Protein–RNA interactions for Protein: Q9NP66

HMG20A, High mobility group protein 20A, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20AQ9NP66 AL389925.1-201ENST00000432257 728 ntBASIC5.04□□□□□ -1.6
HMG20AQ9NP66 TRGC2-201ENST00000436911 1013 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
HMG20AQ9NP66 PPIAP7-201ENST00000454070 489 ntBASIC5.04□□□□□ -1.6
HMG20AQ9NP66 ATP5LP5-201ENST00000483050 299 ntBASIC5.04□□□□□ -1.6
HMG20AQ9NP66 AC090638.1-201ENST00000498296 909 ntBASIC5.04□□□□□ -1.6
HMG20AQ9NP66 AC113367.2-201ENST00000505749 160 ntBASIC5.04□□□□□ -1.6
HMG20AQ9NP66 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC5.04□□□□□ -1.6
HMG20AQ9NP66 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC5.04□□□□□ -1.6
HMG20AQ9NP66 RNA5SP441-201ENST00000516809 88 ntBASIC5.04□□□□□ -1.6
HMG20AQ9NP66 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC5.04□□□□□ -1.6
HMG20AQ9NP66 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC5.04□□□□□ -1.6
HMG20AQ9NP66 AC116917.1-201ENST00000520558 305 ntBASIC5.04□□□□□ -1.6
HMG20AQ9NP66 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
HMG20AQ9NP66 AP000620.1-201ENST00000527147 504 ntBASIC5.04□□□□□ -1.6
HMG20AQ9NP66 C3orf14-207ENST00000542214 768 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
HMG20AQ9NP66 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC5.04□□□□□ -1.6
HMG20AQ9NP66 CNEP1R1-204ENST00000562576 656 ntTSL 5 BASIC5.04□□□□□ -1.6
HMG20AQ9NP66 PWRN1-207ENST00000565893 818 ntTSL 3 BASIC5.04□□□□□ -1.6
HMG20AQ9NP66 AC004232.2-201ENST00000574245 821 ntBASIC5.04□□□□□ -1.6
HMG20AQ9NP66 LINC01533-204ENST00000590719 435 ntTSL 5 BASIC5.04□□□□□ -1.6
HMG20AQ9NP66 AC012370.2-201ENST00000597541 1080 ntTSL 5 BASIC5.04□□□□□ -1.6
HMG20AQ9NP66 AC091769.2-201ENST00000605385 479 ntTSL 4 BASIC5.04□□□□□ -1.6
HMG20AQ9NP66 AC092681.3-201ENST00000609463 678 ntBASIC5.04□□□□□ -1.6
HMG20AQ9NP66 PACRG-210ENST00000611387 279 ntTSL 5 BASIC5.04□□□□□ -1.6
HMG20AQ9NP66 AC015574.1-202ENST00000616588 456 ntTSL 5 BASIC5.04□□□□□ -1.6
HMG20AQ9NP66 AJ239318.1-201ENST00000624445 607 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
HMG20AQ9NP66 AL357140.4-201ENST00000636827 412 ntBASIC5.04□□□□□ -1.6
HMG20AQ9NP66 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
HMG20AQ9NP66 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
HMG20AQ9NP66 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC5.04□□□□□ -1.6
HMG20AQ9NP66 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
HMG20AQ9NP66 MS4A3-201ENST00000278865 1613 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
HMG20AQ9NP66 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC5.04□□□□□ -1.6
HMG20AQ9NP66 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
HMG20AQ9NP66 AL672167.1-204ENST00000641875 3017 ntBASIC5.04□□□□□ -1.6
HMG20AQ9NP66 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC5.04□□□□□ -1.6
HMG20AQ9NP66 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
HMG20AQ9NP66 GNL2P1-201ENST00000451274 2190 ntBASIC5.04□□□□□ -1.6
HMG20AQ9NP66 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
HMG20AQ9NP66 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
HMG20AQ9NP66 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
HMG20AQ9NP66 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
HMG20AQ9NP66 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC5.03□□□□□ -1.6
HMG20AQ9NP66 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
HMG20AQ9NP66 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
HMG20AQ9NP66 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC5.03□□□□□ -1.6
HMG20AQ9NP66 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
HMG20AQ9NP66 CRYBA1-201ENST00000225387 783 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
HMG20AQ9NP66 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
HMG20AQ9NP66 TMEM31-201ENST00000319560 728 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
HMG20AQ9NP66 TRIM69-202ENST00000338264 1222 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
HMG20AQ9NP66 GAS5-202ENST00000414075 413 ntTSL 2 BASIC5.03□□□□□ -1.6
HMG20AQ9NP66 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC5.03□□□□□ -1.6
HMG20AQ9NP66 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC5.03□□□□□ -1.6
HMG20AQ9NP66 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC5.03□□□□□ -1.6
HMG20AQ9NP66 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC5.03□□□□□ -1.6
HMG20AQ9NP66 AC024601.1-201ENST00000427247 524 ntTSL 3 BASIC5.03□□□□□ -1.6
HMG20AQ9NP66 RPL19P16-201ENST00000433839 588 ntBASIC5.03□□□□□ -1.6
HMG20AQ9NP66 AL138921.1-201ENST00000444359 846 ntTSL 5 BASIC5.03□□□□□ -1.6
HMG20AQ9NP66 RN7SL254P-201ENST00000460609 284 ntBASIC5.03□□□□□ -1.6
HMG20AQ9NP66 AL591473.1-201ENST00000464297 313 ntBASIC5.03□□□□□ -1.6
HMG20AQ9NP66 RN7SL612P-201ENST00000497704 295 ntBASIC5.03□□□□□ -1.6
HMG20AQ9NP66 AC104779.1-201ENST00000503557 441 ntTSL 3 BASIC5.03□□□□□ -1.6
HMG20AQ9NP66 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC5.03□□□□□ -1.6
HMG20AQ9NP66 AC100784.1-201ENST00000522790 310 ntBASIC5.03□□□□□ -1.6
HMG20AQ9NP66 BTG1P1-201ENST00000540396 508 ntBASIC5.03□□□□□ -1.6
HMG20AQ9NP66 AL390334.1-201ENST00000556395 450 ntBASIC5.03□□□□□ -1.6
HMG20AQ9NP66 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC5.03□□□□□ -1.6
HMG20AQ9NP66 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC5.03□□□□□ -1.6
HMG20AQ9NP66 AC007346.1-201ENST00000569208 867 ntBASIC5.03□□□□□ -1.6
HMG20AQ9NP66 AC010401.2-202ENST00000570663 396 ntTSL 2 BASIC5.03□□□□□ -1.6
HMG20AQ9NP66 AC005544.1-201ENST00000584277 460 ntTSL 3 BASIC5.03□□□□□ -1.6
HMG20AQ9NP66 AC011500.1-201ENST00000601963 469 ntBASIC5.03□□□□□ -1.6
HMG20AQ9NP66 AC073333.2-201ENST00000603589 769 ntBASIC5.03□□□□□ -1.6
HMG20AQ9NP66 uc_338.29-201ENST00000615099 168 ntBASIC5.03□□□□□ -1.6
HMG20AQ9NP66 AL589935.2-201ENST00000616471 1231 ntBASIC5.03□□□□□ -1.6
HMG20AQ9NP66 HTR1DP1-201ENST00000616500 888 ntBASIC5.03□□□□□ -1.6
HMG20AQ9NP66 FAM27E2-201ENST00000619668 403 ntBASIC5.03□□□□□ -1.6
HMG20AQ9NP66 AC022106.2-201ENST00000620114 757 ntBASIC5.03□□□□□ -1.6
HMG20AQ9NP66 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
HMG20AQ9NP66 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC5.03□□□□□ -1.6
HMG20AQ9NP66 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC5.03□□□□□ -1.6
HMG20AQ9NP66 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
HMG20AQ9NP66 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
HMG20AQ9NP66 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC5.03□□□□□ -1.6
HMG20AQ9NP66 SAMD3-205ENST00000457563 1877 ntTSL 2 BASIC5.03□□□□□ -1.6
HMG20AQ9NP66 PSG10P-201ENST00000501199 1500 ntBASIC5.02□□□□□ -1.61
HMG20AQ9NP66 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
HMG20AQ9NP66 AC083843.3-201ENST00000623679 2186 ntBASIC5.02□□□□□ -1.61
HMG20AQ9NP66 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC5.02□□□□□ -1.61
HMG20AQ9NP66 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
HMG20AQ9NP66 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC5.02□□□□□ -1.61
HMG20AQ9NP66 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
HMG20AQ9NP66 CTAGE5-201ENST00000280082 2554 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
HMG20AQ9NP66 TERB2-201ENST00000340827 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
HMG20AQ9NP66 RN7SKP250-201ENST00000363924 321 ntBASIC5.02□□□□□ -1.61
HMG20AQ9NP66 IFNB1-201ENST00000380232 859 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
HMG20AQ9NP66 AC005042.1-201ENST00000393397 800 ntBASIC5.02□□□□□ -1.61
HMG20AQ9NP66 SNRPEP6-201ENST00000407465 277 ntBASIC5.02□□□□□ -1.61
HMG20AQ9NP66 AC007738.1-201ENST00000413892 348 ntBASIC5.02□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 83.4 ms