Protein–RNA interactions for Protein: Q9Y2I6

NINL, Ninein-like protein, humanhuman

Predictions only

Length 1,382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NINLQ9Y2I6 DCC-202ENST00000412726 9525 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
NINLQ9Y2I6 EIF3EP2-201ENST00000423042 1814 ntBASIC7.75□□□□□ -1.17
NINLQ9Y2I6 PLCB1-202ENST00000378637 3864 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
NINLQ9Y2I6 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
NINLQ9Y2I6 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC7.75□□□□□ -1.17
NINLQ9Y2I6 AC022164.1-201ENST00000568767 2673 ntBASIC7.75□□□□□ -1.17
NINLQ9Y2I6 AC021876.1-201ENST00000425959 359 ntBASIC7.75□□□□□ -1.17
NINLQ9Y2I6 AC013733.1-201ENST00000449835 985 ntTSL 4 BASIC7.75□□□□□ -1.17
NINLQ9Y2I6 AP000547.1-201ENST00000454360 617 ntBASIC7.75□□□□□ -1.17
NINLQ9Y2I6 RANP1-206ENST00000455094 651 ntBASIC7.75□□□□□ -1.17
NINLQ9Y2I6 AC024558.1-201ENST00000505008 528 ntBASIC7.75□□□□□ -1.17
NINLQ9Y2I6 MGST2-204ENST00000506797 634 ntTSL 2 BASIC7.75□□□□□ -1.17
NINLQ9Y2I6 AP003306.1-201ENST00000529875 353 ntTSL 2 BASIC7.75□□□□□ -1.17
NINLQ9Y2I6 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC7.75□□□□□ -1.17
NINLQ9Y2I6 MIR4330-201ENST00000579077 105 ntBASIC7.75□□□□□ -1.17
NINLQ9Y2I6 AC245389.2-201ENST00000616023 576 ntBASIC7.75□□□□□ -1.17
NINLQ9Y2I6 AC242843.1-201ENST00000618702 573 ntBASIC7.75□□□□□ -1.17
NINLQ9Y2I6 MIR6837-201ENST00000620884 64 ntBASIC7.75□□□□□ -1.17
NINLQ9Y2I6 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
NINLQ9Y2I6 LINC00293-204ENST00000521715 1498 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
NINLQ9Y2I6 MED12L-206ENST00000474524 10744 ntAPPRIS P2 TSL 1 (best) BASIC7.75□□□□□ -1.17
NINLQ9Y2I6 AC093297.3-201ENST00000607056 2517 ntBASIC7.75□□□□□ -1.17
NINLQ9Y2I6 HIPK2-202ENST00000406875 15049 ntAPPRIS P4 TSL 1 (best) BASIC7.75□□□□□ -1.17
NINLQ9Y2I6 AL158152.1-201ENST00000602652 1435 ntBASIC7.75□□□□□ -1.17
NINLQ9Y2I6 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC7.75□□□□□ -1.17
NINLQ9Y2I6 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
NINLQ9Y2I6 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC7.75□□□□□ -1.17
NINLQ9Y2I6 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC7.75□□□□□ -1.17
NINLQ9Y2I6 RIMKLB-207ENST00000538135 5392 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
NINLQ9Y2I6 DCN-218ENST00000551354 2924 ntTSL 3 BASIC7.74□□□□□ -1.17
NINLQ9Y2I6 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC7.74□□□□□ -1.17
NINLQ9Y2I6 RN7SKP28-201ENST00000364770 305 ntBASIC7.74□□□□□ -1.17
NINLQ9Y2I6 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC7.74□□□□□ -1.17
NINLQ9Y2I6 RPL11P3-201ENST00000395256 523 ntBASIC7.74□□□□□ -1.17
NINLQ9Y2I6 DNAJA1P3-201ENST00000399417 1194 ntBASIC7.74□□□□□ -1.17
NINLQ9Y2I6 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC7.74□□□□□ -1.17
NINLQ9Y2I6 RNF10P1-201ENST00000418589 369 ntBASIC7.74□□□□□ -1.17
NINLQ9Y2I6 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC7.74□□□□□ -1.17
NINLQ9Y2I6 AC007537.2-201ENST00000472093 511 ntBASIC7.74□□□□□ -1.17
NINLQ9Y2I6 RPS7P6-201ENST00000485777 579 ntBASIC7.74□□□□□ -1.17
NINLQ9Y2I6 PDCL3P4-201ENST00000489621 720 ntBASIC7.74□□□□□ -1.17
NINLQ9Y2I6 RN7SL346P-201ENST00000491561 294 ntBASIC7.74□□□□□ -1.17
NINLQ9Y2I6 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC7.74□□□□□ -1.17
NINLQ9Y2I6 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC7.74□□□□□ -1.17
NINLQ9Y2I6 AC008575.1-201ENST00000520401 694 ntAPPRIS P1 TSL 3 BASIC7.74□□□□□ -1.17
NINLQ9Y2I6 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC7.74□□□□□ -1.17
NINLQ9Y2I6 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC7.74□□□□□ -1.17
NINLQ9Y2I6 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC7.74□□□□□ -1.17
NINLQ9Y2I6 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC7.74□□□□□ -1.17
NINLQ9Y2I6 AGGF1P7-201ENST00000562369 913 ntBASIC7.74□□□□□ -1.17
NINLQ9Y2I6 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC7.74□□□□□ -1.17
NINLQ9Y2I6 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC7.74□□□□□ -1.17
NINLQ9Y2I6 AL049840.6-202ENST00000603373 279 ntBASIC7.74□□□□□ -1.17
NINLQ9Y2I6 AL356580.1-201ENST00000604129 159 ntTSL 5 BASIC7.74□□□□□ -1.17
NINLQ9Y2I6 SUGT1P3-202ENST00000604259 383 ntBASIC7.74□□□□□ -1.17
NINLQ9Y2I6 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
NINLQ9Y2I6 ARHGEF9-229ENST00000637040 5001 ntTSL 5 BASIC7.74□□□□□ -1.17
NINLQ9Y2I6 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
NINLQ9Y2I6 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
NINLQ9Y2I6 RFX4-203ENST00000392842 3955 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
NINLQ9Y2I6 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC7.74□□□□□ -1.17
NINLQ9Y2I6 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC7.74□□□□□ -1.17
NINLQ9Y2I6 TEX41-210ENST00000451774 2098 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
NINLQ9Y2I6 CPS1-204ENST00000451903 4770 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
NINLQ9Y2I6 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC7.74□□□□□ -1.17
NINLQ9Y2I6 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC7.74□□□□□ -1.17
NINLQ9Y2I6 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC7.74□□□□□ -1.17
NINLQ9Y2I6 SCN2A-209ENST00000636071 8881 ntAPPRIS ALT1 TSL 5 BASIC7.74□□□□□ -1.17
NINLQ9Y2I6 SCN2A-214ENST00000636985 8856 ntTSL 5 BASIC7.74□□□□□ -1.17
NINLQ9Y2I6 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
NINLQ9Y2I6 TMEM200A-202ENST00000392429 5017 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
NINLQ9Y2I6 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC7.73□□□□□ -1.17
NINLQ9Y2I6 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC7.73□□□□□ -1.17
NINLQ9Y2I6 AL589647.1-201ENST00000402485 466 ntBASIC7.73□□□□□ -1.17
NINLQ9Y2I6 GABARAPL3-201ENST00000412799 354 ntBASIC7.73□□□□□ -1.17
NINLQ9Y2I6 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC7.73□□□□□ -1.17
NINLQ9Y2I6 AC092106.1-201ENST00000444291 373 ntBASIC7.73□□□□□ -1.17
NINLQ9Y2I6 snoU13.29-201ENST00000459370 104 ntBASIC7.73□□□□□ -1.17
NINLQ9Y2I6 PPP1R11P1-201ENST00000486095 376 ntBASIC7.73□□□□□ -1.17
NINLQ9Y2I6 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC7.73□□□□□ -1.17
NINLQ9Y2I6 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC7.73□□□□□ -1.17
NINLQ9Y2I6 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC7.73□□□□□ -1.17
NINLQ9Y2I6 AC103968.1-201ENST00000557841 573 ntBASIC7.73□□□□□ -1.17
NINLQ9Y2I6 AL513327.3-201ENST00000602618 469 ntBASIC7.73□□□□□ -1.17
NINLQ9Y2I6 AC010245.2-201ENST00000606908 1167 ntBASIC7.73□□□□□ -1.17
NINLQ9Y2I6 PACRG-210ENST00000611387 279 ntTSL 5 BASIC7.73□□□□□ -1.17
NINLQ9Y2I6 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC7.73□□□□□ -1.17
NINLQ9Y2I6 UGP2-232ENST00000640075 567 ntTSL 5 BASIC7.73□□□□□ -1.17
NINLQ9Y2I6 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC7.73□□□□□ -1.17
NINLQ9Y2I6 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC7.73□□□□□ -1.17
NINLQ9Y2I6 SRGAP1-207ENST00000631006 8406 ntTSL 5 BASIC7.73□□□□□ -1.17
NINLQ9Y2I6 BDNF-217ENST00000533131 3878 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
NINLQ9Y2I6 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC7.73□□□□□ -1.17
NINLQ9Y2I6 PIGN-220ENST00000638167 4195 ntTSL 5 BASIC7.73□□□□□ -1.17
NINLQ9Y2I6 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC7.73□□□□□ -1.17
NINLQ9Y2I6 CACNB4-229ENST00000636617 5757 ntTSL 5 BASIC7.73□□□□□ -1.17
NINLQ9Y2I6 DOCK9-208ENST00000448493 7887 ntAPPRIS ALT2 TSL 5 BASIC7.73□□□□□ -1.17
NINLQ9Y2I6 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
NINLQ9Y2I6 ALG11-202ENST00000521508 2558 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
NINLQ9Y2I6 EEF1A1P30-201ENST00000429708 1315 ntBASIC7.73□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 119.1 ms