Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 RPS17P11-201ENST00000474297 293 ntBASIC6.84□□□□□ -1.31
VTA1Q9NP79 EFCAB10-203ENST00000480514 740 ntAPPRIS ALT1 TSL 1 (best) BASIC6.84□□□□□ -1.31
VTA1Q9NP79 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC6.84□□□□□ -1.31
VTA1Q9NP79 AC083795.1-201ENST00000491760 320 ntBASIC6.84□□□□□ -1.31
VTA1Q9NP79 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC6.84□□□□□ -1.31
VTA1Q9NP79 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC6.84□□□□□ -1.31
VTA1Q9NP79 AC111000.6-201ENST00000514471 709 ntBASIC6.84□□□□□ -1.31
VTA1Q9NP79 AC097537.1-201ENST00000514864 1213 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
VTA1Q9NP79 AC026407.1-201ENST00000518369 204 ntBASIC6.84□□□□□ -1.31
VTA1Q9NP79 AZIN1-AS1-208ENST00000519257 619 ntTSL 3 BASIC6.84□□□□□ -1.31
VTA1Q9NP79 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC6.84□□□□□ -1.31
VTA1Q9NP79 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC6.84□□□□□ -1.31
VTA1Q9NP79 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC6.84□□□□□ -1.31
VTA1Q9NP79 GNG2-208ENST00000554875 430 ntTSL 5 BASIC6.84□□□□□ -1.31
VTA1Q9NP79 AL356801.1-201ENST00000559320 294 ntBASIC6.84□□□□□ -1.31
VTA1Q9NP79 AC021483.2-201ENST00000567415 758 ntBASIC6.84□□□□□ -1.31
VTA1Q9NP79 AC007448.1-201ENST00000582714 234 ntBASIC6.84□□□□□ -1.31
VTA1Q9NP79 BMS1P7-201ENST00000602440 1052 ntBASIC6.84□□□□□ -1.31
VTA1Q9NP79 RNA5SP440-201ENST00000612665 119 ntBASIC6.84□□□□□ -1.31
VTA1Q9NP79 Metazoa_SRP.170-201ENST00000616060 254 ntBASIC6.84□□□□□ -1.31
VTA1Q9NP79 AL669942.2-201ENST00000620352 697 ntBASIC6.84□□□□□ -1.31
VTA1Q9NP79 OR5D13-201ENST00000623930 945 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
VTA1Q9NP79 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC6.84□□□□□ -1.31
VTA1Q9NP79 LINC01708-202ENST00000634316 859 ntTSL 5 BASIC6.84□□□□□ -1.31
VTA1Q9NP79 MYPN-202ENST00000358913 6013 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
VTA1Q9NP79 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
VTA1Q9NP79 MKL2-202ENST00000571589 8799 ntAPPRIS ALT2 TSL 2 BASIC6.84□□□□□ -1.31
VTA1Q9NP79 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC6.84□□□□□ -1.31
VTA1Q9NP79 AC112243.1-201ENST00000623949 3851 ntBASIC6.84□□□□□ -1.31
VTA1Q9NP79 AC078880.4-201ENST00000617627 1749 ntBASIC6.84□□□□□ -1.31
VTA1Q9NP79 KIAA0232-201ENST00000307659 7841 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
VTA1Q9NP79 CPEB4-202ENST00000334035 6705 ntTSL 1 (best) BASIC6.84□□□□□ -1.32
VTA1Q9NP79 LINC01415-201ENST00000587320 4071 ntTSL 2 BASIC6.84□□□□□ -1.32
VTA1Q9NP79 MCM10-201ENST00000378694 4587 ntTSL 5 BASIC6.84□□□□□ -1.32
VTA1Q9NP79 AC005674.2-201ENST00000561486 3510 ntTSL 1 (best) BASIC6.84□□□□□ -1.32
VTA1Q9NP79 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC6.84□□□□□ -1.32
VTA1Q9NP79 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC6.84□□□□□ -1.32
VTA1Q9NP79 TRAF5-201ENST00000261464 3972 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.32
VTA1Q9NP79 VPS39-202ENST00000348544 2661 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
VTA1Q9NP79 CACNA1E-202ENST00000358338 14700 ntAPPRIS ALT2 TSL 5 BASIC6.83□□□□□ -1.32
VTA1Q9NP79 NEPNP-201ENST00000404786 1371 ntBASIC6.83□□□□□ -1.32
VTA1Q9NP79 HDAC1P2-201ENST00000453661 1398 ntBASIC6.83□□□□□ -1.32
VTA1Q9NP79 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC6.83□□□□□ -1.32
VTA1Q9NP79 UGT2B27P-201ENST00000505092 1620 ntBASIC6.83□□□□□ -1.32
VTA1Q9NP79 NALCN-201ENST00000251127 6818 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
VTA1Q9NP79 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
VTA1Q9NP79 MYPN-204ENST00000540630 5707 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
VTA1Q9NP79 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC6.83□□□□□ -1.32
VTA1Q9NP79 BICRAL-202ENST00000394168 6515 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
VTA1Q9NP79 ATF7IP-201ENST00000261168 8878 ntAPPRIS P3 TSL 5 BASIC6.83□□□□□ -1.32
VTA1Q9NP79 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC6.83□□□□□ -1.32
VTA1Q9NP79 MRE11-204ENST00000407439 2684 ntTSL 2 BASIC6.83□□□□□ -1.32
VTA1Q9NP79 MTHFD2P5-201ENST00000320415 844 ntBASIC6.83□□□□□ -1.32
VTA1Q9NP79 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
VTA1Q9NP79 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
VTA1Q9NP79 RNA5SP375-201ENST00000362975 119 ntBASIC6.83□□□□□ -1.32
VTA1Q9NP79 NPM1P38-201ENST00000403835 865 ntBASIC6.83□□□□□ -1.32
VTA1Q9NP79 AL355615.1-201ENST00000406187 641 ntBASIC6.83□□□□□ -1.32
VTA1Q9NP79 UBE2V1P9-201ENST00000414760 368 ntBASIC6.83□□□□□ -1.32
VTA1Q9NP79 BX664727.1-201ENST00000416024 466 ntBASIC6.83□□□□□ -1.32
VTA1Q9NP79 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC6.83□□□□□ -1.32
VTA1Q9NP79 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC6.83□□□□□ -1.32
VTA1Q9NP79 AC009237.1-201ENST00000442127 744 ntBASIC6.83□□□□□ -1.32
VTA1Q9NP79 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC6.83□□□□□ -1.32
VTA1Q9NP79 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC6.83□□□□□ -1.32
VTA1Q9NP79 DNAJC19P5-201ENST00000443295 316 ntBASIC6.83□□□□□ -1.32
VTA1Q9NP79 BMS1P10-201ENST00000443754 1120 ntBASIC6.83□□□□□ -1.32
VTA1Q9NP79 OR13K1P-201ENST00000444577 975 ntBASIC6.83□□□□□ -1.32
VTA1Q9NP79 RPL36AP39-201ENST00000445859 318 ntBASIC6.83□□□□□ -1.32
VTA1Q9NP79 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC6.83□□□□□ -1.32
VTA1Q9NP79 AC104982.1-201ENST00000478775 574 ntBASIC6.83□□□□□ -1.32
VTA1Q9NP79 SYT14P1-201ENST00000481459 721 ntBASIC6.83□□□□□ -1.32
VTA1Q9NP79 AC124945.1-201ENST00000485133 188 ntBASIC6.83□□□□□ -1.32
VTA1Q9NP79 AC109439.2-201ENST00000502421 564 ntTSL 4 BASIC6.83□□□□□ -1.32
VTA1Q9NP79 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC6.83□□□□□ -1.32
VTA1Q9NP79 AC010476.1-201ENST00000519111 851 ntBASIC6.83□□□□□ -1.32
VTA1Q9NP79 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC6.83□□□□□ -1.32
VTA1Q9NP79 BUD31P1-201ENST00000521828 359 ntBASIC6.83□□□□□ -1.32
VTA1Q9NP79 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC6.83□□□□□ -1.32
VTA1Q9NP79 GLRXP2-201ENST00000555594 321 ntBASIC6.83□□□□□ -1.32
VTA1Q9NP79 AC091078.2-201ENST00000557145 559 ntBASIC6.83□□□□□ -1.32
VTA1Q9NP79 AC099850.2-201ENST00000577660 557 ntAPPRIS P1 TSL 3 BASIC6.83□□□□□ -1.32
VTA1Q9NP79 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
VTA1Q9NP79 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
VTA1Q9NP79 AC026741.1-201ENST00000605892 482 ntBASIC6.83□□□□□ -1.32
VTA1Q9NP79 AC124016.2-201ENST00000610058 665 ntBASIC6.83□□□□□ -1.32
VTA1Q9NP79 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC6.83□□□□□ -1.32
VTA1Q9NP79 TMTC3-201ENST00000266712 7203 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
VTA1Q9NP79 PHEX-AS1-201ENST00000424650 1906 ntTSL 2 BASIC6.83□□□□□ -1.32
VTA1Q9NP79 NAT1-209ENST00000541942 1948 ntAPPRIS P1 TSL 3 BASIC6.83□□□□□ -1.32
VTA1Q9NP79 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
VTA1Q9NP79 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
VTA1Q9NP79 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC6.83□□□□□ -1.32
VTA1Q9NP79 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC6.83□□□□□ -1.32
VTA1Q9NP79 GPR65-201ENST00000267549 4522 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
VTA1Q9NP79 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC6.83□□□□□ -1.32
VTA1Q9NP79 PUM2-201ENST00000319801 6002 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
VTA1Q9NP79 CEACAM1-203ENST00000352591 3170 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
VTA1Q9NP79 ZNF532-214ENST00000589288 5585 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
VTA1Q9NP79 HSPD1P14-201ENST00000432666 1618 ntBASIC6.83□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 108.6 ms