Protein–RNA interactions for Protein: Q9BUN5

CCDC28B, Coiled-coil domain-containing protein 28B, humanhuman

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28BQ9BUN5 RN7SL290P-201ENST00000578661 300 ntBASIC5.45□□□□□ -1.54
CCDC28BQ9BUN5 H3F3BP2-201ENST00000583907 357 ntBASIC5.45□□□□□ -1.54
CCDC28BQ9BUN5 TEX41-218ENST00000596540 882 ntTSL 5 BASIC5.45□□□□□ -1.54
CCDC28BQ9BUN5 AC079791.1-201ENST00000605356 973 ntBASIC5.45□□□□□ -1.54
CCDC28BQ9BUN5 AC012676.3-201ENST00000614983 479 ntBASIC5.45□□□□□ -1.54
CCDC28BQ9BUN5 uc_338.7-201ENST00000621834 124 ntBASIC5.45□□□□□ -1.54
CCDC28BQ9BUN5 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC5.45□□□□□ -1.54
CCDC28BQ9BUN5 LINC00615-201ENST00000546725 1406 ntTSL 2 BASIC5.45□□□□□ -1.54
CCDC28BQ9BUN5 AL731532.2-201ENST00000623542 1953 ntBASIC5.45□□□□□ -1.54
CCDC28BQ9BUN5 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC5.45□□□□□ -1.54
CCDC28BQ9BUN5 NADK2-201ENST00000282512 2507 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
CCDC28BQ9BUN5 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
CCDC28BQ9BUN5 CLHC1-204ENST00000407122 2139 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
CCDC28BQ9BUN5 AC007342.5-201ENST00000571340 2142 ntBASIC5.45□□□□□ -1.54
CCDC28BQ9BUN5 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
CCDC28BQ9BUN5 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
CCDC28BQ9BUN5 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
CCDC28BQ9BUN5 TRIM51GP-201ENST00000534741 1350 ntBASIC5.44□□□□□ -1.54
CCDC28BQ9BUN5 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
CCDC28BQ9BUN5 CROT-204ENST00000442291 1993 ntTSL 5 BASIC5.44□□□□□ -1.54
CCDC28BQ9BUN5 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
CCDC28BQ9BUN5 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC5.44□□□□□ -1.54
CCDC28BQ9BUN5 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
CCDC28BQ9BUN5 LINC01699-201ENST00000319701 259 ntTSL 2 BASIC5.44□□□□□ -1.54
CCDC28BQ9BUN5 TRGV3-201ENST00000390346 537 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
CCDC28BQ9BUN5 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
CCDC28BQ9BUN5 CCL7-202ENST00000394627 696 ntTSL 3 BASIC5.44□□□□□ -1.54
CCDC28BQ9BUN5 AL445465.1-208ENST00000419709 506 ntTSL 3 BASIC5.44□□□□□ -1.54
CCDC28BQ9BUN5 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC5.44□□□□□ -1.54
CCDC28BQ9BUN5 AC012519.1-201ENST00000424588 610 ntBASIC5.44□□□□□ -1.54
CCDC28BQ9BUN5 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC5.44□□□□□ -1.54
CCDC28BQ9BUN5 RPL7P56-201ENST00000429441 717 ntBASIC5.44□□□□□ -1.54
CCDC28BQ9BUN5 LINC00383-201ENST00000433664 817 ntTSL 3 BASIC5.44□□□□□ -1.54
CCDC28BQ9BUN5 AC096639.1-201ENST00000456240 347 ntTSL 5 BASIC5.44□□□□□ -1.54
CCDC28BQ9BUN5 AP000797.2-201ENST00000475768 606 ntBASIC5.44□□□□□ -1.54
CCDC28BQ9BUN5 CSNK1A1P3-201ENST00000504105 330 ntBASIC5.44□□□□□ -1.54
CCDC28BQ9BUN5 PRMT5P1-201ENST00000514351 598 ntBASIC5.44□□□□□ -1.54
CCDC28BQ9BUN5 AC138517.1-201ENST00000515724 568 ntBASIC5.44□□□□□ -1.54
CCDC28BQ9BUN5 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC5.44□□□□□ -1.54
CCDC28BQ9BUN5 C11orf54-206ENST00000528099 1862 ntAPPRIS P1 TSL 2 BASIC5.44□□□□□ -1.54
CCDC28BQ9BUN5 AC016993.1-201ENST00000547033 1258 ntTSL 3 BASIC5.44□□□□□ -1.54
CCDC28BQ9BUN5 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC5.44□□□□□ -1.54
CCDC28BQ9BUN5 AC073941.1-201ENST00000559148 539 ntTSL 4 BASIC5.44□□□□□ -1.54
CCDC28BQ9BUN5 AC211486.2-201ENST00000576046 280 ntTSL 3 BASIC5.44□□□□□ -1.54
CCDC28BQ9BUN5 MTCYBP13-201ENST00000578634 1093 ntBASIC5.44□□□□□ -1.54
CCDC28BQ9BUN5 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC5.44□□□□□ -1.54
CCDC28BQ9BUN5 RN7SL435P-201ENST00000584418 282 ntBASIC5.44□□□□□ -1.54
CCDC28BQ9BUN5 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC5.44□□□□□ -1.54
CCDC28BQ9BUN5 LINC01435-220ENST00000630847 714 ntTSL 5 BASIC5.44□□□□□ -1.54
CCDC28BQ9BUN5 AL357140.4-201ENST00000636827 412 ntBASIC5.44□□□□□ -1.54
CCDC28BQ9BUN5 AC134980.1-214ENST00000638815 687 ntTSL 5 BASIC5.44□□□□□ -1.54
CCDC28BQ9BUN5 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
CCDC28BQ9BUN5 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
CCDC28BQ9BUN5 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC5.44□□□□□ -1.54
CCDC28BQ9BUN5 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
CCDC28BQ9BUN5 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC5.44□□□□□ -1.54
CCDC28BQ9BUN5 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
CCDC28BQ9BUN5 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CCDC28BQ9BUN5 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
CCDC28BQ9BUN5 UEVLD-202ENST00000320750 1799 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CCDC28BQ9BUN5 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CCDC28BQ9BUN5 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CCDC28BQ9BUN5 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC5.43□□□□□ -1.54
CCDC28BQ9BUN5 SCGB1D4-201ENST00000358585 439 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
CCDC28BQ9BUN5 PPIAP9-201ENST00000403866 498 ntBASIC5.43□□□□□ -1.54
CCDC28BQ9BUN5 NANOGP4-201ENST00000427230 913 ntBASIC5.43□□□□□ -1.54
CCDC28BQ9BUN5 RPL7AP49-201ENST00000429522 581 ntBASIC5.43□□□□□ -1.54
CCDC28BQ9BUN5 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC5.43□□□□□ -1.54
CCDC28BQ9BUN5 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
CCDC28BQ9BUN5 AC008063.2-201ENST00000432251 619 ntTSL 2 BASIC5.43□□□□□ -1.54
CCDC28BQ9BUN5 AL591438.1-201ENST00000433508 581 ntBASIC5.43□□□□□ -1.54
CCDC28BQ9BUN5 PPIAP32-201ENST00000449940 472 ntBASIC5.43□□□□□ -1.54
CCDC28BQ9BUN5 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC5.43□□□□□ -1.54
CCDC28BQ9BUN5 AC097537.1-201ENST00000514864 1213 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CCDC28BQ9BUN5 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC5.43□□□□□ -1.54
CCDC28BQ9BUN5 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC5.43□□□□□ -1.54
CCDC28BQ9BUN5 MAL2-207ENST00000522828 603 ntTSL 3 BASIC5.43□□□□□ -1.54
CCDC28BQ9BUN5 PPP1R42-212ENST00000522909 1282 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
CCDC28BQ9BUN5 AP000755.1-201ENST00000527100 507 ntTSL 3 BASIC5.43□□□□□ -1.54
CCDC28BQ9BUN5 TRIM51DP-201ENST00000529746 596 ntBASIC5.43□□□□□ -1.54
CCDC28BQ9BUN5 ATP5G2-205ENST00000549748 728 ntTSL 2 BASIC5.43□□□□□ -1.54
CCDC28BQ9BUN5 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC5.43□□□□□ -1.54
CCDC28BQ9BUN5 CASC22-201ENST00000569713 386 ntTSL 5 BASIC5.43□□□□□ -1.54
CCDC28BQ9BUN5 AL078601.3-201ENST00000573303 535 ntBASIC5.43□□□□□ -1.54
CCDC28BQ9BUN5 MTATP6P25-201ENST00000574491 261 ntBASIC5.43□□□□□ -1.54
CCDC28BQ9BUN5 MIR4776-2-201ENST00000580204 80 ntBASIC5.43□□□□□ -1.54
CCDC28BQ9BUN5 MIR4311-201ENST00000580794 100 ntBASIC5.43□□□□□ -1.54
CCDC28BQ9BUN5 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC5.43□□□□□ -1.54
CCDC28BQ9BUN5 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC5.43□□□□□ -1.54
CCDC28BQ9BUN5 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
CCDC28BQ9BUN5 AC002044.3-201ENST00000623314 541 ntBASIC5.43□□□□□ -1.54
CCDC28BQ9BUN5 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC5.43□□□□□ -1.54
CCDC28BQ9BUN5 HSPD1P9-201ENST00000420325 1636 ntBASIC5.43□□□□□ -1.54
CCDC28BQ9BUN5 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
CCDC28BQ9BUN5 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
CCDC28BQ9BUN5 AC100757.1-201ENST00000616872 1835 ntBASIC5.43□□□□□ -1.54
CCDC28BQ9BUN5 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC5.43□□□□□ -1.54
CCDC28BQ9BUN5 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC5.43□□□□□ -1.54
CCDC28BQ9BUN5 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CCDC28BQ9BUN5 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC5.43□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 103.8 ms