Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 TFP1-203ENST00000490470 561 ntTSL 4 BASIC3.96□□□□□ -1.78
CKS2P33552 NIFKP7-201ENST00000503365 834 ntBASIC3.96□□□□□ -1.78
CKS2P33552 LINC02114-201ENST00000503757 801 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
CKS2P33552 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC3.96□□□□□ -1.78
CKS2P33552 AC073648.3-201ENST00000504939 925 ntBASIC3.96□□□□□ -1.78
CKS2P33552 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC3.96□□□□□ -1.78
CKS2P33552 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC3.96□□□□□ -1.78
CKS2P33552 AC021678.3-201ENST00000517893 476 ntBASIC3.96□□□□□ -1.78
CKS2P33552 DACT3-AS1-202ENST00000525008 496 ntTSL 2 BASIC3.96□□□□□ -1.78
CKS2P33552 LRP4-AS1-202ENST00000531719 731 ntTSL 4 BASIC3.96□□□□□ -1.78
CKS2P33552 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC3.96□□□□□ -1.78
CKS2P33552 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
CKS2P33552 AC005244.1-201ENST00000582566 339 ntBASIC3.96□□□□□ -1.78
CKS2P33552 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC3.96□□□□□ -1.78
CKS2P33552 LINC01533-204ENST00000590719 435 ntTSL 5 BASIC3.96□□□□□ -1.78
CKS2P33552 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC3.96□□□□□ -1.78
CKS2P33552 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC3.96□□□□□ -1.78
CKS2P33552 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC3.96□□□□□ -1.78
CKS2P33552 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC3.96□□□□□ -1.78
CKS2P33552 Metazoa_SRP.35-201ENST00000611402 288 ntBASIC3.96□□□□□ -1.78
CKS2P33552 uc_338.33-201ENST00000614988 170 ntBASIC3.96□□□□□ -1.78
CKS2P33552 AC015574.1-202ENST00000616588 456 ntTSL 5 BASIC3.96□□□□□ -1.78
CKS2P33552 AC037198.3-201ENST00000616754 526 ntBASIC3.96□□□□□ -1.78
CKS2P33552 AP001642.1-201ENST00000624727 2117 ntBASIC3.96□□□□□ -1.78
CKS2P33552 AC244205.1-201ENST00000624935 705 ntTSL 2 BASIC3.96□□□□□ -1.78
CKS2P33552 LIPF-201ENST00000238983 1376 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
CKS2P33552 USP45-204ENST00000369233 2514 ntTSL 5 BASIC3.96□□□□□ -1.78
CKS2P33552 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.78
CKS2P33552 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
CKS2P33552 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.78
CKS2P33552 AL390726.6-201ENST00000637760 1654 ntTSL 5 BASIC3.96□□□□□ -1.78
CKS2P33552 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
CKS2P33552 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
CKS2P33552 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
CKS2P33552 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
CKS2P33552 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
CKS2P33552 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC3.96□□□□□ -1.78
CKS2P33552 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC3.96□□□□□ -1.78
CKS2P33552 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
CKS2P33552 AC063976.2-201ENST00000425667 3556 ntBASIC3.96□□□□□ -1.78
CKS2P33552 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
CKS2P33552 LINC00102-201ENST00000445785 1340 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
CKS2P33552 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC3.95□□□□□ -1.78
CKS2P33552 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
CKS2P33552 AC099654.3-201ENST00000447087 1546 ntBASIC3.95□□□□□ -1.78
CKS2P33552 ERVFRD-3-201ENST00000578561 1617 ntBASIC3.95□□□□□ -1.78
CKS2P33552 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
CKS2P33552 AC008627.1-201ENST00000517511 1704 ntBASIC3.95□□□□□ -1.78
CKS2P33552 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
CKS2P33552 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC3.95□□□□□ -1.78
CKS2P33552 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC3.95□□□□□ -1.78
CKS2P33552 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC3.95□□□□□ -1.78
CKS2P33552 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
CKS2P33552 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
CKS2P33552 AC104260.2-201ENST00000623551 3497 ntBASIC3.95□□□□□ -1.78
CKS2P33552 LINC01613-201ENST00000561476 2780 ntBASIC3.95□□□□□ -1.78
CKS2P33552 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC3.95□□□□□ -1.78
CKS2P33552 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC3.95□□□□□ -1.78
CKS2P33552 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
CKS2P33552 AC019072.1-201ENST00000604535 1551 ntBASIC3.95□□□□□ -1.78
CKS2P33552 AC011447.7-201ENST00000624228 1590 ntBASIC3.95□□□□□ -1.78
CKS2P33552 PDZK1P1-202ENST00000425209 1350 ntBASIC3.95□□□□□ -1.78
CKS2P33552 OR9G4-201ENST00000302957 984 ntBASIC3.95□□□□□ -1.78
CKS2P33552 RN7SKP153-201ENST00000365026 316 ntBASIC3.95□□□□□ -1.78
CKS2P33552 AC104463.1-201ENST00000411431 365 ntTSL 5 BASIC3.95□□□□□ -1.78
CKS2P33552 LINC00354-201ENST00000412119 347 ntTSL 5 BASIC3.95□□□□□ -1.78
CKS2P33552 OR6C64P-201ENST00000419708 825 ntBASIC3.95□□□□□ -1.78
CKS2P33552 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC3.95□□□□□ -1.78
CKS2P33552 LINC01114-201ENST00000421071 482 ntTSL 3 BASIC3.95□□□□□ -1.78
CKS2P33552 AC016745.1-201ENST00000422178 508 ntTSL 5 BASIC3.95□□□□□ -1.78
CKS2P33552 AC126120.1-201ENST00000431082 470 ntBASIC3.95□□□□□ -1.78
CKS2P33552 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC3.95□□□□□ -1.78
CKS2P33552 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC3.95□□□□□ -1.78
CKS2P33552 AL158214.1-201ENST00000444423 404 ntBASIC3.95□□□□□ -1.78
CKS2P33552 AC005077.1-201ENST00000449226 375 ntBASIC3.95□□□□□ -1.78
CKS2P33552 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC3.95□□□□□ -1.78
CKS2P33552 SEPT7P3-201ENST00000455017 621 ntBASIC3.95□□□□□ -1.78
CKS2P33552 RBMY2HP-201ENST00000457961 720 ntBASIC3.95□□□□□ -1.78
CKS2P33552 H3F3AP5-201ENST00000475267 429 ntBASIC3.95□□□□□ -1.78
CKS2P33552 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
CKS2P33552 IQCH-203ENST00000512104 1000 ntTSL 2 BASIC3.95□□□□□ -1.78
CKS2P33552 AC097537.1-201ENST00000514864 1213 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
CKS2P33552 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC3.95□□□□□ -1.78
CKS2P33552 SCARNA6.1-201ENST00000516989 238 ntBASIC3.95□□□□□ -1.78
CKS2P33552 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
CKS2P33552 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC3.95□□□□□ -1.78
CKS2P33552 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC3.95□□□□□ -1.78
CKS2P33552 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC3.95□□□□□ -1.78
CKS2P33552 AC022884.2-201ENST00000578535 580 ntBASIC3.95□□□□□ -1.78
CKS2P33552 MIR4776-2-201ENST00000580204 80 ntBASIC3.95□□□□□ -1.78
CKS2P33552 AP005119.1-201ENST00000580956 292 ntBASIC3.95□□□□□ -1.78
CKS2P33552 GMFG-202ENST00000594700 397 ntTSL 2 BASIC3.95□□□□□ -1.78
CKS2P33552 AL117336.3-201ENST00000603160 1107 ntTSL 3 BASIC3.95□□□□□ -1.78
CKS2P33552 AC244107.2-201ENST00000611773 76 ntBASIC3.95□□□□□ -1.78
CKS2P33552 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC3.95□□□□□ -1.78
CKS2P33552 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC3.95□□□□□ -1.78
CKS2P33552 AC089999.3-201ENST00000622440 577 ntBASIC3.95□□□□□ -1.78
CKS2P33552 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC3.95□□□□□ -1.78
CKS2P33552 AC099654.6-201ENST00000636487 512 ntBASIC3.95□□□□□ -1.78
CKS2P33552 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC3.95□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 67.9 ms