Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC5.89□□□□□ -1.47
APOEP02649 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC5.89□□□□□ -1.47
APOEP02649 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
APOEP02649 SRRM1P3-201ENST00000426911 2678 ntBASIC5.89□□□□□ -1.47
APOEP02649 AC093849.1-201ENST00000563631 2209 ntBASIC5.89□□□□□ -1.47
APOEP02649 OR5B12-201ENST00000302572 1054 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
APOEP02649 HBG1-201ENST00000330597 808 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
APOEP02649 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC5.89□□□□□ -1.47
APOEP02649 MIR323A-201ENST00000362199 86 ntBASIC5.89□□□□□ -1.47
APOEP02649 RN7SKP69-201ENST00000365390 305 ntBASIC5.89□□□□□ -1.47
APOEP02649 NENFP1-201ENST00000419476 466 ntBASIC5.89□□□□□ -1.47
APOEP02649 AC005008.2-201ENST00000431501 715 ntTSL 3 BASIC5.89□□□□□ -1.47
APOEP02649 AC099670.2-201ENST00000435130 321 ntBASIC5.89□□□□□ -1.47
APOEP02649 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC5.89□□□□□ -1.47
APOEP02649 RN7SL273P-201ENST00000481561 299 ntBASIC5.89□□□□□ -1.47
APOEP02649 RPS7P6-201ENST00000485777 579 ntBASIC5.89□□□□□ -1.47
APOEP02649 AC138866.2-201ENST00000508650 584 ntBASIC5.89□□□□□ -1.47
APOEP02649 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC5.89□□□□□ -1.47
APOEP02649 AC084824.2-201ENST00000548906 345 ntBASIC5.89□□□□□ -1.47
APOEP02649 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC5.89□□□□□ -1.47
APOEP02649 AC114947.2-202ENST00000569313 643 ntTSL 3 BASIC5.89□□□□□ -1.47
APOEP02649 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC5.89□□□□□ -1.47
APOEP02649 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC5.89□□□□□ -1.47
APOEP02649 OR51C1P-201ENST00000608504 942 ntBASIC5.89□□□□□ -1.47
APOEP02649 Z95327.3-201ENST00000610385 572 ntBASIC5.89□□□□□ -1.47
APOEP02649 LINC01125-249ENST00000627399 1067 ntAPPRIS P5 TSL 5 BASIC5.89□□□□□ -1.47
APOEP02649 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC5.89□□□□□ -1.47
APOEP02649 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC5.89□□□□□ -1.47
APOEP02649 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC5.89□□□□□ -1.47
APOEP02649 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
APOEP02649 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
APOEP02649 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
APOEP02649 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC5.88□□□□□ -1.47
APOEP02649 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC5.88□□□□□ -1.47
APOEP02649 AFP-201ENST00000226359 1914 ntTSL 5 BASIC5.88□□□□□ -1.47
APOEP02649 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
APOEP02649 ITGB3BP-201ENST00000271002 948 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
APOEP02649 AL158827.1-201ENST00000416300 391 ntBASIC5.88□□□□□ -1.47
APOEP02649 BMS1P17-202ENST00000416720 316 ntBASIC5.88□□□□□ -1.47
APOEP02649 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC5.88□□□□□ -1.47
APOEP02649 AL669841.1-201ENST00000425723 558 ntTSL 2 BASIC5.88□□□□□ -1.47
APOEP02649 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC5.88□□□□□ -1.47
APOEP02649 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC5.88□□□□□ -1.47
APOEP02649 AL450996.1-201ENST00000445574 1202 ntBASIC5.88□□□□□ -1.47
APOEP02649 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC5.88□□□□□ -1.47
APOEP02649 GLUD1P3-202ENST00000508551 200 ntBASIC5.88□□□□□ -1.47
APOEP02649 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC5.88□□□□□ -1.47
APOEP02649 AC111000.6-201ENST00000514471 709 ntBASIC5.88□□□□□ -1.47
APOEP02649 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC5.88□□□□□ -1.47
APOEP02649 PFDN1-207ENST00000524074 395 ntTSL 5 BASIC5.88□□□□□ -1.47
APOEP02649 AC139697.1-201ENST00000548429 745 ntBASIC5.88□□□□□ -1.47
APOEP02649 AC022404.1-201ENST00000555320 273 ntBASIC5.88□□□□□ -1.47
APOEP02649 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC5.88□□□□□ -1.47
APOEP02649 RBM22P12-201ENST00000567098 1255 ntBASIC5.88□□□□□ -1.47
APOEP02649 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC5.88□□□□□ -1.47
APOEP02649 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC5.88□□□□□ -1.47
APOEP02649 AC012146.2-201ENST00000576545 416 ntBASIC5.88□□□□□ -1.47
APOEP02649 MIR4505-201ENST00000582238 73 ntBASIC5.88□□□□□ -1.47
APOEP02649 PIK3C3-207ENST00000587402 452 ntTSL 3 BASIC5.88□□□□□ -1.47
APOEP02649 HCG18-243ENST00000602498 327 ntTSL 3 BASIC5.88□□□□□ -1.47
APOEP02649 AC006363.1-201ENST00000603806 463 ntBASIC5.88□□□□□ -1.47
APOEP02649 AL035587.1-202ENST00000607218 984 ntTSL 3 BASIC5.88□□□□□ -1.47
APOEP02649 RNA5SP440-201ENST00000612665 119 ntBASIC5.88□□□□□ -1.47
APOEP02649 AC008115.3-201ENST00000614874 549 ntBASIC5.88□□□□□ -1.47
APOEP02649 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC5.88□□□□□ -1.47
APOEP02649 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
APOEP02649 AL035661.1-201ENST00000620459 1144 ntBASIC5.88□□□□□ -1.47
APOEP02649 CU638689.1-201ENST00000623225 897 ntTSL 3 BASIC5.88□□□□□ -1.47
APOEP02649 CU634019.4-201ENST00000623347 897 ntTSL 3 BASIC5.88□□□□□ -1.47
APOEP02649 AC007683.2-201ENST00000624681 714 ntBASIC5.88□□□□□ -1.47
APOEP02649 AC005618.4-201ENST00000625053 554 ntBASIC5.88□□□□□ -1.47
APOEP02649 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
APOEP02649 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC5.88□□□□□ -1.47
APOEP02649 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
APOEP02649 AC114786.1-201ENST00000512892 1415 ntBASIC5.88□□□□□ -1.47
APOEP02649 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
APOEP02649 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
APOEP02649 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC5.88□□□□□ -1.47
APOEP02649 YES1P1-201ENST00000418510 1628 ntBASIC5.88□□□□□ -1.47
APOEP02649 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
APOEP02649 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
APOEP02649 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC5.88□□□□□ -1.47
APOEP02649 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
APOEP02649 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC5.87□□□□□ -1.47
APOEP02649 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC5.87□□□□□ -1.47
APOEP02649 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC5.87□□□□□ -1.47
APOEP02649 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
APOEP02649 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
APOEP02649 RMST-209ENST00000639542 3269 ntTSL 5 BASIC5.87□□□□□ -1.47
APOEP02649 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
APOEP02649 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
APOEP02649 RNA5SP131-201ENST00000365452 119 ntBASIC5.87□□□□□ -1.47
APOEP02649 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC5.87□□□□□ -1.47
APOEP02649 TNPO1P1-201ENST00000423641 1138 ntBASIC5.87□□□□□ -1.47
APOEP02649 TEX41-206ENST00000432608 661 ntTSL 3 BASIC5.87□□□□□ -1.47
APOEP02649 TMEM183AP1-205ENST00000432739 290 ntBASIC5.87□□□□□ -1.47
APOEP02649 NPM1P19-201ENST00000450070 712 ntBASIC5.87□□□□□ -1.47
APOEP02649 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC5.87□□□□□ -1.47
APOEP02649 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC5.87□□□□□ -1.47
APOEP02649 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC5.87□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 121.6 ms