Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 MTND2P14-201ENST00000482139 351 ntBASIC8.73□□□□□ -1.01
CSB-PGBD3P0DP91 RPL12P30-201ENST00000488389 499 ntBASIC8.73□□□□□ -1.01
CSB-PGBD3P0DP91 RPL5P14-201ENST00000494197 878 ntBASIC8.73□□□□□ -1.01
CSB-PGBD3P0DP91 LINC01386-201ENST00000506196 440 ntTSL 3 BASIC8.73□□□□□ -1.01
CSB-PGBD3P0DP91 AC020980.1-201ENST00000513041 458 ntTSL 5 BASIC8.73□□□□□ -1.01
CSB-PGBD3P0DP91 RNA5SP206-201ENST00000516703 121 ntBASIC8.73□□□□□ -1.01
CSB-PGBD3P0DP91 NDUFS5P6-201ENST00000529136 295 ntBASIC8.73□□□□□ -1.01
CSB-PGBD3P0DP91 AL049629.1-201ENST00000534431 648 ntTSL 3 BASIC8.73□□□□□ -1.01
CSB-PGBD3P0DP91 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC8.73□□□□□ -1.01
CSB-PGBD3P0DP91 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC8.73□□□□□ -1.01
CSB-PGBD3P0DP91 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC8.73□□□□□ -1.01
CSB-PGBD3P0DP91 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC8.73□□□□□ -1.01
CSB-PGBD3P0DP91 LINC01533-204ENST00000590719 435 ntTSL 5 BASIC8.73□□□□□ -1.01
CSB-PGBD3P0DP91 AP000811.1-201ENST00000603803 651 ntBASIC8.73□□□□□ -1.01
CSB-PGBD3P0DP91 AL035411.2-201ENST00000604022 421 ntBASIC8.73□□□□□ -1.01
CSB-PGBD3P0DP91 AC099842.1-201ENST00000619919 596 ntBASIC8.73□□□□□ -1.01
CSB-PGBD3P0DP91 Z69908.1-201ENST00000622603 247 ntBASIC8.73□□□□□ -1.01
CSB-PGBD3P0DP91 AC091965.5-201ENST00000624785 342 ntBASIC8.73□□□□□ -1.01
CSB-PGBD3P0DP91 PFKM-232ENST00000629846 381 ntTSL 4 BASIC8.73□□□□□ -1.01
CSB-PGBD3P0DP91 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC8.73□□□□□ -1.01
CSB-PGBD3P0DP91 MIR4302-201ENST00000638058 60 ntBASIC8.73□□□□□ -1.01
CSB-PGBD3P0DP91 BCL2L14-211ENST00000586576 1927 ntTSL 5 BASIC8.73□□□□□ -1.01
CSB-PGBD3P0DP91 MDM4-207ENST00000454264 9926 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
CSB-PGBD3P0DP91 ELMO2-203ENST00000372176 3678 ntTSL 5 BASIC8.73□□□□□ -1.01
CSB-PGBD3P0DP91 BMPR2-202ENST00000374580 11461 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
CSB-PGBD3P0DP91 SLC9B1P1-201ENST00000331172 1337 ntBASIC8.73□□□□□ -1.01
CSB-PGBD3P0DP91 OR2T2-203ENST00000642130 3331 ntAPPRIS P1 BASIC8.73□□□□□ -1.01
CSB-PGBD3P0DP91 ARMC3-203ENST00000409049 2479 ntAPPRIS ALT2 TSL 1 (best) BASIC8.73□□□□□ -1.01
CSB-PGBD3P0DP91 NBPF26-206ENST00000617913 2931 ntTSL 5 BASIC8.73□□□□□ -1.01
CSB-PGBD3P0DP91 FBXW10-203ENST00000395665 3431 ntAPPRIS P3 TSL 1 (best) BASIC8.73□□□□□ -1.01
CSB-PGBD3P0DP91 RPGRIP1L-202ENST00000379925 5297 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
CSB-PGBD3P0DP91 CD46-203ENST00000354848 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC8.73□□□□□ -1.01
CSB-PGBD3P0DP91 CCR2-204ENST00000445132 2386 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
CSB-PGBD3P0DP91 SELP-203ENST00000367788 2427 ntAPPRIS ALT2 TSL 5 BASIC8.72□□□□□ -1.01
CSB-PGBD3P0DP91 DICER1-201ENST00000343455 10277 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
CSB-PGBD3P0DP91 SORCS1-209ENST00000612154 6862 ntTSL 5 BASIC8.72□□□□□ -1.01
CSB-PGBD3P0DP91 KIDINS220-201ENST00000256707 7361 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
CSB-PGBD3P0DP91 MITF-201ENST00000314557 1798 ntAPPRIS ALT1 TSL 1 (best) BASIC8.72□□□□□ -1.01
CSB-PGBD3P0DP91 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
CSB-PGBD3P0DP91 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
CSB-PGBD3P0DP91 AL157702.1-201ENST00000398764 426 ntBASIC8.72□□□□□ -1.01
CSB-PGBD3P0DP91 TANK-203ENST00000402568 878 ntTSL 5 BASIC8.72□□□□□ -1.01
CSB-PGBD3P0DP91 PRELID1P2-201ENST00000407805 396 ntBASIC8.72□□□□□ -1.01
CSB-PGBD3P0DP91 HMGN1P20-201ENST00000411849 300 ntBASIC8.72□□□□□ -1.01
CSB-PGBD3P0DP91 AL008987.1-201ENST00000415528 237 ntBASIC8.72□□□□□ -1.01
CSB-PGBD3P0DP91 PTP4A1P5-201ENST00000420305 455 ntBASIC8.72□□□□□ -1.01
CSB-PGBD3P0DP91 MTND4P28-201ENST00000426217 387 ntBASIC8.72□□□□□ -1.01
CSB-PGBD3P0DP91 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC8.72□□□□□ -1.01
CSB-PGBD3P0DP91 AC005189.1-201ENST00000431286 310 ntBASIC8.72□□□□□ -1.01
CSB-PGBD3P0DP91 CRYGGP-201ENST00000443337 145 ntBASIC8.72□□□□□ -1.01
CSB-PGBD3P0DP91 CATSPER2P1-205ENST00000446479 419 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
CSB-PGBD3P0DP91 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
CSB-PGBD3P0DP91 RBMY3AP-201ENST00000449381 1145 ntBASIC8.72□□□□□ -1.01
CSB-PGBD3P0DP91 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC8.72□□□□□ -1.01
CSB-PGBD3P0DP91 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC8.72□□□□□ -1.01
CSB-PGBD3P0DP91 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC8.72□□□□□ -1.01
CSB-PGBD3P0DP91 AC091951.3-201ENST00000504093 246 ntBASIC8.72□□□□□ -1.01
CSB-PGBD3P0DP91 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC8.72□□□□□ -1.01
CSB-PGBD3P0DP91 RN7SKP141-201ENST00000516167 338 ntBASIC8.72□□□□□ -1.01
CSB-PGBD3P0DP91 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC8.72□□□□□ -1.01
CSB-PGBD3P0DP91 OR8I1P-201ENST00000529291 931 ntBASIC8.72□□□□□ -1.01
CSB-PGBD3P0DP91 AC063926.1-201ENST00000539532 415 ntTSL 2 BASIC8.72□□□□□ -1.01
CSB-PGBD3P0DP91 NANOGNBP2-201ENST00000544753 553 ntBASIC8.72□□□□□ -1.01
CSB-PGBD3P0DP91 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
CSB-PGBD3P0DP91 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC8.72□□□□□ -1.01
CSB-PGBD3P0DP91 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC8.72□□□□□ -1.01
CSB-PGBD3P0DP91 RN7SL404P-201ENST00000582421 281 ntBASIC8.72□□□□□ -1.01
CSB-PGBD3P0DP91 AC107982.3-201ENST00000584957 985 ntBASIC8.72□□□□□ -1.01
CSB-PGBD3P0DP91 AC007786.1-202ENST00000590607 443 ntTSL 3 BASIC8.72□□□□□ -1.01
CSB-PGBD3P0DP91 LARP7P1-201ENST00000605576 316 ntBASIC8.72□□□□□ -1.01
CSB-PGBD3P0DP91 AL359740.1-201ENST00000624340 592 ntBASIC8.72□□□□□ -1.01
CSB-PGBD3P0DP91 AC007494.3-201ENST00000624660 743 ntBASIC8.72□□□□□ -1.01
CSB-PGBD3P0DP91 AL008636.1-201ENST00000625038 1018 ntBASIC8.72□□□□□ -1.01
CSB-PGBD3P0DP91 UGP2-231ENST00000627474 264 ntTSL 5 BASIC8.72□□□□□ -1.01
CSB-PGBD3P0DP91 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC8.72□□□□□ -1.01
CSB-PGBD3P0DP91 SETDB1-205ENST00000368969 4370 ntAPPRIS P3 TSL 1 (best) BASIC8.72□□□□□ -1.01
CSB-PGBD3P0DP91 NAP1L1-227ENST00000618691 13505 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
CSB-PGBD3P0DP91 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
CSB-PGBD3P0DP91 AC087430.1-201ENST00000451707 3699 ntTSL 2 BASIC8.72□□□□□ -1.01
CSB-PGBD3P0DP91 HMBOX1-206ENST00000519047 1551 ntTSL 5 BASIC8.72□□□□□ -1.01
CSB-PGBD3P0DP91 CASC19-281ENST00000642118 1554 ntBASIC8.72□□□□□ -1.01
CSB-PGBD3P0DP91 CPSF6-202ENST00000435070 6616 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
CSB-PGBD3P0DP91 WDR48-201ENST00000302313 3707 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
CSB-PGBD3P0DP91 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC8.72□□□□□ -1.01
CSB-PGBD3P0DP91 CNTN4-AS1-201ENST00000442749 1640 ntTSL 3 BASIC8.72□□□□□ -1.01
CSB-PGBD3P0DP91 DIAPH3-206ENST00000465066 2735 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
CSB-PGBD3P0DP91 SCP2-212ENST00000488965 3926 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
CSB-PGBD3P0DP91 IL5RA-209ENST00000446632 2514 ntAPPRIS P4 TSL 5 BASIC8.72□□□□□ -1.01
CSB-PGBD3P0DP91 MTPAP-201ENST00000263063 5601 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
CSB-PGBD3P0DP91 DDX18-201ENST00000263239 3796 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
CSB-PGBD3P0DP91 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC8.71□□□□□ -1.01
CSB-PGBD3P0DP91 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
CSB-PGBD3P0DP91 VRK2-203ENST00000417641 2381 ntAPPRIS ALT2 TSL 2 BASIC8.71□□□□□ -1.01
CSB-PGBD3P0DP91 GCNT3-209ENST00000560585 2360 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
CSB-PGBD3P0DP91 PIK3C3-202ENST00000398870 9206 ntTSL 2 BASIC8.71□□□□□ -1.01
CSB-PGBD3P0DP91 NAALAD2-201ENST00000321955 3035 ntTSL 2 BASIC8.71□□□□□ -1.01
CSB-PGBD3P0DP91 ZNF585B-203ENST00000527838 2732 ntTSL 1 (best) BASIC8.71□□□□□ -1.01
CSB-PGBD3P0DP91 KARSP3-201ENST00000571212 1504 ntBASIC8.71□□□□□ -1.01
CSB-PGBD3P0DP91 BMX-201ENST00000342014 2499 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
CSB-PGBD3P0DP91 ADGRA3-209ENST00000508133 1572 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
Retrieved 100 of 98,524 protein–RNA pairs in 75.2 ms