Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 RN7SL836P-201ENST00000476140 296 ntBASIC5.87□□□□□ -1.47
CD40P25942 GAPDHP36-201ENST00000480688 918 ntBASIC5.87□□□□□ -1.47
CD40P25942 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC5.87□□□□□ -1.47
CD40P25942 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC5.87□□□□□ -1.47
CD40P25942 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC5.87□□□□□ -1.47
CD40P25942 AC092349.1-201ENST00000504903 310 ntBASIC5.87□□□□□ -1.47
CD40P25942 AC008957.1-202ENST00000512329 681 ntTSL 3 BASIC5.87□□□□□ -1.47
CD40P25942 HMGB1P23-201ENST00000518743 568 ntBASIC5.87□□□□□ -1.47
CD40P25942 AP001831.1-201ENST00000524610 411 ntTSL 3 BASIC5.87□□□□□ -1.47
CD40P25942 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC5.87□□□□□ -1.47
CD40P25942 ST3GAL3-232ENST00000531451 420 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
CD40P25942 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
CD40P25942 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC5.87□□□□□ -1.47
CD40P25942 AC079075.2-201ENST00000557964 449 ntTSL 4 BASIC5.87□□□□□ -1.47
CD40P25942 MDFIC2-201ENST00000567252 778 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
CD40P25942 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC5.87□□□□□ -1.47
CD40P25942 AC012594.1-252ENST00000595011 876 ntTSL 5 BASIC5.87□□□□□ -1.47
CD40P25942 AC119751.7-201ENST00000600494 245 ntBASIC5.87□□□□□ -1.47
CD40P25942 AL353593.3-201ENST00000602778 764 ntTSL 2 BASIC5.87□□□□□ -1.47
CD40P25942 HNRNPA3P9-201ENST00000604913 979 ntBASIC5.87□□□□□ -1.47
CD40P25942 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC5.87□□□□□ -1.47
CD40P25942 AL451074.6-201ENST00000608512 729 ntBASIC5.87□□□□□ -1.47
CD40P25942 OR1N2-202ENST00000616791 993 ntAPPRIS P2 BASIC5.87□□□□□ -1.47
CD40P25942 AC091965.5-201ENST00000624785 342 ntBASIC5.87□□□□□ -1.47
CD40P25942 SNORA16A-202ENST00000628458 135 ntBASIC5.87□□□□□ -1.47
CD40P25942 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
CD40P25942 ZNF542P-204ENST00000482727 1305 ntBASIC5.87□□□□□ -1.47
CD40P25942 ZNF714-202ENST00000456283 6812 ntAPPRIS P1 TSL 2 BASIC5.87□□□□□ -1.47
CD40P25942 ZHX3-217ENST00000560361 4140 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
CD40P25942 CASP5-201ENST00000260315 1414 ntTSL 5 BASIC5.87□□□□□ -1.47
CD40P25942 FANCD2P2-201ENST00000437591 1400 ntBASIC5.87□□□□□ -1.47
CD40P25942 OR11G2-203ENST00000641879 4415 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
CD40P25942 AQP4-205ENST00000581374 1586 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
CD40P25942 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC5.87□□□□□ -1.47
CD40P25942 RAD54B-201ENST00000297592 1879 ntTSL 2 BASIC5.87□□□□□ -1.47
CD40P25942 GRPR-201ENST00000380289 1929 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
CD40P25942 CLEC3A-201ENST00000299642 1971 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
CD40P25942 MITF-206ENST00000394351 1956 ntAPPRIS P3 TSL 1 (best) BASIC5.87□□□□□ -1.47
CD40P25942 TMEM75-201ENST00000624314 2165 ntBASIC5.87□□□□□ -1.47
CD40P25942 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC5.87□□□□□ -1.47
CD40P25942 LINC02197-201ENST00000502659 2767 ntTSL 2 BASIC5.87□□□□□ -1.47
CD40P25942 MAML2-202ENST00000618849 3154 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
CD40P25942 TMEM72-AS1-201ENST00000450287 3300 ntTSL 2 BASIC5.87□□□□□ -1.47
CD40P25942 PRKAR1A-204ENST00000536854 3697 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
CD40P25942 AKR1C2-201ENST00000380753 3756 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
CD40P25942 QTRT2-212ENST00000485050 3844 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
CD40P25942 AC099062.1-202ENST00000640362 3864 ntTSL 5 BASIC5.87□□□□□ -1.47
CD40P25942 SLC14A1-201ENST00000321925 3971 ntAPPRIS P3 TSL 1 (best) BASIC5.87□□□□□ -1.47
CD40P25942 SENP8-201ENST00000340912 4281 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
CD40P25942 SPHKAP-201ENST00000344657 6804 ntAPPRIS P3 TSL 1 (best) BASIC5.86□□□□□ -1.47
CD40P25942 PCNX4-201ENST00000317623 17339 ntAPPRIS P3 TSL 5 BASIC5.86□□□□□ -1.47
CD40P25942 CORIN-201ENST00000273857 4852 ntAPPRIS P2 TSL 1 (best) BASIC5.86□□□□□ -1.47
CD40P25942 SETDB1-201ENST00000271640 4437 ntAPPRIS ALT1 TSL 1 (best) BASIC5.86□□□□□ -1.47
CD40P25942 OR2AG2-202ENST00000641124 4224 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
CD40P25942 OR2AG2-203ENST00000641169 4221 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
CD40P25942 ADH1B-201ENST00000305046 4072 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
CD40P25942 TLR10-204ENST00000506111 3462 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
CD40P25942 B3GNT2-202ENST00000405767 2436 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
CD40P25942 MEPE-204ENST00000497649 2226 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
CD40P25942 NAT1-206ENST00000518029 2162 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
CD40P25942 ZMYM2-210ENST00000610343 10200 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
CD40P25942 PPFIBP1-202ENST00000318304 6001 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
CD40P25942 C11orf54-202ENST00000354421 1733 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
CD40P25942 GABRA1-211ENST00000635880 1739 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
CD40P25942 AC007012.2-201ENST00000623206 1676 ntBASIC5.86□□□□□ -1.47
CD40P25942 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
CD40P25942 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
CD40P25942 AC019117.1-201ENST00000636929 1462 ntTSL 5 BASIC5.86□□□□□ -1.47
CD40P25942 SUN3-201ENST00000297325 1416 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
CD40P25942 FAM160A1-203ENST00000505231 4156 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
CD40P25942 OR56B2P-201ENST00000317102 954 ntBASIC5.86□□□□□ -1.47
CD40P25942 IGKV7-3-201ENST00000357453 298 ntBASIC5.86□□□□□ -1.47
CD40P25942 HHLA3-201ENST00000359875 898 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
CD40P25942 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC5.86□□□□□ -1.47
CD40P25942 MIR1204-201ENST00000408388 67 ntBASIC5.86□□□□□ -1.47
CD40P25942 AC114814.2-201ENST00000419195 485 ntBASIC5.86□□□□□ -1.47
CD40P25942 LINC01058-201ENST00000420694 448 ntTSL 5 BASIC5.86□□□□□ -1.47
CD40P25942 AC066692.1-201ENST00000421721 457 ntBASIC5.86□□□□□ -1.47
CD40P25942 AL022100.2-201ENST00000422548 389 ntTSL 3 BASIC5.86□□□□□ -1.47
CD40P25942 DUTP4-201ENST00000424782 475 ntBASIC5.86□□□□□ -1.47
CD40P25942 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC5.86□□□□□ -1.47
CD40P25942 AC022022.1-201ENST00000430304 178 ntBASIC5.86□□□□□ -1.47
CD40P25942 GAPDHP19-201ENST00000431768 1005 ntBASIC5.86□□□□□ -1.47
CD40P25942 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
CD40P25942 USP9YP28-201ENST00000435142 589 ntBASIC5.86□□□□□ -1.47
CD40P25942 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC5.86□□□□□ -1.47
CD40P25942 NFIA-AS2-203ENST00000438559 1275 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
CD40P25942 VN1R110P-201ENST00000438988 971 ntBASIC5.86□□□□□ -1.47
CD40P25942 AL033379.1-201ENST00000442184 481 ntTSL 3 BASIC5.86□□□□□ -1.47
CD40P25942 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC5.86□□□□□ -1.47
CD40P25942 LIX1L-AS1-206ENST00000447686 846 ntTSL 2 BASIC5.86□□□□□ -1.47
CD40P25942 RPS18P1-201ENST00000447840 458 ntBASIC5.86□□□□□ -1.47
CD40P25942 AL158835.1-204ENST00000449693 371 ntTSL 3 BASIC5.86□□□□□ -1.47
CD40P25942 AC007099.1-201ENST00000451622 1185 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
CD40P25942 AC097262.1-201ENST00000452559 548 ntBASIC5.86□□□□□ -1.47
CD40P25942 HNRNPDLP2-201ENST00000455248 751 ntBASIC5.86□□□□□ -1.47
CD40P25942 YRDCP3-201ENST00000456507 480 ntBASIC5.86□□□□□ -1.47
CD40P25942 AKR1D1P1-201ENST00000457236 936 ntBASIC5.86□□□□□ -1.47
CD40P25942 AC099328.2-201ENST00000465347 455 ntTSL 3 BASIC5.86□□□□□ -1.47
CD40P25942 GAPVD1-215ENST00000470056 8923 ntTSL 5 BASIC5.86□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 106.3 ms