Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 MIR130A-201ENST00000385274 89 ntBASIC4.26□□□□□ -1.73
HLA-DRB4X5D2U9 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
HLA-DRB4X5D2U9 OR7E101P-201ENST00000400428 513 ntBASIC4.26□□□□□ -1.73
HLA-DRB4X5D2U9 LSM5-203ENST00000409782 649 ntTSL 5 BASIC4.26□□□□□ -1.73
HLA-DRB4X5D2U9 AL445213.1-201ENST00000412589 747 ntBASIC4.26□□□□□ -1.73
HLA-DRB4X5D2U9 MRPL53P1-201ENST00000414323 319 ntBASIC4.26□□□□□ -1.73
HLA-DRB4X5D2U9 MIRLET7DHG-201ENST00000416309 1294 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
HLA-DRB4X5D2U9 AC066692.1-201ENST00000421721 457 ntBASIC4.26□□□□□ -1.73
HLA-DRB4X5D2U9 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC4.26□□□□□ -1.73
HLA-DRB4X5D2U9 FGF12-202ENST00000430714 603 ntTSL 2 BASIC4.26□□□□□ -1.73
HLA-DRB4X5D2U9 AC242426.1-201ENST00000435270 960 ntBASIC4.26□□□□□ -1.73
HLA-DRB4X5D2U9 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC4.26□□□□□ -1.73
HLA-DRB4X5D2U9 RPS23P9-201ENST00000448848 438 ntBASIC4.26□□□□□ -1.73
HLA-DRB4X5D2U9 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC4.26□□□□□ -1.73
HLA-DRB4X5D2U9 AC073130.1-202ENST00000454897 587 ntTSL 2 BASIC4.26□□□□□ -1.73
HLA-DRB4X5D2U9 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC4.26□□□□□ -1.73
HLA-DRB4X5D2U9 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC4.26□□□□□ -1.73
HLA-DRB4X5D2U9 RPS17P15-201ENST00000475609 349 ntBASIC4.26□□□□□ -1.73
HLA-DRB4X5D2U9 ST20-201ENST00000478497 1004 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
HLA-DRB4X5D2U9 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC4.26□□□□□ -1.73
HLA-DRB4X5D2U9 NENFP3-201ENST00000503735 313 ntBASIC4.26□□□□□ -1.73
HLA-DRB4X5D2U9 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC4.26□□□□□ -1.73
HLA-DRB4X5D2U9 AC114781.3-201ENST00000512083 142 ntBASIC4.26□□□□□ -1.73
HLA-DRB4X5D2U9 PDE4D-225ENST00000515835 590 ntTSL 4 BASIC4.26□□□□□ -1.73
HLA-DRB4X5D2U9 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC4.26□□□□□ -1.73
HLA-DRB4X5D2U9 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC4.26□□□□□ -1.73
HLA-DRB4X5D2U9 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC4.26□□□□□ -1.73
HLA-DRB4X5D2U9 AC068305.2-201ENST00000550567 1205 ntBASIC4.26□□□□□ -1.73
HLA-DRB4X5D2U9 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC4.26□□□□□ -1.73
HLA-DRB4X5D2U9 AC106730.2-201ENST00000566641 540 ntBASIC4.26□□□□□ -1.73
HLA-DRB4X5D2U9 AC092121.1-201ENST00000569452 202 ntBASIC4.26□□□□□ -1.73
HLA-DRB4X5D2U9 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC4.26□□□□□ -1.73
HLA-DRB4X5D2U9 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC4.26□□□□□ -1.73
HLA-DRB4X5D2U9 AC134669.1-201ENST00000581275 672 ntBASIC4.26□□□□□ -1.73
HLA-DRB4X5D2U9 AL499605.1-201ENST00000604628 403 ntBASIC4.26□□□□□ -1.73
HLA-DRB4X5D2U9 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC4.26□□□□□ -1.73
HLA-DRB4X5D2U9 LINC01206-233ENST00000630063 878 ntTSL 5 BASIC4.26□□□□□ -1.73
HLA-DRB4X5D2U9 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC4.26□□□□□ -1.73
HLA-DRB4X5D2U9 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC4.26□□□□□ -1.73
HLA-DRB4X5D2U9 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
HLA-DRB4X5D2U9 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
HLA-DRB4X5D2U9 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC4.26□□□□□ -1.73
HLA-DRB4X5D2U9 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC4.26□□□□□ -1.73
HLA-DRB4X5D2U9 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
HLA-DRB4X5D2U9 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
HLA-DRB4X5D2U9 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC4.26□□□□□ -1.73
HLA-DRB4X5D2U9 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC4.26□□□□□ -1.73
HLA-DRB4X5D2U9 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
HLA-DRB4X5D2U9 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC4.26□□□□□ -1.73
HLA-DRB4X5D2U9 TNFSF11-202ENST00000358545 1520 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
HLA-DRB4X5D2U9 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
HLA-DRB4X5D2U9 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC4.26□□□□□ -1.73
HLA-DRB4X5D2U9 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
HLA-DRB4X5D2U9 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC4.25□□□□□ -1.73
HLA-DRB4X5D2U9 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
HLA-DRB4X5D2U9 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
HLA-DRB4X5D2U9 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
HLA-DRB4X5D2U9 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
HLA-DRB4X5D2U9 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
HLA-DRB4X5D2U9 AC023490.2-201ENST00000359859 470 ntBASIC4.25□□□□□ -1.73
HLA-DRB4X5D2U9 RNU1-136P-201ENST00000384181 164 ntBASIC4.25□□□□□ -1.73
HLA-DRB4X5D2U9 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC4.25□□□□□ -1.73
HLA-DRB4X5D2U9 RPS3AP2-201ENST00000407190 754 ntBASIC4.25□□□□□ -1.73
HLA-DRB4X5D2U9 NIFKP3-201ENST00000417799 865 ntBASIC4.25□□□□□ -1.73
HLA-DRB4X5D2U9 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
HLA-DRB4X5D2U9 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC4.25□□□□□ -1.73
HLA-DRB4X5D2U9 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC4.25□□□□□ -1.73
HLA-DRB4X5D2U9 AL022331.1-201ENST00000429025 477 ntBASIC4.25□□□□□ -1.73
HLA-DRB4X5D2U9 AL512637.1-201ENST00000439523 1231 ntBASIC4.25□□□□□ -1.73
HLA-DRB4X5D2U9 DCN-205ENST00000441303 519 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
HLA-DRB4X5D2U9 HLA-DPA3-207ENST00000454398 229 ntBASIC4.25□□□□□ -1.73
HLA-DRB4X5D2U9 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
HLA-DRB4X5D2U9 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
HLA-DRB4X5D2U9 AC022215.1-201ENST00000481770 362 ntBASIC4.25□□□□□ -1.73
HLA-DRB4X5D2U9 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC4.25□□□□□ -1.73
HLA-DRB4X5D2U9 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC4.25□□□□□ -1.73
HLA-DRB4X5D2U9 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC4.25□□□□□ -1.73
HLA-DRB4X5D2U9 RNA5SP271-201ENST00000516700 88 ntBASIC4.25□□□□□ -1.73
HLA-DRB4X5D2U9 SNORA70.20-201ENST00000516848 126 ntBASIC4.25□□□□□ -1.73
HLA-DRB4X5D2U9 SCARNA6.1-201ENST00000516989 238 ntBASIC4.25□□□□□ -1.73
HLA-DRB4X5D2U9 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC4.25□□□□□ -1.73
HLA-DRB4X5D2U9 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC4.25□□□□□ -1.73
HLA-DRB4X5D2U9 MIR4472-2-201ENST00000582069 67 ntBASIC4.25□□□□□ -1.73
HLA-DRB4X5D2U9 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC4.25□□□□□ -1.73
HLA-DRB4X5D2U9 AC090415.2-201ENST00000584078 374 ntTSL 3 BASIC4.25□□□□□ -1.73
HLA-DRB4X5D2U9 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC4.25□□□□□ -1.73
HLA-DRB4X5D2U9 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC4.25□□□□□ -1.73
HLA-DRB4X5D2U9 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC4.25□□□□□ -1.73
HLA-DRB4X5D2U9 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC4.25□□□□□ -1.73
HLA-DRB4X5D2U9 BNIP3P41-202ENST00000616656 861 ntBASIC4.25□□□□□ -1.73
HLA-DRB4X5D2U9 AC022919.1-201ENST00000624979 626 ntBASIC4.25□□□□□ -1.73
HLA-DRB4X5D2U9 5S_rRNA.28-201ENST00000638107 119 ntBASIC4.25□□□□□ -1.73
HLA-DRB4X5D2U9 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC4.25□□□□□ -1.73
HLA-DRB4X5D2U9 SAMMSON-227ENST00000642114 1199 ntBASIC4.25□□□□□ -1.73
HLA-DRB4X5D2U9 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC4.25□□□□□ -1.73
HLA-DRB4X5D2U9 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC4.25□□□□□ -1.73
HLA-DRB4X5D2U9 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
HLA-DRB4X5D2U9 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
HLA-DRB4X5D2U9 NEPNP-201ENST00000404786 1371 ntBASIC4.25□□□□□ -1.73
HLA-DRB4X5D2U9 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 74.9 ms