Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 GCNT6-201ENST00000379591 934 ntBASIC6.78□□□□□ -1.32
HLA-DOAP06340 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
HLA-DOAP06340 GAPDHP42-201ENST00000406848 981 ntBASIC6.78□□□□□ -1.32
HLA-DOAP06340 NPM1P4-201ENST00000414095 812 ntBASIC6.78□□□□□ -1.32
HLA-DOAP06340 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC6.78□□□□□ -1.32
HLA-DOAP06340 AL133173.1-201ENST00000423458 397 ntBASIC6.78□□□□□ -1.32
HLA-DOAP06340 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC6.78□□□□□ -1.32
HLA-DOAP06340 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC6.78□□□□□ -1.32
HLA-DOAP06340 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC6.78□□□□□ -1.32
HLA-DOAP06340 LINC01911-201ENST00000450667 806 ntTSL 5 BASIC6.78□□□□□ -1.32
HLA-DOAP06340 AC098826.2-201ENST00000452011 651 ntBASIC6.78□□□□□ -1.32
HLA-DOAP06340 AP002371.1-201ENST00000463604 433 ntBASIC6.78□□□□□ -1.32
HLA-DOAP06340 RPS23P2-201ENST00000463671 415 ntBASIC6.78□□□□□ -1.32
HLA-DOAP06340 AL133445.1-201ENST00000467051 452 ntBASIC6.78□□□□□ -1.32
HLA-DOAP06340 AC093827.1-201ENST00000480094 861 ntBASIC6.78□□□□□ -1.32
HLA-DOAP06340 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC6.78□□□□□ -1.32
HLA-DOAP06340 FTH1P8-201ENST00000498161 514 ntBASIC6.78□□□□□ -1.32
HLA-DOAP06340 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC6.78□□□□□ -1.32
HLA-DOAP06340 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC6.78□□□□□ -1.32
HLA-DOAP06340 SPINK13-202ENST00000511106 661 ntAPPRIS ALT2 TSL 1 (best) BASIC6.78□□□□□ -1.32
HLA-DOAP06340 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC6.78□□□□□ -1.32
HLA-DOAP06340 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC6.78□□□□□ -1.32
HLA-DOAP06340 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC6.78□□□□□ -1.32
HLA-DOAP06340 DEFB109F-202ENST00000542600 509 ntTSL 2 BASIC6.78□□□□□ -1.32
HLA-DOAP06340 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC6.78□□□□□ -1.32
HLA-DOAP06340 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC6.78□□□□□ -1.32
HLA-DOAP06340 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC6.78□□□□□ -1.32
HLA-DOAP06340 AC006116.5-201ENST00000591936 559 ntBASIC6.78□□□□□ -1.32
HLA-DOAP06340 AC117490.2-201ENST00000610042 594 ntBASIC6.78□□□□□ -1.32
HLA-DOAP06340 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC6.78□□□□□ -1.32
HLA-DOAP06340 LINC01776-201ENST00000418344 2229 ntTSL 2 BASIC6.78□□□□□ -1.32
HLA-DOAP06340 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
HLA-DOAP06340 CASC19-248ENST00000641674 1356 ntBASIC6.78□□□□□ -1.32
HLA-DOAP06340 KLHL5-203ENST00000381930 3288 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
HLA-DOAP06340 Z83820.1-201ENST00000456978 1499 ntBASIC6.78□□□□□ -1.32
HLA-DOAP06340 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
HLA-DOAP06340 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
HLA-DOAP06340 ZNF528-203ENST00000391788 4209 ntTSL 2 BASIC6.77□□□□□ -1.32
HLA-DOAP06340 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC6.77□□□□□ -1.32
HLA-DOAP06340 PLCZ1-201ENST00000266505 2148 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
HLA-DOAP06340 OR2AG1-202ENST00000641258 6993 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
HLA-DOAP06340 OOSP2-201ENST00000278855 1633 ntAPPRIS P2 TSL 1 (best) BASIC6.77□□□□□ -1.33
HLA-DOAP06340 VNN3-203ENST00000392393 1603 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
HLA-DOAP06340 CD86-204ENST00000469710 1604 ntTSL 2 BASIC6.77□□□□□ -1.33
HLA-DOAP06340 CLEC2B-201ENST00000228438 1700 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
HLA-DOAP06340 RN7SKP162-201ENST00000363605 345 ntBASIC6.77□□□□□ -1.33
HLA-DOAP06340 RNA5SP30-201ENST00000365552 115 ntBASIC6.77□□□□□ -1.33
HLA-DOAP06340 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC6.77□□□□□ -1.33
HLA-DOAP06340 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC6.77□□□□□ -1.33
HLA-DOAP06340 RNU6-564P-201ENST00000410983 104 ntBASIC6.77□□□□□ -1.33
HLA-DOAP06340 VN1R37P-201ENST00000419096 748 ntBASIC6.77□□□□□ -1.33
HLA-DOAP06340 EIF4A1P7-201ENST00000421800 1220 ntBASIC6.77□□□□□ -1.33
HLA-DOAP06340 BX510359.3-201ENST00000422168 306 ntBASIC6.77□□□□□ -1.33
HLA-DOAP06340 AC007064.3-201ENST00000422608 359 ntBASIC6.77□□□□□ -1.33
HLA-DOAP06340 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC6.77□□□□□ -1.33
HLA-DOAP06340 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC6.77□□□□□ -1.33
HLA-DOAP06340 MTCO2P1-201ENST00000424648 477 ntBASIC6.77□□□□□ -1.33
HLA-DOAP06340 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC6.77□□□□□ -1.33
HLA-DOAP06340 AL365220.1-201ENST00000432923 399 ntBASIC6.77□□□□□ -1.33
HLA-DOAP06340 AC012075.1-201ENST00000436549 580 ntBASIC6.77□□□□□ -1.33
HLA-DOAP06340 AL390119.1-201ENST00000440329 312 ntBASIC6.77□□□□□ -1.33
HLA-DOAP06340 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC6.77□□□□□ -1.33
HLA-DOAP06340 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC6.77□□□□□ -1.33
HLA-DOAP06340 AF015262.1-201ENST00000455028 698 ntTSL 3 BASIC6.77□□□□□ -1.33
HLA-DOAP06340 SH3GLB1-202ENST00000482504 1199 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
HLA-DOAP06340 RN7SL184P-201ENST00000488308 297 ntBASIC6.77□□□□□ -1.33
HLA-DOAP06340 TRBV5-2-201ENST00000489095 273 ntBASIC6.77□□□□□ -1.33
HLA-DOAP06340 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC6.77□□□□□ -1.33
HLA-DOAP06340 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC6.77□□□□□ -1.33
HLA-DOAP06340 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC6.77□□□□□ -1.33
HLA-DOAP06340 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC6.77□□□□□ -1.33
HLA-DOAP06340 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC6.77□□□□□ -1.33
HLA-DOAP06340 IGKV2-19-201ENST00000518132 283 ntBASIC6.77□□□□□ -1.33
HLA-DOAP06340 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC6.77□□□□□ -1.33
HLA-DOAP06340 AC114550.3-201ENST00000524073 579 ntTSL 4 BASIC6.77□□□□□ -1.33
HLA-DOAP06340 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC6.77□□□□□ -1.33
HLA-DOAP06340 AL121594.2-201ENST00000541658 472 ntBASIC6.77□□□□□ -1.33
HLA-DOAP06340 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC6.77□□□□□ -1.33
HLA-DOAP06340 AC126615.2-201ENST00000553003 515 ntBASIC6.77□□□□□ -1.33
HLA-DOAP06340 SMARCE1P3-201ENST00000553649 1231 ntBASIC6.77□□□□□ -1.33
HLA-DOAP06340 AC106785.3-201ENST00000564064 847 ntBASIC6.77□□□□□ -1.33
HLA-DOAP06340 AC015720.2-201ENST00000567709 334 ntBASIC6.77□□□□□ -1.33
HLA-DOAP06340 C18orf32-202ENST00000582392 714 ntAPPRIS P1 TSL 3 BASIC6.77□□□□□ -1.33
HLA-DOAP06340 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC6.77□□□□□ -1.33
HLA-DOAP06340 ZNF92P2-201ENST00000600543 1059 ntBASIC6.77□□□□□ -1.33
HLA-DOAP06340 AC040174.2-201ENST00000602701 465 ntBASIC6.77□□□□□ -1.33
HLA-DOAP06340 ABI1P1-201ENST00000603375 1120 ntBASIC6.77□□□□□ -1.33
HLA-DOAP06340 SUMO2P15-201ENST00000604285 278 ntBASIC6.77□□□□□ -1.33
HLA-DOAP06340 AL035661.1-201ENST00000620459 1144 ntBASIC6.77□□□□□ -1.33
HLA-DOAP06340 MVP-219ENST00000629059 120 ntTSL 5 BASIC6.77□□□□□ -1.33
HLA-DOAP06340 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC6.77□□□□□ -1.33
HLA-DOAP06340 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC6.77□□□□□ -1.33
HLA-DOAP06340 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC6.77□□□□□ -1.33
HLA-DOAP06340 CYP2C8-201ENST00000371270 1923 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
HLA-DOAP06340 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC6.77□□□□□ -1.33
HLA-DOAP06340 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
HLA-DOAP06340 FSHR-202ENST00000406846 2784 ntAPPRIS P4 TSL 1 (best) BASIC6.77□□□□□ -1.33
HLA-DOAP06340 CPS1-IT1-201ENST00000628368 2306 ntBASIC6.77□□□□□ -1.33
HLA-DOAP06340 SBNO1-202ENST00000420886 10981 ntAPPRIS ALT1 TSL 1 (best) BASIC6.77□□□□□ -1.33
HLA-DOAP06340 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 107.3 ms