Protein–RNA interactions for Protein: Q9H4W6

EBF3, Transcription factor COE3, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3Q9H4W6 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
EBF3Q9H4W6 HECW2-201ENST00000260983 11809 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
EBF3Q9H4W6 OPRM1-217ENST00000522236 2459 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
EBF3Q9H4W6 AC093671.1-201ENST00000624981 2929 ntBASIC6.06□□□□□ -1.44
EBF3Q9H4W6 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC6.06□□□□□ -1.44
EBF3Q9H4W6 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
EBF3Q9H4W6 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC6.06□□□□□ -1.44
EBF3Q9H4W6 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
EBF3Q9H4W6 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC6.06□□□□□ -1.44
EBF3Q9H4W6 RNA5SP132-201ENST00000364725 118 ntBASIC6.06□□□□□ -1.44
EBF3Q9H4W6 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC6.06□□□□□ -1.44
EBF3Q9H4W6 ZSCAN12P1-201ENST00000406489 419 ntBASIC6.06□□□□□ -1.44
EBF3Q9H4W6 RNU2-72P-201ENST00000411175 163 ntBASIC6.06□□□□□ -1.44
EBF3Q9H4W6 PSMA3-202ENST00000412908 908 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
EBF3Q9H4W6 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC6.06□□□□□ -1.44
EBF3Q9H4W6 OR51A6P-201ENST00000418680 1004 ntBASIC6.06□□□□□ -1.44
EBF3Q9H4W6 OSBPL10-AS1-202ENST00000418728 458 ntTSL 5 BASIC6.06□□□□□ -1.44
EBF3Q9H4W6 AC015977.1-201ENST00000418887 292 ntBASIC6.06□□□□□ -1.44
EBF3Q9H4W6 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC6.06□□□□□ -1.44
EBF3Q9H4W6 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC6.06□□□□□ -1.44
EBF3Q9H4W6 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC6.06□□□□□ -1.44
EBF3Q9H4W6 BX119904.3-201ENST00000428194 957 ntBASIC6.06□□□□□ -1.44
EBF3Q9H4W6 HCG14-201ENST00000444986 413 ntTSL 2 BASIC6.06□□□□□ -1.44
EBF3Q9H4W6 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
EBF3Q9H4W6 AL513343.1-201ENST00000451818 792 ntBASIC6.06□□□□□ -1.44
EBF3Q9H4W6 RPL23AP40-201ENST00000487630 390 ntBASIC6.06□□□□□ -1.44
EBF3Q9H4W6 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
EBF3Q9H4W6 AC008638.1-201ENST00000506035 866 ntBASIC6.06□□□□□ -1.44
EBF3Q9H4W6 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC6.06□□□□□ -1.44
EBF3Q9H4W6 AC025857.1-201ENST00000525252 377 ntBASIC6.06□□□□□ -1.44
EBF3Q9H4W6 C16orf52-205ENST00000567004 951 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
EBF3Q9H4W6 AC016180.1-201ENST00000567945 403 ntBASIC6.06□□□□□ -1.44
EBF3Q9H4W6 GARSP1-201ENST00000570895 719 ntBASIC6.06□□□□□ -1.44
EBF3Q9H4W6 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
EBF3Q9H4W6 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC6.06□□□□□ -1.44
EBF3Q9H4W6 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC6.06□□□□□ -1.44
EBF3Q9H4W6 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC6.06□□□□□ -1.44
EBF3Q9H4W6 OR7A8P-201ENST00000595427 913 ntBASIC6.06□□□□□ -1.44
EBF3Q9H4W6 HCG18-243ENST00000602498 327 ntTSL 3 BASIC6.06□□□□□ -1.44
EBF3Q9H4W6 AC119501.1-201ENST00000603646 475 ntBASIC6.06□□□□□ -1.44
EBF3Q9H4W6 AC145423.1-201ENST00000605712 336 ntBASIC6.06□□□□□ -1.44
EBF3Q9H4W6 MKKS-203ENST00000609375 882 ntTSL 2 BASIC6.06□□□□□ -1.44
EBF3Q9H4W6 AC110792.4-201ENST00000609843 298 ntBASIC6.06□□□□□ -1.44
EBF3Q9H4W6 AL139099.4-201ENST00000614802 114 ntBASIC6.06□□□□□ -1.44
EBF3Q9H4W6 AC005154.1-203ENST00000626245 451 ntTSL 5 BASIC6.06□□□□□ -1.44
EBF3Q9H4W6 AL596218.1-201ENST00000634239 1140 ntTSL 5 BASIC6.06□□□□□ -1.44
EBF3Q9H4W6 AL163152.1-201ENST00000642001 374 ntBASIC6.06□□□□□ -1.44
EBF3Q9H4W6 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
EBF3Q9H4W6 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
EBF3Q9H4W6 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
EBF3Q9H4W6 MAGI2-222ENST00000636039 5671 ntTSL 5 BASIC6.06□□□□□ -1.44
EBF3Q9H4W6 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
EBF3Q9H4W6 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC6.06□□□□□ -1.44
EBF3Q9H4W6 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
EBF3Q9H4W6 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
EBF3Q9H4W6 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC6.05□□□□□ -1.44
EBF3Q9H4W6 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC6.05□□□□□ -1.44
EBF3Q9H4W6 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
EBF3Q9H4W6 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
EBF3Q9H4W6 AC027279.4-201ENST00000624371 2072 ntBASIC6.05□□□□□ -1.44
EBF3Q9H4W6 Z83820.1-201ENST00000456978 1499 ntBASIC6.05□□□□□ -1.44
EBF3Q9H4W6 C1orf162-201ENST00000343534 1107 ntAPPRIS P3 TSL 1 (best) BASIC6.05□□□□□ -1.44
EBF3Q9H4W6 MTND4P11-201ENST00000417020 1058 ntBASIC6.05□□□□□ -1.44
EBF3Q9H4W6 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC6.05□□□□□ -1.44
EBF3Q9H4W6 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC6.05□□□□□ -1.44
EBF3Q9H4W6 AL356806.1-201ENST00000422524 916 ntBASIC6.05□□□□□ -1.44
EBF3Q9H4W6 Z84478.1-201ENST00000438230 1219 ntBASIC6.05□□□□□ -1.44
EBF3Q9H4W6 AL136455.1-201ENST00000441083 1240 ntBASIC6.05□□□□□ -1.44
EBF3Q9H4W6 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC6.05□□□□□ -1.44
EBF3Q9H4W6 EIF4A1P6-201ENST00000448133 1210 ntBASIC6.05□□□□□ -1.44
EBF3Q9H4W6 AL353718.1-201ENST00000451028 517 ntBASIC6.05□□□□□ -1.44
EBF3Q9H4W6 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC6.05□□□□□ -1.44
EBF3Q9H4W6 CYCSP53-201ENST00000455540 265 ntBASIC6.05□□□□□ -1.44
EBF3Q9H4W6 MTND6P32-201ENST00000457611 483 ntBASIC6.05□□□□□ -1.44
EBF3Q9H4W6 AC022215.1-201ENST00000481770 362 ntBASIC6.05□□□□□ -1.44
EBF3Q9H4W6 AGGF1P3-201ENST00000493675 1213 ntBASIC6.05□□□□□ -1.44
EBF3Q9H4W6 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC6.05□□□□□ -1.44
EBF3Q9H4W6 DUTP7-201ENST00000507982 486 ntBASIC6.05□□□□□ -1.44
EBF3Q9H4W6 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC6.05□□□□□ -1.44
EBF3Q9H4W6 IGKV2-18-201ENST00000522607 343 ntBASIC6.05□□□□□ -1.44
EBF3Q9H4W6 AC136777.2-201ENST00000522979 358 ntBASIC6.05□□□□□ -1.44
EBF3Q9H4W6 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC6.05□□□□□ -1.44
EBF3Q9H4W6 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC6.05□□□□□ -1.44
EBF3Q9H4W6 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC6.05□□□□□ -1.44
EBF3Q9H4W6 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC6.05□□□□□ -1.44
EBF3Q9H4W6 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC6.05□□□□□ -1.44
EBF3Q9H4W6 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC6.05□□□□□ -1.44
EBF3Q9H4W6 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC6.05□□□□□ -1.44
EBF3Q9H4W6 BNIP3P40-201ENST00000596017 556 ntBASIC6.05□□□□□ -1.44
EBF3Q9H4W6 AC015849.6-201ENST00000605454 474 ntBASIC6.05□□□□□ -1.44
EBF3Q9H4W6 AC079395.2-201ENST00000610982 737 ntBASIC6.05□□□□□ -1.44
EBF3Q9H4W6 Xist_exon4.1-201ENST00000615964 126 ntBASIC6.05□□□□□ -1.44
EBF3Q9H4W6 AL445670.1-201ENST00000618889 801 ntBASIC6.05□□□□□ -1.44
EBF3Q9H4W6 METTL15-211ENST00000634762 718 ntTSL 5 BASIC6.05□□□□□ -1.44
EBF3Q9H4W6 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC6.05□□□□□ -1.44
EBF3Q9H4W6 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC6.05□□□□□ -1.44
EBF3Q9H4W6 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
EBF3Q9H4W6 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
EBF3Q9H4W6 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
EBF3Q9H4W6 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC6.05□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 85.1 ms