Protein–RNA interactions for Protein: Q9UPQ4

TRIM35, Tripartite motif-containing protein 35, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35Q9UPQ4 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC9.94□□□□□ -0.82
TRIM35Q9UPQ4 RNU6-373P-201ENST00000411247 98 ntBASIC9.94□□□□□ -0.82
TRIM35Q9UPQ4 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC9.94□□□□□ -0.82
TRIM35Q9UPQ4 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC9.94□□□□□ -0.82
TRIM35Q9UPQ4 BX295541.1-201ENST00000417774 250 ntBASIC9.94□□□□□ -0.82
TRIM35Q9UPQ4 AC008267.5-201ENST00000424928 265 ntBASIC9.94□□□□□ -0.82
TRIM35Q9UPQ4 AL445669.1-201ENST00000426743 755 ntBASIC9.94□□□□□ -0.82
TRIM35Q9UPQ4 RPSAP62-201ENST00000432596 833 ntBASIC9.94□□□□□ -0.82
TRIM35Q9UPQ4 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC9.94□□□□□ -0.82
TRIM35Q9UPQ4 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC9.94□□□□□ -0.82
TRIM35Q9UPQ4 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC9.94□□□□□ -0.82
TRIM35Q9UPQ4 AC091685.2-201ENST00000454924 864 ntBASIC9.94□□□□□ -0.82
TRIM35Q9UPQ4 LINC00533-201ENST00000456103 537 ntTSL 3 BASIC9.94□□□□□ -0.82
TRIM35Q9UPQ4 RNU6-420P-201ENST00000458780 107 ntBASIC9.94□□□□□ -0.82
TRIM35Q9UPQ4 RPL7P39-201ENST00000481157 744 ntBASIC9.94□□□□□ -0.82
TRIM35Q9UPQ4 AC079594.1-201ENST00000489757 331 ntBASIC9.94□□□□□ -0.82
TRIM35Q9UPQ4 GAPDHP61-201ENST00000507324 1005 ntBASIC9.94□□□□□ -0.82
TRIM35Q9UPQ4 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC9.94□□□□□ -0.82
TRIM35Q9UPQ4 AC092336.1-201ENST00000510562 415 ntTSL 3 BASIC9.94□□□□□ -0.82
TRIM35Q9UPQ4 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC9.94□□□□□ -0.82
TRIM35Q9UPQ4 AC083973.1-201ENST00000523459 590 ntTSL 2 BASIC9.94□□□□□ -0.82
TRIM35Q9UPQ4 AC026979.2-201ENST00000523733 583 ntTSL 5 BASIC9.94□□□□□ -0.82
TRIM35Q9UPQ4 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC9.94□□□□□ -0.82
TRIM35Q9UPQ4 LINC01989-201ENST00000566930 1081 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
TRIM35Q9UPQ4 AC010761.6-201ENST00000587898 197 ntTSL 3 BASIC9.94□□□□□ -0.82
TRIM35Q9UPQ4 AC020914.6-201ENST00000594327 272 ntBASIC9.94□□□□□ -0.82
TRIM35Q9UPQ4 AC005518.2-201ENST00000603254 282 ntBASIC9.94□□□□□ -0.82
TRIM35Q9UPQ4 HNF4A-AS1-202ENST00000609152 413 ntTSL 3 BASIC9.94□□□□□ -0.82
TRIM35Q9UPQ4 AC104237.2-201ENST00000612456 443 ntBASIC9.94□□□□□ -0.82
TRIM35Q9UPQ4 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC9.94□□□□□ -0.82
TRIM35Q9UPQ4 AL391903.2-201ENST00000614532 247 ntBASIC9.94□□□□□ -0.82
TRIM35Q9UPQ4 AC244153.1-204ENST00000615582 401 ntTSL 2 BASIC9.94□□□□□ -0.82
TRIM35Q9UPQ4 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC9.94□□□□□ -0.82
TRIM35Q9UPQ4 AC022418.1-201ENST00000624118 445 ntBASIC9.94□□□□□ -0.82
TRIM35Q9UPQ4 AC073488.8-201ENST00000631952 757 ntBASIC9.94□□□□□ -0.82
TRIM35Q9UPQ4 PIAS1-201ENST00000249636 8115 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
TRIM35Q9UPQ4 CELF2-204ENST00000417956 8044 ntAPPRIS P3 TSL 1 (best) BASIC9.94□□□□□ -0.82
TRIM35Q9UPQ4 KIF23-203ENST00000395392 3357 ntAPPRIS ALT2 TSL 5 BASIC9.94□□□□□ -0.82
TRIM35Q9UPQ4 TCF4-246ENST00000570287 3163 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
TRIM35Q9UPQ4 RNF24-203ENST00000432261 3149 ntTSL 5 BASIC9.94□□□□□ -0.82
TRIM35Q9UPQ4 SLC8A1-201ENST00000332839 2922 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
TRIM35Q9UPQ4 LINC01204-203ENST00000609127 2900 ntTSL 2 BASIC9.94□□□□□ -0.82
TRIM35Q9UPQ4 B3GALT5-202ENST00000380618 2763 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
TRIM35Q9UPQ4 DCLRE1C-211ENST00000396817 2761 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
TRIM35Q9UPQ4 CSMD1-218ENST00000635120 11737 ntAPPRIS P2 TSL 5 BASIC9.94□□□□□ -0.82
TRIM35Q9UPQ4 KCTD6-201ENST00000355076 2425 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
TRIM35Q9UPQ4 RPL12P38-202ENST00000588627 2319 ntBASIC9.94□□□□□ -0.82
TRIM35Q9UPQ4 AL512662.1-201ENST00000624850 2251 ntBASIC9.94□□□□□ -0.82
TRIM35Q9UPQ4 RBM7-204ENST00000541475 6725 ntTSL 2 BASIC9.94□□□□□ -0.82
TRIM35Q9UPQ4 AL355103.1-201ENST00000557246 2226 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
TRIM35Q9UPQ4 FCGR3A-201ENST00000367967 2086 ntAPPRIS P1 TSL 3 BASIC9.94□□□□□ -0.82
TRIM35Q9UPQ4 CDKL5-202ENST00000379996 3449 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
TRIM35Q9UPQ4 PTBP2-203ENST00000426398 3027 ntAPPRIS P3 TSL 1 (best) BASIC9.93□□□□□ -0.82
TRIM35Q9UPQ4 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
TRIM35Q9UPQ4 TSC22D1-212ENST00000611198 2877 ntTSL 2 BASIC9.93□□□□□ -0.82
TRIM35Q9UPQ4 TSC22D1-213ENST00000622051 2872 ntTSL 2 BASIC9.93□□□□□ -0.82
TRIM35Q9UPQ4 SALL1P1-201ENST00000438101 3837 ntBASIC9.93□□□□□ -0.82
TRIM35Q9UPQ4 RUNX1T1-248ENST00000613302 7687 ntAPPRIS P3 TSL 5 BASIC9.93□□□□□ -0.82
TRIM35Q9UPQ4 AC026464.2-201ENST00000567834 2421 ntBASIC9.93□□□□□ -0.82
TRIM35Q9UPQ4 PTPRT-207ENST00000373201 12660 ntAPPRIS ALT2 TSL 5 BASIC9.93□□□□□ -0.82
TRIM35Q9UPQ4 Y_RNA.184-201ENST00000363884 108 ntBASIC9.93□□□□□ -0.82
TRIM35Q9UPQ4 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
TRIM35Q9UPQ4 NPPA-AS1-201ENST00000400892 936 ntTSL 3 BASIC9.93□□□□□ -0.82
TRIM35Q9UPQ4 AC127526.2-201ENST00000426436 775 ntBASIC9.93□□□□□ -0.82
TRIM35Q9UPQ4 RPL5P25-201ENST00000441148 775 ntBASIC9.93□□□□□ -0.82
TRIM35Q9UPQ4 AL831737.1-201ENST00000441288 271 ntBASIC9.93□□□□□ -0.82
TRIM35Q9UPQ4 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC9.93□□□□□ -0.82
TRIM35Q9UPQ4 AC007182.2-201ENST00000489251 402 ntBASIC9.93□□□□□ -0.82
TRIM35Q9UPQ4 RPL32P3-203ENST00000506593 498 ntTSL 5 BASIC9.93□□□□□ -0.82
TRIM35Q9UPQ4 AC025766.1-201ENST00000514061 409 ntTSL 5 BASIC9.93□□□□□ -0.82
TRIM35Q9UPQ4 KCNU1-202ENST00000518904 334 ntTSL 2 BASIC9.93□□□□□ -0.82
TRIM35Q9UPQ4 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC9.93□□□□□ -0.82
TRIM35Q9UPQ4 AC087276.1-201ENST00000529659 480 ntBASIC9.93□□□□□ -0.82
TRIM35Q9UPQ4 AC138123.2-204ENST00000547432 721 ntTSL 3 BASIC9.93□□□□□ -0.82
TRIM35Q9UPQ4 AC137768.1-201ENST00000549998 553 ntBASIC9.93□□□□□ -0.82
TRIM35Q9UPQ4 PCAT29-202ENST00000558941 545 ntTSL 4 BASIC9.93□□□□□ -0.82
TRIM35Q9UPQ4 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC9.93□□□□□ -0.82
TRIM35Q9UPQ4 AC007861.1-201ENST00000576671 674 ntTSL 5 BASIC9.93□□□□□ -0.82
TRIM35Q9UPQ4 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC9.93□□□□□ -0.82
TRIM35Q9UPQ4 ANKRD20A19P-203ENST00000602724 295 ntBASIC9.93□□□□□ -0.82
TRIM35Q9UPQ4 SUMO2P14-201ENST00000604488 293 ntBASIC9.93□□□□□ -0.82
TRIM35Q9UPQ4 TAS2R6P-201ENST00000605022 826 ntBASIC9.93□□□□□ -0.82
TRIM35Q9UPQ4 AL353898.2-201ENST00000623000 255 ntBASIC9.93□□□□□ -0.82
TRIM35Q9UPQ4 Z69720.2-201ENST00000624755 279 ntBASIC9.93□□□□□ -0.82
TRIM35Q9UPQ4 AC100810.6-201ENST00000638068 285 ntBASIC9.93□□□□□ -0.82
TRIM35Q9UPQ4 OR11G2-202ENST00000641682 3786 ntAPPRIS P1 BASIC9.93□□□□□ -0.82
TRIM35Q9UPQ4 GC-201ENST00000273951 1972 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
TRIM35Q9UPQ4 CDH8-203ENST00000577390 9721 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
TRIM35Q9UPQ4 ATP2B1-204ENST00000428670 7032 ntAPPRIS P1 TSL 5 BASIC9.93□□□□□ -0.82
TRIM35Q9UPQ4 CYP4A11-201ENST00000310638 2530 ntAPPRIS P2 TSL 1 (best) BASIC9.93□□□□□ -0.82
TRIM35Q9UPQ4 ZNF107-204ENST00000423627 5773 ntTSL 5 BASIC9.93□□□□□ -0.82
TRIM35Q9UPQ4 CACNB4-250ENST00000637418 2015 ntTSL 5 BASIC9.92□□□□□ -0.82
TRIM35Q9UPQ4 CCDC150-201ENST00000389175 3685 ntAPPRIS P2 TSL 5 BASIC9.92□□□□□ -0.82
TRIM35Q9UPQ4 TRIM59-208ENST00000543469 4615 ntTSL 5 BASIC9.92□□□□□ -0.82
TRIM35Q9UPQ4 PTK2-240ENST00000522684 4955 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
TRIM35Q9UPQ4 CCL13-201ENST00000225844 851 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
TRIM35Q9UPQ4 ORM1-201ENST00000259396 802 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
TRIM35Q9UPQ4 RNU6-697P-201ENST00000363348 107 ntBASIC9.92□□□□□ -0.82
TRIM35Q9UPQ4 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC9.92□□□□□ -0.82
TRIM35Q9UPQ4 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC9.92□□□□□ -0.82
Retrieved 100 of 98,524 protein–RNA pairs in 70.5 ms