Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
COL5A2P05997 AC092747.4-201ENST00000620519 1861 ntBASIC7.11□□□□□ -1.27
COL5A2P05997 AC006600.2-201ENST00000624834 2506 ntBASIC7.11□□□□□ -1.27
COL5A2P05997 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
COL5A2P05997 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
COL5A2P05997 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC7.11□□□□□ -1.27
COL5A2P05997 U3.3-201ENST00000362986 216 ntBASIC7.11□□□□□ -1.27
COL5A2P05997 RNU1-136P-201ENST00000384181 164 ntBASIC7.11□□□□□ -1.27
COL5A2P05997 ATXN3-206ENST00000502250 1259 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
COL5A2P05997 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC7.11□□□□□ -1.27
COL5A2P05997 AC109464.1-201ENST00000511091 819 ntBASIC7.11□□□□□ -1.27
COL5A2P05997 RAB9BP1-201ENST00000519581 626 ntBASIC7.11□□□□□ -1.27
COL5A2P05997 AC021006.3-201ENST00000530771 192 ntBASIC7.11□□□□□ -1.27
COL5A2P05997 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC7.11□□□□□ -1.27
COL5A2P05997 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC7.11□□□□□ -1.27
COL5A2P05997 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC7.11□□□□□ -1.27
COL5A2P05997 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC7.11□□□□□ -1.27
COL5A2P05997 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC7.11□□□□□ -1.27
COL5A2P05997 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC7.11□□□□□ -1.27
COL5A2P05997 MIR4737-201ENST00000583979 81 ntBASIC7.11□□□□□ -1.27
COL5A2P05997 AC009597.2-201ENST00000604659 592 ntBASIC7.11□□□□□ -1.27
COL5A2P05997 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC7.11□□□□□ -1.27
COL5A2P05997 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC7.1□□□□□ -1.27
COL5A2P05997 TXNRD1-205ENST00000503506 3930 ntAPPRIS P2 TSL 1 (best) BASIC7.1□□□□□ -1.27
COL5A2P05997 ZRANB3-211ENST00000619650 2494 ntTSL 5 BASIC7.1□□□□□ -1.27
COL5A2P05997 OR9K1P-202ENST00000641111 3217 ntBASIC7.1□□□□□ -1.27
COL5A2P05997 PIGN-220ENST00000638167 4195 ntTSL 5 BASIC7.1□□□□□ -1.27
COL5A2P05997 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC7.1□□□□□ -1.27
COL5A2P05997 ETFBKMT-201ENST00000357721 6128 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
COL5A2P05997 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
COL5A2P05997 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
COL5A2P05997 IRF5P1-201ENST00000504852 2164 ntBASIC7.1□□□□□ -1.27
COL5A2P05997 RNU1-32P-201ENST00000363937 159 ntBASIC7.1□□□□□ -1.27
COL5A2P05997 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
COL5A2P05997 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC7.1□□□□□ -1.27
COL5A2P05997 RN7SL423P-201ENST00000486202 304 ntBASIC7.1□□□□□ -1.27
COL5A2P05997 OR7H2P-201ENST00000513483 306 ntBASIC7.1□□□□□ -1.27
COL5A2P05997 AC013644.1-201ENST00000523724 555 ntTSL 4 BASIC7.1□□□□□ -1.27
COL5A2P05997 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC7.1□□□□□ -1.27
COL5A2P05997 AL031320.1-201ENST00000604177 357 ntBASIC7.1□□□□□ -1.27
COL5A2P05997 AL133481.2-203ENST00000607558 139 ntBASIC7.1□□□□□ -1.27
COL5A2P05997 AC073575.2-201ENST00000614212 627 ntBASIC7.1□□□□□ -1.27
COL5A2P05997 AC073869.10-201ENST00000642016 354 ntBASIC7.1□□□□□ -1.27
COL5A2P05997 PLCH1-AS1-201ENST00000475196 1308 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
COL5A2P05997 CR1-204ENST00000367052 7469 ntTSL 5 BASIC7.09□□□□□ -1.27
COL5A2P05997 CR1-205ENST00000367053 7469 ntTSL 5 BASIC7.09□□□□□ -1.27
COL5A2P05997 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC7.09□□□□□ -1.27
COL5A2P05997 STAG1-201ENST00000236698 5951 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
COL5A2P05997 ATM-201ENST00000278616 13147 ntAPPRIS P1 TSL 5 BASIC7.09□□□□□ -1.27
COL5A2P05997 SLC35A3-207ENST00000533028 14759 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
COL5A2P05997 DNAJC15-201ENST00000379221 7853 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
COL5A2P05997 PGM3-215ENST00000616566 5905 ntTSL 2 BASIC7.09□□□□□ -1.27
COL5A2P05997 SGMS2-203ENST00000394686 2127 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
COL5A2P05997 PPP4R1L-209ENST00000497138 4680 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
COL5A2P05997 KIAA1210-201ENST00000402510 7824 ntAPPRIS P1 TSL 5 BASIC7.09□□□□□ -1.27
COL5A2P05997 C1orf162-201ENST00000343534 1107 ntAPPRIS P3 TSL 1 (best) BASIC7.09□□□□□ -1.27
COL5A2P05997 SVBP-202ENST00000372522 650 ntAPPRIS P1 TSL 3 BASIC7.09□□□□□ -1.27
COL5A2P05997 RNU6-398P-201ENST00000384143 109 ntBASIC7.09□□□□□ -1.27
COL5A2P05997 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
COL5A2P05997 USP24P1-201ENST00000433802 779 ntBASIC7.09□□□□□ -1.27
COL5A2P05997 NDUFA5P8-201ENST00000449019 346 ntBASIC7.09□□□□□ -1.27
COL5A2P05997 AL513533.1-201ENST00000453728 415 ntBASIC7.09□□□□□ -1.27
COL5A2P05997 AC058823.1-201ENST00000485315 474 ntBASIC7.09□□□□□ -1.27
COL5A2P05997 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC7.09□□□□□ -1.27
COL5A2P05997 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC7.09□□□□□ -1.27
COL5A2P05997 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC7.09□□□□□ -1.27
COL5A2P05997 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC7.09□□□□□ -1.27
COL5A2P05997 snoU109.5-201ENST00000516231 132 ntBASIC7.09□□□□□ -1.27
COL5A2P05997 C1GALT1P3-201ENST00000522049 819 ntBASIC7.09□□□□□ -1.27
COL5A2P05997 EDDM3DP-201ENST00000554692 434 ntBASIC7.09□□□□□ -1.27
COL5A2P05997 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC7.09□□□□□ -1.27
COL5A2P05997 EIF3FP1-201ENST00000613970 806 ntBASIC7.09□□□□□ -1.27
COL5A2P05997 FCGR3B-208ENST00000613418 2251 ntTSL 5 BASIC7.09□□□□□ -1.27
COL5A2P05997 TYW3-201ENST00000370867 3430 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.28
COL5A2P05997 PCNX1-201ENST00000304743 12919 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.28
COL5A2P05997 LCP2-201ENST00000046794 4678 ntAPPRIS P2 TSL 1 (best) BASIC7.08□□□□□ -1.28
COL5A2P05997 OR52N1-202ENST00000641645 2545 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
COL5A2P05997 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
COL5A2P05997 AC018809.2-201ENST00000602436 3823 ntBASIC7.08□□□□□ -1.28
COL5A2P05997 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC7.08□□□□□ -1.28
COL5A2P05997 RNA5SP505-201ENST00000364748 108 ntBASIC7.08□□□□□ -1.28
COL5A2P05997 AC008171.1-201ENST00000395058 200 ntBASIC7.08□□□□□ -1.28
COL5A2P05997 NUDT19P3-201ENST00000404698 555 ntBASIC7.08□□□□□ -1.28
COL5A2P05997 RPS4XP9-201ENST00000405151 780 ntBASIC7.08□□□□□ -1.28
COL5A2P05997 AL133482.1-201ENST00000415988 498 ntBASIC7.08□□□□□ -1.28
COL5A2P05997 AL139231.1-201ENST00000431001 312 ntTSL 3 BASIC7.08□□□□□ -1.28
COL5A2P05997 ZDHHC20P1-204ENST00000435787 423 ntBASIC7.08□□□□□ -1.28
COL5A2P05997 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC7.08□□□□□ -1.28
COL5A2P05997 LINC01781-202ENST00000443104 591 ntTSL 2 BASIC7.08□□□□□ -1.28
COL5A2P05997 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC7.08□□□□□ -1.28
COL5A2P05997 AC092905.1-201ENST00000467527 949 ntBASIC7.08□□□□□ -1.28
COL5A2P05997 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC7.08□□□□□ -1.28
COL5A2P05997 AP000797.2-201ENST00000475768 606 ntBASIC7.08□□□□□ -1.28
COL5A2P05997 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC7.08□□□□□ -1.28
COL5A2P05997 AC008033.2-201ENST00000542626 177 ntBASIC7.08□□□□□ -1.28
COL5A2P05997 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
COL5A2P05997 NLRP3P1-201ENST00000622303 1785 ntBASIC7.08□□□□□ -1.28
COL5A2P05997 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC7.08□□□□□ -1.28
COL5A2P05997 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC7.08□□□□□ -1.28
COL5A2P05997 RPL37-201ENST00000274242 7686 ntAPPRIS P2 TSL 1 (best) BASIC7.08□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 71.1 ms