Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC9.47□□□□□ -0.89
CUX2O14529 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
CUX2O14529 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC9.47□□□□□ -0.89
CUX2O14529 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC9.47□□□□□ -0.89
CUX2O14529 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC9.47□□□□□ -0.89
CUX2O14529 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC9.46□□□□□ -0.89
CUX2O14529 CTNND1-233ENST00000532787 5751 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
CUX2O14529 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC9.46□□□□□ -0.89
CUX2O14529 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
CUX2O14529 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.89
CUX2O14529 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
CUX2O14529 RAG1-201ENST00000299440 6564 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
CUX2O14529 LPA-201ENST00000316300 6414 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
CUX2O14529 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
CUX2O14529 GAGE1-204ENST00000619375 2873 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.9
CUX2O14529 REV3L-203ENST00000368805 10461 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.9
CUX2O14529 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC9.46□□□□□ -0.9
CUX2O14529 AC069213.2-201ENST00000420238 366 ntBASIC9.46□□□□□ -0.9
CUX2O14529 PPP2R2DP1-201ENST00000420526 637 ntBASIC9.46□□□□□ -0.9
CUX2O14529 AC007562.1-201ENST00000421819 517 ntBASIC9.46□□□□□ -0.9
CUX2O14529 AL731534.1-201ENST00000434711 269 ntBASIC9.46□□□□□ -0.9
CUX2O14529 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC9.46□□□□□ -0.9
CUX2O14529 AC023274.2-201ENST00000445264 521 ntBASIC9.46□□□□□ -0.9
CUX2O14529 MIR4429-201ENST00000580105 73 ntBASIC9.46□□□□□ -0.9
CUX2O14529 ZNF227-204ENST00000586228 569 ntTSL 2 BASIC9.46□□□□□ -0.9
CUX2O14529 AC008770.4-201ENST00000586394 468 ntTSL 3 BASIC9.46□□□□□ -0.9
CUX2O14529 AC067852.5-201ENST00000589299 310 ntBASIC9.46□□□□□ -0.9
CUX2O14529 AL034408.1-201ENST00000637712 664 ntBASIC9.46□□□□□ -0.9
CUX2O14529 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
CUX2O14529 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC9.46□□□□□ -0.9
CUX2O14529 MIR3681HG-201ENST00000412294 2183 ntTSL 2 BASIC9.46□□□□□ -0.9
CUX2O14529 IRF5P1-201ENST00000504852 2164 ntBASIC9.46□□□□□ -0.9
CUX2O14529 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
CUX2O14529 LINC01920-201ENST00000441356 2528 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
CUX2O14529 CEACAM5-202ENST00000398599 2451 ntAPPRIS ALT2 TSL 5 BASIC9.45□□□□□ -0.9
CUX2O14529 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC9.45□□□□□ -0.9
CUX2O14529 PSMC6-219ENST00000612399 1590 ntAPPRIS P2 TSL 1 (best) BASIC9.45□□□□□ -0.9
CUX2O14529 LIG3-202ENST00000378526 8400 ntAPPRIS P4 TSL 1 (best) BASIC9.45□□□□□ -0.9
CUX2O14529 CYP2C8-201ENST00000371270 1923 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
CUX2O14529 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC9.45□□□□□ -0.9
CUX2O14529 RPS29-202ENST00000396020 7062 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
CUX2O14529 PLRG1-202ENST00000499023 3351 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
CUX2O14529 DCP2-201ENST00000389063 8947 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
CUX2O14529 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC9.45□□□□□ -0.9
CUX2O14529 SVBP-202ENST00000372522 650 ntAPPRIS P1 TSL 3 BASIC9.45□□□□□ -0.9
CUX2O14529 SNORA16A-201ENST00000384342 137 ntBASIC9.45□□□□□ -0.9
CUX2O14529 EIF4EBP2P3-201ENST00000403144 334 ntBASIC9.45□□□□□ -0.9
CUX2O14529 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
CUX2O14529 RN7SKP151-201ENST00000410230 316 ntBASIC9.45□□□□□ -0.9
CUX2O14529 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC9.45□□□□□ -0.9
CUX2O14529 ATP6V0E1P2-201ENST00000441771 245 ntBASIC9.45□□□□□ -0.9
CUX2O14529 AC092647.2-201ENST00000452998 253 ntBASIC9.45□□□□□ -0.9
CUX2O14529 TEK-204ENST00000519097 3836 ntTSL 2 BASIC9.45□□□□□ -0.9
CUX2O14529 MAL2-207ENST00000522828 603 ntTSL 3 BASIC9.45□□□□□ -0.9
CUX2O14529 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC9.45□□□□□ -0.9
CUX2O14529 AP002373.2-201ENST00000541631 1060 ntBASIC9.45□□□□□ -0.9
CUX2O14529 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC9.45□□□□□ -0.9
CUX2O14529 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
CUX2O14529 AL356752.1-201ENST00000615844 593 ntBASIC9.45□□□□□ -0.9
CUX2O14529 MIR6830-201ENST00000636015 70 ntBASIC9.45□□□□□ -0.9
CUX2O14529 ZNF484-204ENST00000395506 4031 ntTSL 3 BASIC9.45□□□□□ -0.9
CUX2O14529 NUP214-202ENST00000411637 7538 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
CUX2O14529 SPRYD4-201ENST00000338146 10779 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
CUX2O14529 CORIN-201ENST00000273857 4852 ntAPPRIS P2 TSL 1 (best) BASIC9.45□□□□□ -0.9
CUX2O14529 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC9.45□□□□□ -0.9
CUX2O14529 ZNF652-201ENST00000362063 5988 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
CUX2O14529 UPRT-207ENST00000530743 1636 ntTSL 2 BASIC9.44□□□□□ -0.9
CUX2O14529 ABCA1-202ENST00000374736 10494 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
CUX2O14529 FNDC7-201ENST00000370017 3332 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
CUX2O14529 STXBP5-203ENST00000367480 3297 ntTSL 5 BASIC9.44□□□□□ -0.9
CUX2O14529 DDX39BP1-205ENST00000422507 192 ntBASIC9.44□□□□□ -0.9
CUX2O14529 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC9.44□□□□□ -0.9
CUX2O14529 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC9.44□□□□□ -0.9
CUX2O14529 MIR2117-201ENST00000516780 80 ntBASIC9.44□□□□□ -0.9
CUX2O14529 AC090424.1-201ENST00000535243 736 ntBASIC9.44□□□□□ -0.9
CUX2O14529 AL109766.1-201ENST00000555080 552 ntBASIC9.44□□□□□ -0.9
CUX2O14529 CASC22-201ENST00000569713 386 ntTSL 5 BASIC9.44□□□□□ -0.9
CUX2O14529 AP005230.1-203ENST00000582086 887 ntTSL 2 BASIC9.44□□□□□ -0.9
CUX2O14529 AC125494.2-201ENST00000602431 657 ntBASIC9.44□□□□□ -0.9
CUX2O14529 AC090607.5-201ENST00000615692 224 ntBASIC9.44□□□□□ -0.9
CUX2O14529 AP001885.1-201ENST00000621658 558 ntBASIC9.44□□□□□ -0.9
CUX2O14529 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC9.44□□□□□ -0.9
CUX2O14529 AC074101.1-201ENST00000637861 241 ntBASIC9.44□□□□□ -0.9
CUX2O14529 CDK12-202ENST00000447079 8336 ntAPPRIS P3 TSL 1 (best) BASIC9.44□□□□□ -0.9
CUX2O14529 MAGEB16-204ENST00000399989 1818 ntAPPRIS P2 TSL 5 BASIC9.44□□□□□ -0.9
CUX2O14529 IBTK-210ENST00000610980 5195 ntTSL 5 BASIC9.44□□□□□ -0.9
CUX2O14529 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC9.44□□□□□ -0.9
CUX2O14529 NRXN3-203ENST00000428277 4219 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
CUX2O14529 HMCN2-206ENST00000624552 15610 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
CUX2O14529 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC9.44□□□□□ -0.9
CUX2O14529 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
CUX2O14529 BTBD10-210ENST00000530907 1871 ntAPPRIS ALT1 TSL 2 BASIC9.43□□□□□ -0.9
CUX2O14529 ZNF639-201ENST00000326361 6064 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
CUX2O14529 RUNX1T1-201ENST00000265814 7284 ntAPPRIS P3 TSL 5 BASIC9.43□□□□□ -0.9
CUX2O14529 LUZP2-201ENST00000336930 3553 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
CUX2O14529 VTCN1-202ENST00000359008 2581 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
CUX2O14529 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
CUX2O14529 SPOCK1-201ENST00000282223 4488 ntTSL 5 BASIC9.43□□□□□ -0.9
CUX2O14529 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
CUX2O14529 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC9.43□□□□□ -0.9
Retrieved 100 of 98,524 protein–RNA pairs in 88.4 ms