Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
HLA-DQB2P05538 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
HLA-DQB2P05538 LINC01951-201ENST00000377300 1925 ntTSL 2 BASIC5.52□□□□□ -1.53
HLA-DQB2P05538 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
HLA-DQB2P05538 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
HLA-DQB2P05538 GKN2-202ENST00000481498 1498 ntTSL 2 BASIC5.52□□□□□ -1.53
HLA-DQB2P05538 PLCH1-AS1-201ENST00000475196 1308 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
HLA-DQB2P05538 AQP4-201ENST00000383168 5274 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
HLA-DQB2P05538 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC5.52□□□□□ -1.53
HLA-DQB2P05538 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
HLA-DQB2P05538 PGM3-211ENST00000512866 2013 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
HLA-DQB2P05538 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
HLA-DQB2P05538 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC5.52□□□□□ -1.53
HLA-DQB2P05538 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
HLA-DQB2P05538 ITGB3BP-201ENST00000271002 948 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
HLA-DQB2P05538 MIR133B-201ENST00000362210 119 ntBASIC5.52□□□□□ -1.53
HLA-DQB2P05538 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
HLA-DQB2P05538 DBIP1-201ENST00000401435 260 ntBASIC5.52□□□□□ -1.53
HLA-DQB2P05538 RN7SKP293-201ENST00000411389 296 ntBASIC5.52□□□□□ -1.53
HLA-DQB2P05538 SRSF1P1-201ENST00000424058 520 ntBASIC5.52□□□□□ -1.53
HLA-DQB2P05538 PRUNEP1-201ENST00000425846 705 ntBASIC5.52□□□□□ -1.53
HLA-DQB2P05538 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC5.52□□□□□ -1.53
HLA-DQB2P05538 AC105399.1-202ENST00000447303 205 ntBASIC5.52□□□□□ -1.53
HLA-DQB2P05538 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC5.52□□□□□ -1.53
HLA-DQB2P05538 LINC01780-202ENST00000457683 391 ntTSL 3 BASIC5.52□□□□□ -1.53
HLA-DQB2P05538 RPSAP39-201ENST00000467439 883 ntBASIC5.52□□□□□ -1.53
HLA-DQB2P05538 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
HLA-DQB2P05538 RABGAP1L-214ENST00000478442 648 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
HLA-DQB2P05538 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC5.52□□□□□ -1.53
HLA-DQB2P05538 RNA5SP362-201ENST00000516048 118 ntBASIC5.52□□□□□ -1.53
HLA-DQB2P05538 AC079015.1-201ENST00000521793 596 ntTSL 2 BASIC5.52□□□□□ -1.53
HLA-DQB2P05538 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC5.52□□□□□ -1.53
HLA-DQB2P05538 AC073569.1-201ENST00000548469 667 ntTSL 2 BASIC5.52□□□□□ -1.53
HLA-DQB2P05538 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC5.52□□□□□ -1.53
HLA-DQB2P05538 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
HLA-DQB2P05538 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
HLA-DQB2P05538 ALB-202ENST00000401494 1659 ntTSL 5 BASIC5.52□□□□□ -1.53
HLA-DQB2P05538 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC5.52□□□□□ -1.53
HLA-DQB2P05538 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC5.52□□□□□ -1.53
HLA-DQB2P05538 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
HLA-DQB2P05538 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
HLA-DQB2P05538 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
HLA-DQB2P05538 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
HLA-DQB2P05538 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
HLA-DQB2P05538 ALB-209ENST00000503124 1741 ntTSL 5 BASIC5.51□□□□□ -1.53
HLA-DQB2P05538 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC5.51□□□□□ -1.53
HLA-DQB2P05538 AC092451.3-201ENST00000625067 1343 ntBASIC5.51□□□□□ -1.53
HLA-DQB2P05538 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
HLA-DQB2P05538 ZNF402P-201ENST00000404435 3100 ntBASIC5.51□□□□□ -1.53
HLA-DQB2P05538 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
HLA-DQB2P05538 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
HLA-DQB2P05538 PMCHL2-202ENST00000450213 1917 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
HLA-DQB2P05538 RNA5SP319-201ENST00000362768 119 ntBASIC5.51□□□□□ -1.53
HLA-DQB2P05538 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
HLA-DQB2P05538 BPHL-201ENST00000380368 797 ntTSL 5 BASIC5.51□□□□□ -1.53
HLA-DQB2P05538 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC5.51□□□□□ -1.53
HLA-DQB2P05538 AC005008.2-201ENST00000431501 715 ntTSL 3 BASIC5.51□□□□□ -1.53
HLA-DQB2P05538 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC5.51□□□□□ -1.53
HLA-DQB2P05538 NPM1P18-201ENST00000434232 732 ntBASIC5.51□□□□□ -1.53
HLA-DQB2P05538 GSTM5P1-201ENST00000434751 660 ntBASIC5.51□□□□□ -1.53
HLA-DQB2P05538 AL672138.1-201ENST00000450604 1015 ntBASIC5.51□□□□□ -1.53
HLA-DQB2P05538 AC013549.1-201ENST00000454086 566 ntTSL 3 BASIC5.51□□□□□ -1.53
HLA-DQB2P05538 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
HLA-DQB2P05538 RN7SL51P-201ENST00000468230 285 ntBASIC5.51□□□□□ -1.53
HLA-DQB2P05538 AC100832.1-201ENST00000471945 383 ntBASIC5.51□□□□□ -1.53
HLA-DQB2P05538 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC5.51□□□□□ -1.53
HLA-DQB2P05538 SCARNA16.4-201ENST00000516956 187 ntBASIC5.51□□□□□ -1.53
HLA-DQB2P05538 AP004607.2-201ENST00000533949 322 ntBASIC5.51□□□□□ -1.53
HLA-DQB2P05538 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC5.51□□□□□ -1.53
HLA-DQB2P05538 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC5.51□□□□□ -1.53
HLA-DQB2P05538 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC5.51□□□□□ -1.53
HLA-DQB2P05538 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
HLA-DQB2P05538 ULK4P1-201ENST00000564495 875 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
HLA-DQB2P05538 ULK4P2-204ENST00000569682 798 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
HLA-DQB2P05538 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
HLA-DQB2P05538 AL589674.2-201ENST00000604304 337 ntBASIC5.51□□□□□ -1.53
HLA-DQB2P05538 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC5.51□□□□□ -1.53
HLA-DQB2P05538 MIR8080-201ENST00000622224 89 ntBASIC5.51□□□□□ -1.53
HLA-DQB2P05538 LINC01125-249ENST00000627399 1067 ntAPPRIS P5 TSL 5 BASIC5.51□□□□□ -1.53
HLA-DQB2P05538 AP2B1-222ENST00000628168 192 ntTSL 5 BASIC5.51□□□□□ -1.53
HLA-DQB2P05538 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
HLA-DQB2P05538 AC006600.2-201ENST00000624834 2506 ntBASIC5.51□□□□□ -1.53
HLA-DQB2P05538 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC5.51□□□□□ -1.53
HLA-DQB2P05538 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
HLA-DQB2P05538 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
HLA-DQB2P05538 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
HLA-DQB2P05538 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC5.51□□□□□ -1.53
HLA-DQB2P05538 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
HLA-DQB2P05538 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
HLA-DQB2P05538 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC5.51□□□□□ -1.53
HLA-DQB2P05538 VEZF1-204ENST00000584396 2342 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
HLA-DQB2P05538 SAMMSON-210ENST00000641260 1308 ntBASIC5.5□□□□□ -1.53
HLA-DQB2P05538 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
HLA-DQB2P05538 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
HLA-DQB2P05538 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC5.5□□□□□ -1.53
HLA-DQB2P05538 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
HLA-DQB2P05538 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC5.5□□□□□ -1.53
HLA-DQB2P05538 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.53
HLA-DQB2P05538 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC5.5□□□□□ -1.53
HLA-DQB2P05538 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 94.4 ms