Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 LINC01704-201ENST00000414848 834 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
LINC01558Q9Y6Z2 AL353651.1-201ENST00000415629 355 ntTSL 5 BASIC2.73□□□□□ -1.97
LINC01558Q9Y6Z2 NUCB1-AS1-201ENST00000416432 433 ntTSL 2 BASIC2.73□□□□□ -1.97
LINC01558Q9Y6Z2 LINC01291-202ENST00000418204 441 ntTSL 5 BASIC2.73□□□□□ -1.97
LINC01558Q9Y6Z2 LINC01241-201ENST00000423326 1237 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
LINC01558Q9Y6Z2 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC2.73□□□□□ -1.97
LINC01558Q9Y6Z2 CKS1BP6-201ENST00000424932 240 ntBASIC2.73□□□□□ -1.97
LINC01558Q9Y6Z2 NAP1L4P2-201ENST00000425958 899 ntBASIC2.73□□□□□ -1.97
LINC01558Q9Y6Z2 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC2.73□□□□□ -1.97
LINC01558Q9Y6Z2 RPS7P14-201ENST00000426405 583 ntBASIC2.73□□□□□ -1.97
LINC01558Q9Y6Z2 AC124944.2-201ENST00000429866 1242 ntBASIC2.73□□□□□ -1.97
LINC01558Q9Y6Z2 HTR3E-AS1-201ENST00000431427 515 ntTSL 4 BASIC2.73□□□□□ -1.97
LINC01558Q9Y6Z2 AC013410.1-201ENST00000436223 1232 ntBASIC2.73□□□□□ -1.97
LINC01558Q9Y6Z2 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC2.73□□□□□ -1.97
LINC01558Q9Y6Z2 GAPDHP58-201ENST00000438477 1006 ntBASIC2.73□□□□□ -1.97
LINC01558Q9Y6Z2 RPS10P3-201ENST00000439253 494 ntBASIC2.73□□□□□ -1.97
LINC01558Q9Y6Z2 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC2.73□□□□□ -1.97
LINC01558Q9Y6Z2 RPL12P44-201ENST00000442319 502 ntBASIC2.73□□□□□ -1.97
LINC01558Q9Y6Z2 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC2.73□□□□□ -1.97
LINC01558Q9Y6Z2 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC2.73□□□□□ -1.97
LINC01558Q9Y6Z2 RHEBP2-201ENST00000450289 600 ntBASIC2.73□□□□□ -1.97
LINC01558Q9Y6Z2 AC016027.4-201ENST00000450866 277 ntBASIC2.73□□□□□ -1.97
LINC01558Q9Y6Z2 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC2.73□□□□□ -1.97
LINC01558Q9Y6Z2 AC093166.2-201ENST00000455969 1017 ntBASIC2.73□□□□□ -1.97
LINC01558Q9Y6Z2 L29074.1-201ENST00000456072 534 ntTSL 5 BASIC2.73□□□□□ -1.97
LINC01558Q9Y6Z2 RNU6-599P-201ENST00000459383 107 ntBASIC2.73□□□□□ -1.97
LINC01558Q9Y6Z2 RNU6-1193P-201ENST00000459461 107 ntBASIC2.73□□□□□ -1.97
LINC01558Q9Y6Z2 AL121721.1-201ENST00000460400 568 ntTSL 4 BASIC2.73□□□□□ -1.97
LINC01558Q9Y6Z2 RN7SL508P-201ENST00000464472 303 ntBASIC2.73□□□□□ -1.97
LINC01558Q9Y6Z2 RPL23AP65-201ENST00000475608 468 ntBASIC2.73□□□□□ -1.97
LINC01558Q9Y6Z2 RN7SL369P-201ENST00000477138 299 ntBASIC2.73□□□□□ -1.97
LINC01558Q9Y6Z2 RPS10P28-201ENST00000480396 498 ntBASIC2.73□□□□□ -1.97
LINC01558Q9Y6Z2 AC098583.1-201ENST00000480875 255 ntBASIC2.73□□□□□ -1.97
LINC01558Q9Y6Z2 AC078785.1-205ENST00000491578 482 ntTSL 4 BASIC2.73□□□□□ -1.97
LINC01558Q9Y6Z2 AC104971.1-201ENST00000495117 578 ntBASIC2.73□□□□□ -1.97
LINC01558Q9Y6Z2 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC2.73□□□□□ -1.97
LINC01558Q9Y6Z2 AC116345.3-201ENST00000508255 449 ntTSL 3 BASIC2.73□□□□□ -1.97
LINC01558Q9Y6Z2 LINC01184-206ENST00000508878 968 ntTSL 5 BASIC2.73□□□□□ -1.97
LINC01558Q9Y6Z2 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC2.73□□□□□ -1.97
LINC01558Q9Y6Z2 AC126755.2-209ENST00000531453 699 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
LINC01558Q9Y6Z2 CYCSP28-201ENST00000534284 321 ntBASIC2.73□□□□□ -1.97
LINC01558Q9Y6Z2 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC2.73□□□□□ -1.97
LINC01558Q9Y6Z2 AC138969.1-212ENST00000541593 699 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
LINC01558Q9Y6Z2 NPIPA5-203ENST00000543801 699 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
LINC01558Q9Y6Z2 AC079793.1-201ENST00000553076 713 ntTSL 4 BASIC2.73□□□□□ -1.97
LINC01558Q9Y6Z2 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC2.73□□□□□ -1.97
LINC01558Q9Y6Z2 AC008056.2-201ENST00000553812 551 ntTSL 5 BASIC2.73□□□□□ -1.97
LINC01558Q9Y6Z2 AC092868.2-201ENST00000558749 497 ntTSL 3 BASIC2.73□□□□□ -1.97
LINC01558Q9Y6Z2 AC024270.1-201ENST00000559181 404 ntBASIC2.73□□□□□ -1.97
LINC01558Q9Y6Z2 SOD1P2-201ENST00000563903 451 ntBASIC2.73□□□□□ -1.97
LINC01558Q9Y6Z2 AC020909.3-201ENST00000598194 375 ntTSL 3 BASIC2.73□□□□□ -1.97
LINC01558Q9Y6Z2 DIMT1P1-201ENST00000603970 763 ntBASIC2.73□□□□□ -1.97
LINC01558Q9Y6Z2 AC008626.1-201ENST00000604384 255 ntBASIC2.73□□□□□ -1.97
LINC01558Q9Y6Z2 HNRNPA3P9-201ENST00000604913 979 ntBASIC2.73□□□□□ -1.97
LINC01558Q9Y6Z2 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC2.73□□□□□ -1.97
LINC01558Q9Y6Z2 SNORD96A-201ENST00000606577 79 ntBASIC2.73□□□□□ -1.97
LINC01558Q9Y6Z2 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC2.73□□□□□ -1.97
LINC01558Q9Y6Z2 SNORA74.4-201ENST00000607595 199 ntBASIC2.73□□□□□ -1.97
LINC01558Q9Y6Z2 AL591686.2-201ENST00000608241 475 ntTSL 4 BASIC2.73□□□□□ -1.97
LINC01558Q9Y6Z2 SSX3-204ENST00000612497 1030 ntTSL 5 BASIC2.73□□□□□ -1.97
LINC01558Q9Y6Z2 BACH1-AS1-202ENST00000615718 700 ntTSL 5 BASIC2.73□□□□□ -1.97
LINC01558Q9Y6Z2 RNU6-368P-201ENST00000620928 107 ntBASIC2.73□□□□□ -1.97
LINC01558Q9Y6Z2 RNU6-538P-201ENST00000622329 107 ntBASIC2.73□□□□□ -1.97
LINC01558Q9Y6Z2 AC110769.3-201ENST00000624567 1173 ntBASIC2.73□□□□□ -1.97
LINC01558Q9Y6Z2 LINC01670-203ENST00000624859 977 ntTSL 3 BASIC2.73□□□□□ -1.97
LINC01558Q9Y6Z2 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC2.73□□□□□ -1.97
LINC01558Q9Y6Z2 AC239809.3-202ENST00000628902 686 ntTSL 5 BASIC2.73□□□□□ -1.97
LINC01558Q9Y6Z2 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC2.73□□□□□ -1.97
LINC01558Q9Y6Z2 HYKK-205ENST00000566332 1422 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
LINC01558Q9Y6Z2 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC2.73□□□□□ -1.97
LINC01558Q9Y6Z2 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC2.73□□□□□ -1.97
LINC01558Q9Y6Z2 N4BP2L1-209ENST00000530622 1897 ntTSL 5 BASIC2.73□□□□□ -1.97
LINC01558Q9Y6Z2 NEPNP-201ENST00000404786 1371 ntBASIC2.73□□□□□ -1.97
LINC01558Q9Y6Z2 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC2.73□□□□□ -1.97
LINC01558Q9Y6Z2 AL359922.3-201ENST00000624779 1670 ntBASIC2.73□□□□□ -1.97
LINC01558Q9Y6Z2 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
LINC01558Q9Y6Z2 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
LINC01558Q9Y6Z2 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC2.72□□□□□ -1.97
LINC01558Q9Y6Z2 MAPK10-304ENST00000641341 3984 ntBASIC2.72□□□□□ -1.97
LINC01558Q9Y6Z2 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC2.72□□□□□ -1.97
LINC01558Q9Y6Z2 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
LINC01558Q9Y6Z2 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
LINC01558Q9Y6Z2 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC2.72□□□□□ -1.97
LINC01558Q9Y6Z2 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
LINC01558Q9Y6Z2 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
LINC01558Q9Y6Z2 AC103591.2-201ENST00000265259 766 ntBASIC2.72□□□□□ -1.97
LINC01558Q9Y6Z2 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
LINC01558Q9Y6Z2 TAC1-203ENST00000350485 975 ntTSL 5 BASIC2.72□□□□□ -1.97
LINC01558Q9Y6Z2 SPP1-202ENST00000360804 1196 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
LINC01558Q9Y6Z2 CRP-204ENST00000368112 787 ntTSL 2 BASIC2.72□□□□□ -1.97
LINC01558Q9Y6Z2 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC2.72□□□□□ -1.97
LINC01558Q9Y6Z2 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
LINC01558Q9Y6Z2 SNORA70-201ENST00000384436 135 ntBASIC2.72□□□□□ -1.97
LINC01558Q9Y6Z2 MIR130A-201ENST00000385274 89 ntBASIC2.72□□□□□ -1.97
LINC01558Q9Y6Z2 TRBV5-1-201ENST00000390381 652 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
LINC01558Q9Y6Z2 TRBV3-1-201ENST00000390387 391 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
LINC01558Q9Y6Z2 RAN-201ENST00000392367 780 ntTSL 5 BASIC2.72□□□□□ -1.97
LINC01558Q9Y6Z2 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
LINC01558Q9Y6Z2 AL034417.1-201ENST00000399343 800 ntBASIC2.72□□□□□ -1.97
LINC01558Q9Y6Z2 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC2.72□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 121.2 ms