Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
NUP98P52948 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC6.67□□□□□ -1.34
NUP98P52948 MFAP3L-203ENST00000393704 5827 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
NUP98P52948 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
NUP98P52948 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC6.66□□□□□ -1.34
NUP98P52948 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC6.66□□□□□ -1.34
NUP98P52948 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC6.66□□□□□ -1.34
NUP98P52948 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC6.66□□□□□ -1.34
NUP98P52948 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC6.66□□□□□ -1.34
NUP98P52948 AC009597.2-201ENST00000604659 592 ntBASIC6.66□□□□□ -1.34
NUP98P52948 AC244107.2-201ENST00000611773 76 ntBASIC6.66□□□□□ -1.34
NUP98P52948 LINC02035-201ENST00000610128 5476 ntBASIC6.66□□□□□ -1.34
NUP98P52948 CTBS-202ENST00000370630 6600 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
NUP98P52948 AP004243.1-201ENST00000529108 1433 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
NUP98P52948 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC6.66□□□□□ -1.34
NUP98P52948 AC100757.1-201ENST00000616872 1835 ntBASIC6.66□□□□□ -1.34
NUP98P52948 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC6.66□□□□□ -1.34
NUP98P52948 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC6.66□□□□□ -1.34
NUP98P52948 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
NUP98P52948 AXDND1-201ENST00000367618 3642 ntAPPRIS P2 TSL 1 (best) BASIC6.66□□□□□ -1.34
NUP98P52948 PCDH15-231ENST00000617271 6425 ntAPPRIS P3 TSL 5 BASIC6.66□□□□□ -1.34
NUP98P52948 DLG2-211ENST00000426717 5927 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
NUP98P52948 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
NUP98P52948 ITSN1-206ENST00000381318 17015 ntAPPRIS P3 TSL 1 (best) BASIC6.66□□□□□ -1.34
NUP98P52948 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
NUP98P52948 GRAMD1B-207ENST00000529750 7723 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
NUP98P52948 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC6.66□□□□□ -1.34
NUP98P52948 AC104837.2-201ENST00000427236 424 ntBASIC6.66□□□□□ -1.34
NUP98P52948 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC6.66□□□□□ -1.34
NUP98P52948 AC092647.3-201ENST00000443044 633 ntBASIC6.66□□□□□ -1.34
NUP98P52948 AC091912.1-201ENST00000511351 248 ntBASIC6.66□□□□□ -1.34
NUP98P52948 HAPLN1-206ENST00000514416 1145 ntTSL 5 BASIC6.66□□□□□ -1.34
NUP98P52948 AC021006.3-201ENST00000530771 192 ntBASIC6.66□□□□□ -1.34
NUP98P52948 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
NUP98P52948 MIR6820-201ENST00000611508 62 ntBASIC6.66□□□□□ -1.34
NUP98P52948 AL627230.1-201ENST00000613077 211 ntBASIC6.66□□□□□ -1.34
NUP98P52948 AC073575.2-201ENST00000614212 627 ntBASIC6.66□□□□□ -1.34
NUP98P52948 AL591926.8-201ENST00000616876 211 ntBASIC6.66□□□□□ -1.34
NUP98P52948 AP003400.3-201ENST00000624904 346 ntBASIC6.66□□□□□ -1.34
NUP98P52948 MYO6-202ENST00000369977 5597 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
NUP98P52948 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC6.66□□□□□ -1.34
NUP98P52948 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC6.66□□□□□ -1.34
NUP98P52948 STAG1-201ENST00000236698 5951 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
NUP98P52948 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC6.65□□□□□ -1.34
NUP98P52948 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC6.65□□□□□ -1.34
NUP98P52948 PBX1-221ENST00000612123 6062 ntTSL 5 BASIC6.65□□□□□ -1.34
NUP98P52948 NIT2-201ENST00000394140 7289 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
NUP98P52948 AL035419.1-201ENST00000397037 564 ntBASIC6.65□□□□□ -1.34
NUP98P52948 LINC01593-201ENST00000424355 388 ntTSL 5 BASIC6.65□□□□□ -1.34
NUP98P52948 ARPP21-218ENST00000438071 1103 ntTSL 3 BASIC6.65□□□□□ -1.34
NUP98P52948 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC6.65□□□□□ -1.34
NUP98P52948 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC6.65□□□□□ -1.34
NUP98P52948 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
NUP98P52948 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC6.65□□□□□ -1.34
NUP98P52948 AC137768.1-201ENST00000549998 553 ntBASIC6.65□□□□□ -1.34
NUP98P52948 MIR6798-201ENST00000612887 67 ntBASIC6.65□□□□□ -1.34
NUP98P52948 NAA60-237ENST00000615865 326 ntTSL 5 BASIC6.65□□□□□ -1.34
NUP98P52948 PDE4D-226ENST00000546160 7690 ntTSL 5 BASIC6.65□□□□□ -1.35
NUP98P52948 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC6.65□□□□□ -1.35
NUP98P52948 SH3D19-210ENST00000514152 5107 ntAPPRIS ALT1 TSL 2 BASIC6.65□□□□□ -1.35
NUP98P52948 LINC00282-202ENST00000627246 4008 ntAPPRIS P5 TSL 2 BASIC6.65□□□□□ -1.35
NUP98P52948 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
NUP98P52948 LAMA2-205ENST00000617695 9678 ntAPPRIS ALT2 TSL 5 BASIC6.65□□□□□ -1.35
NUP98P52948 LAMA2-206ENST00000618192 9687 ntAPPRIS ALT2 TSL 5 BASIC6.65□□□□□ -1.35
NUP98P52948 CDON-202ENST00000392693 9138 ntAPPRIS ALT2 TSL 1 (best) BASIC6.65□□□□□ -1.35
NUP98P52948 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
NUP98P52948 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC6.65□□□□□ -1.35
NUP98P52948 INTS6P1-201ENST00000504674 2530 ntBASIC6.65□□□□□ -1.35
NUP98P52948 BNC2-203ENST00000380672 12844 ntAPPRIS P2 TSL 2 BASIC6.64□□□□□ -1.35
NUP98P52948 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
NUP98P52948 RPL11P3-201ENST00000395256 523 ntBASIC6.64□□□□□ -1.35
NUP98P52948 PPIAP9-201ENST00000403866 498 ntBASIC6.64□□□□□ -1.35
NUP98P52948 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC6.64□□□□□ -1.35
NUP98P52948 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
NUP98P52948 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC6.64□□□□□ -1.35
NUP98P52948 KNOP1P3-201ENST00000446933 426 ntBASIC6.64□□□□□ -1.35
NUP98P52948 CASP12-208ENST00000448103 1071 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
NUP98P52948 RPL7P16-201ENST00000479738 738 ntBASIC6.64□□□□□ -1.35
NUP98P52948 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
NUP98P52948 AC004980.4-201ENST00000513375 203 ntBASIC6.64□□□□□ -1.35
NUP98P52948 SNORA26.10-201ENST00000516427 141 ntBASIC6.64□□□□□ -1.35
NUP98P52948 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC6.64□□□□□ -1.35
NUP98P52948 FCF1-203ENST00000553615 954 ntTSL 3 BASIC6.64□□□□□ -1.35
NUP98P52948 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC6.64□□□□□ -1.35
NUP98P52948 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC6.64□□□□□ -1.35
NUP98P52948 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC6.64□□□□□ -1.35
NUP98P52948 AC005377.1-201ENST00000605126 456 ntBASIC6.64□□□□□ -1.35
NUP98P52948 AL133406.3-201ENST00000606817 541 ntBASIC6.64□□□□□ -1.35
NUP98P52948 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
NUP98P52948 SERPINB11-205ENST00000544088 1846 ntAPPRIS P1 TSL 2 BASIC6.64□□□□□ -1.35
NUP98P52948 IRF5P1-201ENST00000504852 2164 ntBASIC6.64□□□□□ -1.35
NUP98P52948 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC6.64□□□□□ -1.35
NUP98P52948 AC092378.1-202ENST00000500117 2296 ntTSL 2 BASIC6.64□□□□□ -1.35
NUP98P52948 NDUFA4-201ENST00000339600 2130 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
NUP98P52948 UGT2B24P-201ENST00000514441 1597 ntBASIC6.64□□□□□ -1.35
NUP98P52948 AC114774.1-201ENST00000507410 1770 ntBASIC6.64□□□□□ -1.35
NUP98P52948 SUN3-203ENST00000412142 1448 ntTSL 5 BASIC6.64□□□□□ -1.35
NUP98P52948 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC6.64□□□□□ -1.35
NUP98P52948 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC6.64□□□□□ -1.35
NUP98P52948 ZNF766-201ENST00000439461 6298 ntAPPRIS P2 TSL 1 (best) BASIC6.64□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 118.3 ms