Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC5.39□□□□□ -1.55
CLPTM1O96005 AC010528.1-201ENST00000568714 739 ntTSL 4 BASIC5.39□□□□□ -1.55
CLPTM1O96005 TMF1P1-201ENST00000576058 373 ntBASIC5.39□□□□□ -1.55
CLPTM1O96005 MIR3936-201ENST00000584304 110 ntBASIC5.39□□□□□ -1.55
CLPTM1O96005 MIR7853-201ENST00000584820 132 ntBASIC5.39□□□□□ -1.55
CLPTM1O96005 SMIM12P1-201ENST00000603004 274 ntBASIC5.39□□□□□ -1.55
CLPTM1O96005 AL139124.1-201ENST00000609123 421 ntBASIC5.39□□□□□ -1.55
CLPTM1O96005 uc_338.26-201ENST00000612659 160 ntBASIC5.39□□□□□ -1.55
CLPTM1O96005 AC003001.2-201ENST00000616294 831 ntBASIC5.39□□□□□ -1.55
CLPTM1O96005 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CLPTM1O96005 AC073592.7-201ENST00000623659 507 ntBASIC5.39□□□□□ -1.55
CLPTM1O96005 AC020923.1-201ENST00000624021 917 ntBASIC5.39□□□□□ -1.55
CLPTM1O96005 AC104820.1-201ENST00000624183 307 ntBASIC5.39□□□□□ -1.55
CLPTM1O96005 AP000720.1-201ENST00000625091 483 ntBASIC5.39□□□□□ -1.55
CLPTM1O96005 LINC00969-332ENST00000630874 738 ntTSL 5 BASIC5.39□□□□□ -1.55
CLPTM1O96005 TTC33-206ENST00000636863 1149 ntTSL 5 BASIC5.39□□□□□ -1.55
CLPTM1O96005 OR2AK2-202ENST00000641852 1008 ntAPPRIS P2 BASIC5.39□□□□□ -1.55
CLPTM1O96005 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
CLPTM1O96005 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC5.39□□□□□ -1.55
CLPTM1O96005 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC5.39□□□□□ -1.55
CLPTM1O96005 AC025574.1-201ENST00000554784 1653 ntBASIC5.39□□□□□ -1.55
CLPTM1O96005 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CLPTM1O96005 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC5.39□□□□□ -1.55
CLPTM1O96005 UQCRC2P1-201ENST00000417777 1332 ntBASIC5.39□□□□□ -1.55
CLPTM1O96005 AC022417.1-201ENST00000624768 1303 ntBASIC5.39□□□□□ -1.55
CLPTM1O96005 OFD1P15Y-201ENST00000411536 1392 ntBASIC5.39□□□□□ -1.55
CLPTM1O96005 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC5.39□□□□□ -1.55
CLPTM1O96005 CASC19-248ENST00000641674 1356 ntBASIC5.39□□□□□ -1.55
CLPTM1O96005 AC093909.5-201ENST00000621839 1799 ntBASIC5.39□□□□□ -1.55
CLPTM1O96005 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CLPTM1O96005 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CLPTM1O96005 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC5.39□□□□□ -1.55
CLPTM1O96005 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CLPTM1O96005 AC104623.2-202ENST00000623477 4002 ntBASIC5.39□□□□□ -1.55
CLPTM1O96005 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CLPTM1O96005 INTS12-211ENST00000618810 1502 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
CLPTM1O96005 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC5.38□□□□□ -1.55
CLPTM1O96005 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
CLPTM1O96005 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CLPTM1O96005 PCAT14-202ENST00000627127 3935 ntBASIC5.38□□□□□ -1.55
CLPTM1O96005 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
CLPTM1O96005 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC5.38□□□□□ -1.55
CLPTM1O96005 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC5.38□□□□□ -1.55
CLPTM1O96005 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC5.38□□□□□ -1.55
CLPTM1O96005 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CLPTM1O96005 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
CLPTM1O96005 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CLPTM1O96005 RNA5SP346-201ENST00000363541 121 ntBASIC5.38□□□□□ -1.55
CLPTM1O96005 ADPRM-201ENST00000379774 1209 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CLPTM1O96005 AL139805.1-201ENST00000407837 289 ntBASIC5.38□□□□□ -1.55
CLPTM1O96005 RNA5SP296-201ENST00000410523 111 ntBASIC5.38□□□□□ -1.55
CLPTM1O96005 RN7SKP121-201ENST00000410842 305 ntBASIC5.38□□□□□ -1.55
CLPTM1O96005 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CLPTM1O96005 AC092865.3-201ENST00000425390 1026 ntBASIC5.38□□□□□ -1.55
CLPTM1O96005 FGF12-202ENST00000430714 603 ntTSL 2 BASIC5.38□□□□□ -1.55
CLPTM1O96005 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC5.38□□□□□ -1.55
CLPTM1O96005 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC5.38□□□□□ -1.55
CLPTM1O96005 OR52E3P-201ENST00000452083 936 ntBASIC5.38□□□□□ -1.55
CLPTM1O96005 SNORD125-201ENST00000459538 96 ntBASIC5.38□□□□□ -1.55
CLPTM1O96005 RNU7-157P-201ENST00000459600 66 ntBASIC5.38□□□□□ -1.55
CLPTM1O96005 RN7SL326P-201ENST00000477493 296 ntBASIC5.38□□□□□ -1.55
CLPTM1O96005 AC106864.2-201ENST00000505632 740 ntTSL 2 BASIC5.38□□□□□ -1.55
CLPTM1O96005 MGC32805-204ENST00000509993 783 ntTSL 2 BASIC5.38□□□□□ -1.55
CLPTM1O96005 KHDC1P1-201ENST00000511053 508 ntBASIC5.38□□□□□ -1.55
CLPTM1O96005 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC5.38□□□□□ -1.55
CLPTM1O96005 AP001858.2-201ENST00000536213 601 ntBASIC5.38□□□□□ -1.55
CLPTM1O96005 MRE11-209ENST00000540013 1212 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CLPTM1O96005 AL358913.1-201ENST00000554342 121 ntBASIC5.38□□□□□ -1.55
CLPTM1O96005 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CLPTM1O96005 AL161752.1-201ENST00000557721 263 ntTSL 2 BASIC5.38□□□□□ -1.55
CLPTM1O96005 AC013652.1-202ENST00000561058 570 ntTSL 4 BASIC5.38□□□□□ -1.55
CLPTM1O96005 MIR4502-201ENST00000580432 81 ntBASIC5.38□□□□□ -1.55
CLPTM1O96005 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC5.38□□□□□ -1.55
CLPTM1O96005 AC005544.1-201ENST00000584277 460 ntTSL 3 BASIC5.38□□□□□ -1.55
CLPTM1O96005 AC020909.2-201ENST00000595005 626 ntTSL 2 BASIC5.38□□□□□ -1.55
CLPTM1O96005 ZNF682-208ENST00000596019 552 ntTSL 5 BASIC5.38□□□□□ -1.55
CLPTM1O96005 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC5.38□□□□□ -1.55
CLPTM1O96005 AC005229.3-201ENST00000603438 323 ntBASIC5.38□□□□□ -1.55
CLPTM1O96005 NANOGP3-201ENST00000605855 286 ntBASIC5.38□□□□□ -1.55
CLPTM1O96005 AC022106.1-201ENST00000612834 766 ntBASIC5.38□□□□□ -1.55
CLPTM1O96005 LINC02033-201ENST00000623207 971 ntTSL 2 BASIC5.38□□□□□ -1.55
CLPTM1O96005 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC5.38□□□□□ -1.55
CLPTM1O96005 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
CLPTM1O96005 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CLPTM1O96005 AC119674.1-202ENST00000641333 1860 ntBASIC5.38□□□□□ -1.55
CLPTM1O96005 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CLPTM1O96005 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CLPTM1O96005 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC5.38□□□□□ -1.55
CLPTM1O96005 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC5.38□□□□□ -1.55
CLPTM1O96005 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
CLPTM1O96005 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC5.38□□□□□ -1.55
CLPTM1O96005 AC018717.1-201ENST00000457712 1505 ntBASIC5.38□□□□□ -1.55
CLPTM1O96005 SMG1-201ENST00000330588 1588 ntTSL 5 BASIC5.38□□□□□ -1.55
CLPTM1O96005 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CLPTM1O96005 CPS1-IT1-201ENST00000628368 2306 ntBASIC5.37□□□□□ -1.55
CLPTM1O96005 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC5.37□□□□□ -1.55
CLPTM1O96005 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
CLPTM1O96005 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CLPTM1O96005 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC5.37□□□□□ -1.55
CLPTM1O96005 AC097461.1-201ENST00000568928 2821 ntBASIC5.37□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 73.1 ms