□□□□□ -1.43
HDAC4P56524 RPL12P16-201ENST00000431098 498 ntBASIC6.09□□□□□ -1.43
HDAC4P56524 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC6.09□□□□□ -1.43
HDAC4P56524 AC023141.8-201ENST00000442554 208 ntBASIC6.09□□□□□ -1.43
HDAC4P56524 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC6.09□□□□□ -1.43
HDAC4P56524 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC6.09□□□□□ -1.43
HDAC4P56524 RSU1P1-201ENST00000453416 441 ntBASIC6.09□□□□□ -1.43
HDAC4P56524 SYPL1-205ENST00000470347 1193 ntTSL 3 BASIC6.09□□□□□ -1.43
HDAC4P56524 AL122020.1-201ENST00000472287 459 ntBASIC6.09□□□□□ -1.43
HDAC4P56524 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
HDAC4P56524 AC079080.1-201ENST00000479841 822 ntBASIC6.09□□□□□ -1.43
HDAC4P56524 AC006539.1-201ENST00000481419 501 ntBASIC6.09□□□□□ -1.43
HDAC4P56524 COL6A4P2-205ENST00000509855 506 ntBASIC6.09□□□□□ -1.43
HDAC4P56524 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC6.09□□□□□ -1.43
HDAC4P56524 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC6.09□□□□□ -1.43
HDAC4P56524 AC026688.1-201ENST00000520639 1168 ntBASIC6.09□□□□□ -1.43
HDAC4P56524 IGLV3-30-201ENST00000524362 298 ntBASIC6.09□□□□□ -1.43
HDAC4P56524 TRIM77BP-201ENST00000524985 1119 ntBASIC6.09□□□□□ -1.43
HDAC4P56524 AP004609.2-201ENST00000532177 190 ntBASIC6.09□□□□□ -1.43
HDAC4P56524 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC6.09□□□□□ -1.43
HDAC4P56524 AL121594.2-201ENST00000541658 472 ntBASIC6.09□□□□□ -1.43
HDAC4P56524 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC6.09□□□□□ -1.43
HDAC4P56524 AC019322.1-201ENST00000571869 389 ntBASIC6.09□□□□□ -1.43
HDAC4P56524 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC6.09□□□□□ -1.43
HDAC4P56524 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC6.09□□□□□ -1.43
HDAC4P56524 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC6.09□□□□□ -1.43
HDAC4P56524 OR7M1P-201ENST00000608946 533 ntBASIC6.09□□□□□ -1.43
HDAC4P56524 AC104307.1-201ENST00000616142 196 ntBASIC6.09□□□□□ -1.43
HDAC4P56524 MIR6729-201ENST00000618194 65 ntBASIC6.09□□□□□ -1.43
HDAC4P56524 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC6.09□□□□□ -1.43
HDAC4P56524 AC000095.2-202ENST00000637415 154 ntBASIC6.09□□□□□ -1.43
HDAC4P56524 AD000090.1-201ENST00000638356 494 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
HDAC4P56524 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC6.09□□□□□ -1.43
HDAC4P56524 AC112255.1-201ENST00000624070 2493 ntBASIC6.09□□□□□ -1.43
HDAC4P56524 MFSD8-239ENST00000641590 2479 ntBASIC6.09□□□□□ -1.43
HDAC4P56524 AL359955.1-201ENST00000455242 3275 ntBASIC6.09□□□□□ -1.43
HDAC4P56524 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC6.09□□□□□ -1.43
HDAC4P56524 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC6.09□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 105.8 ms