Protein–RNA interactions for Protein: P14543

NID1, Nidogen-1, humanhuman

Predictions only

Length 1,247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NID1P14543 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC6.9□□□□□ -1.3
NID1P14543 AC104109.4-202ENST00000518409 1082 ntTSL 2 BASIC6.9□□□□□ -1.3
NID1P14543 KCTD9P6-201ENST00000522306 950 ntBASIC6.9□□□□□ -1.3
NID1P14543 OR5AN2P-201ENST00000534535 896 ntBASIC6.9□□□□□ -1.3
NID1P14543 PRR13-204ENST00000547368 688 ntAPPRIS ALT2 TSL 3 BASIC6.9□□□□□ -1.3
NID1P14543 OR4F28P-201ENST00000559128 938 ntBASIC6.9□□□□□ -1.3
NID1P14543 IGHV1OR15-3-201ENST00000564926 351 ntBASIC6.9□□□□□ -1.3
NID1P14543 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC6.9□□□□□ -1.3
NID1P14543 AC138811.1-201ENST00000569096 361 ntTSL 3 BASIC6.9□□□□□ -1.3
NID1P14543 RN7SL42P-201ENST00000579786 294 ntBASIC6.9□□□□□ -1.3
NID1P14543 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC6.9□□□□□ -1.3
NID1P14543 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC6.9□□□□□ -1.3
NID1P14543 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC6.9□□□□□ -1.3
NID1P14543 MCM3AP-AS1-207ENST00000588753 589 ntTSL 4 BASIC6.9□□□□□ -1.3
NID1P14543 OR4F8P-201ENST00000589943 937 ntBASIC6.9□□□□□ -1.3
NID1P14543 AC005884.2-201ENST00000593107 247 ntTSL 5 BASIC6.9□□□□□ -1.3
NID1P14543 OR7A8P-201ENST00000595427 913 ntBASIC6.9□□□□□ -1.3
NID1P14543 AL109936.2-201ENST00000605350 650 ntBASIC6.9□□□□□ -1.3
NID1P14543 AL391425.1-201ENST00000613658 807 ntTSL 5 BASIC6.9□□□□□ -1.3
NID1P14543 AC007792.1-201ENST00000623023 402 ntBASIC6.9□□□□□ -1.3
NID1P14543 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC6.9□□□□□ -1.3
NID1P14543 MIR3662-201ENST00000637030 95 ntBASIC6.9□□□□□ -1.3
NID1P14543 5_8S_rRNA.6-201ENST00000637374 152 ntBASIC6.9□□□□□ -1.3
NID1P14543 AL121936.2-201ENST00000641935 662 ntBASIC6.9□□□□□ -1.3
NID1P14543 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
NID1P14543 ELF5-201ENST00000257832 2321 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
NID1P14543 AC114786.1-201ENST00000512892 1415 ntBASIC6.9□□□□□ -1.31
NID1P14543 RARSP1-201ENST00000542842 1418 ntBASIC6.9□□□□□ -1.31
NID1P14543 AC109361.1-201ENST00000513220 3526 ntTSL 2 BASIC6.9□□□□□ -1.31
NID1P14543 MTCO1P11-201ENST00000429111 1528 ntBASIC6.9□□□□□ -1.31
NID1P14543 UNC5D-201ENST00000287272 8662 ntTSL 5 BASIC6.9□□□□□ -1.31
NID1P14543 UTY-216ENST00000624098 3636 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
NID1P14543 ATP2B4-204ENST00000367218 8918 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
NID1P14543 AL133464.1-201ENST00000635130 1705 ntTSL 5 BASIC6.9□□□□□ -1.31
NID1P14543 OR10K2-202ENST00000641042 3023 ntAPPRIS P1 BASIC6.9□□□□□ -1.31
NID1P14543 CD96-201ENST00000283285 4324 ntAPPRIS P4 TSL 1 (best) BASIC6.9□□□□□ -1.31
NID1P14543 DCP1A-201ENST00000294241 1853 ntTSL 2 BASIC6.9□□□□□ -1.31
NID1P14543 LINC01788-201ENST00000419450 2086 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
NID1P14543 SLC35A3-207ENST00000533028 14759 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
NID1P14543 PNN-201ENST00000216832 3576 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
NID1P14543 FCGR3B-208ENST00000613418 2251 ntTSL 5 BASIC6.89□□□□□ -1.31
NID1P14543 FLJ42393-201ENST00000623801 2270 ntBASIC6.89□□□□□ -1.31
NID1P14543 SP110-203ENST00000358662 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC6.89□□□□□ -1.31
NID1P14543 ZNFX1-202ENST00000371752 7212 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
NID1P14543 AL512624.2-201ENST00000621705 2566 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
NID1P14543 IARS-205ENST00000443024 4341 ntTSL 5 BASIC6.89□□□□□ -1.31
NID1P14543 CCR9-201ENST00000355983 2653 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
NID1P14543 KIAA0040-202ENST00000444639 4494 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
NID1P14543 POU2F3-201ENST00000260264 2903 ntTSL 2 BASIC6.89□□□□□ -1.31
NID1P14543 ZNF426-201ENST00000253115 7085 ntAPPRIS P3 TSL 1 (best) BASIC6.89□□□□□ -1.31
NID1P14543 NBPF19-206ENST00000621744 14425 ntTSL 5 BASIC6.89□□□□□ -1.31
NID1P14543 UBN1-208ENST00000590769 3530 ntTSL 2 BASIC6.89□□□□□ -1.31
NID1P14543 MT4-201ENST00000219162 294 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
NID1P14543 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
NID1P14543 PPIAP22-201ENST00000358455 498 ntBASIC6.89□□□□□ -1.31
NID1P14543 RNU6-839P-201ENST00000363347 108 ntBASIC6.89□□□□□ -1.31
NID1P14543 Y_RNA.216-201ENST00000364205 93 ntBASIC6.89□□□□□ -1.31
NID1P14543 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC6.89□□□□□ -1.31
NID1P14543 OR7E101P-201ENST00000400428 513 ntBASIC6.89□□□□□ -1.31
NID1P14543 RPL10P10-201ENST00000403509 664 ntBASIC6.89□□□□□ -1.31
NID1P14543 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC6.89□□□□□ -1.31
NID1P14543 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC6.89□□□□□ -1.31
NID1P14543 USP9YP13-201ENST00000417797 480 ntBASIC6.89□□□□□ -1.31
NID1P14543 AC127537.1-201ENST00000418183 748 ntBASIC6.89□□□□□ -1.31
NID1P14543 AL049712.1-201ENST00000418739 872 ntTSL 3 BASIC6.89□□□□□ -1.31
NID1P14543 AC023141.1-201ENST00000419418 379 ntBASIC6.89□□□□□ -1.31
NID1P14543 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC6.89□□□□□ -1.31
NID1P14543 AL356309.1-201ENST00000425153 339 ntTSL 3 BASIC6.89□□□□□ -1.31
NID1P14543 LINC00352-201ENST00000425800 552 ntTSL 3 BASIC6.89□□□□□ -1.31
NID1P14543 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC6.89□□□□□ -1.31
NID1P14543 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC6.89□□□□□ -1.31
NID1P14543 SS18L2P1-201ENST00000445923 213 ntBASIC6.89□□□□□ -1.31
NID1P14543 RPS29P5-201ENST00000452777 171 ntBASIC6.89□□□□□ -1.31
NID1P14543 AL033528.1-201ENST00000453780 140 ntBASIC6.89□□□□□ -1.31
NID1P14543 RPL7AP52-201ENST00000458096 790 ntBASIC6.89□□□□□ -1.31
NID1P14543 RN7SL213P-201ENST00000463482 317 ntBASIC6.89□□□□□ -1.31
NID1P14543 RPSAP39-201ENST00000467439 883 ntBASIC6.89□□□□□ -1.31
NID1P14543 AP000797.1-201ENST00000478870 387 ntBASIC6.89□□□□□ -1.31
NID1P14543 AC022447.3-201ENST00000506865 495 ntBASIC6.89□□□□□ -1.31
NID1P14543 AC027541.1-201ENST00000519306 485 ntTSL 3 BASIC6.89□□□□□ -1.31
NID1P14543 AP000880.1-202ENST00000526487 588 ntTSL 3 BASIC6.89□□□□□ -1.31
NID1P14543 AC090458.1-202ENST00000530387 462 ntTSL 5 BASIC6.89□□□□□ -1.31
NID1P14543 AC009869.1-201ENST00000530418 528 ntTSL 4 BASIC6.89□□□□□ -1.31
NID1P14543 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC6.89□□□□□ -1.31
NID1P14543 HPRT1P3-201ENST00000539521 576 ntBASIC6.89□□□□□ -1.31
NID1P14543 EGLN3P1-201ENST00000541727 720 ntBASIC6.89□□□□□ -1.31
NID1P14543 AC005833.3-202ENST00000544741 770 ntAPPRIS P1 TSL 3 BASIC6.89□□□□□ -1.31
NID1P14543 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
NID1P14543 TMEM116-208ENST00000549537 1229 ntAPPRIS ALT2 TSL 2 BASIC6.89□□□□□ -1.31
NID1P14543 PSMB7P1-201ENST00000556349 514 ntBASIC6.89□□□□□ -1.31
NID1P14543 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC6.89□□□□□ -1.31
NID1P14543 EIF4EBP2P2-201ENST00000563883 333 ntBASIC6.89□□□□□ -1.31
NID1P14543 AC130456.5-201ENST00000569345 510 ntTSL 5 BASIC6.89□□□□□ -1.31
NID1P14543 RN7SL178P-201ENST00000582930 304 ntBASIC6.89□□□□□ -1.31
NID1P14543 SLFN5-203ENST00000592325 1225 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
NID1P14543 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC6.89□□□□□ -1.31
NID1P14543 LINC01435-212ENST00000601212 742 ntTSL 5 BASIC6.89□□□□□ -1.31
NID1P14543 BMS1P7-201ENST00000602440 1052 ntBASIC6.89□□□□□ -1.31
NID1P14543 PRR13P3-201ENST00000603578 376 ntBASIC6.89□□□□□ -1.31
NID1P14543 AL161729.4-201ENST00000604650 476 ntBASIC6.89□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 138 ms