Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 NACA-203ENST00000454682 6629 ntTSL 5 BASIC7.51□□□□□ -1.21
SYNGAP1Q96PV0 SORCS1-210ENST00000622431 6701 ntTSL 5 BASIC7.51□□□□□ -1.21
SYNGAP1Q96PV0 FBXL13-208ENST00000456695 1605 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
SYNGAP1Q96PV0 TOR1AIP2-203ENST00000482587 7067 ntTSL 2 BASIC7.51□□□□□ -1.21
SYNGAP1Q96PV0 RAPGEF4-214ENST00000538974 3920 ntTSL 2 BASIC7.51□□□□□ -1.21
SYNGAP1Q96PV0 VN1R1-201ENST00000321039 2353 ntAPPRIS P1 BASIC7.51□□□□□ -1.21
SYNGAP1Q96PV0 ADAL-203ENST00000428046 3514 ntTSL 2 BASIC7.51□□□□□ -1.21
SYNGAP1Q96PV0 AC244100.3-202ENST00000617328 1721 ntTSL 2 BASIC7.51□□□□□ -1.21
SYNGAP1Q96PV0 NBPF9-205ENST00000613595 4527 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
SYNGAP1Q96PV0 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC7.51□□□□□ -1.21
SYNGAP1Q96PV0 HSD17B4-202ENST00000414835 2551 ntTSL 2 BASIC7.51□□□□□ -1.21
SYNGAP1Q96PV0 CCDC158-201ENST00000388914 3663 ntAPPRIS P1 TSL 5 BASIC7.51□□□□□ -1.21
SYNGAP1Q96PV0 ZNF790-206ENST00000613249 2183 ntAPPRIS P1 TSL 4 BASIC7.51□□□□□ -1.21
SYNGAP1Q96PV0 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC7.51□□□□□ -1.21
SYNGAP1Q96PV0 BEST3-202ENST00000330891 3532 ntAPPRIS P1 TSL 5 BASIC7.51□□□□□ -1.21
SYNGAP1Q96PV0 ANK2-215ENST00000509550 3638 ntTSL 2 BASIC7.51□□□□□ -1.21
SYNGAP1Q96PV0 OLFM4-201ENST00000219022 2897 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
SYNGAP1Q96PV0 AC011503.2-201ENST00000594230 1500 ntBASIC7.51□□□□□ -1.21
SYNGAP1Q96PV0 DTNA-226ENST00000596745 1508 ntTSL 2 BASIC7.51□□□□□ -1.21
SYNGAP1Q96PV0 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC7.51□□□□□ -1.21
SYNGAP1Q96PV0 RNFT1P3-201ENST00000340898 1052 ntBASIC7.51□□□□□ -1.21
SYNGAP1Q96PV0 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC7.51□□□□□ -1.21
SYNGAP1Q96PV0 TSACC-201ENST00000368251 438 ntAPPRIS P1 TSL 3 BASIC7.51□□□□□ -1.21
SYNGAP1Q96PV0 OR5H15-201ENST00000383696 930 ntBASIC7.51□□□□□ -1.21
SYNGAP1Q96PV0 RNU6-224P-201ENST00000384055 107 ntBASIC7.51□□□□□ -1.21
SYNGAP1Q96PV0 NUDT19P3-201ENST00000404698 555 ntBASIC7.51□□□□□ -1.21
SYNGAP1Q96PV0 TANK-206ENST00000406287 875 ntTSL 5 BASIC7.51□□□□□ -1.21
SYNGAP1Q96PV0 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC7.51□□□□□ -1.21
SYNGAP1Q96PV0 AL359092.1-201ENST00000417156 265 ntBASIC7.51□□□□□ -1.21
SYNGAP1Q96PV0 PVALB-204ENST00000417718 569 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
SYNGAP1Q96PV0 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC7.51□□□□□ -1.21
SYNGAP1Q96PV0 RPF2P1-201ENST00000424137 906 ntBASIC7.51□□□□□ -1.21
SYNGAP1Q96PV0 AC108479.1-201ENST00000431142 427 ntBASIC7.51□□□□□ -1.21
SYNGAP1Q96PV0 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC7.51□□□□□ -1.21
SYNGAP1Q96PV0 AL035701.1-202ENST00000437249 371 ntTSL 3 BASIC7.51□□□□□ -1.21
SYNGAP1Q96PV0 AC092393.1-201ENST00000439625 742 ntBASIC7.51□□□□□ -1.21
SYNGAP1Q96PV0 COX4I1P2-201ENST00000447446 547 ntBASIC7.51□□□□□ -1.21
SYNGAP1Q96PV0 OTX2P1-201ENST00000450956 354 ntBASIC7.51□□□□□ -1.21
SYNGAP1Q96PV0 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC7.51□□□□□ -1.21
SYNGAP1Q96PV0 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC7.51□□□□□ -1.21
SYNGAP1Q96PV0 SYPL1P1-201ENST00000473622 768 ntBASIC7.51□□□□□ -1.21
SYNGAP1Q96PV0 RPS27AP16-201ENST00000492222 470 ntBASIC7.51□□□□□ -1.21
SYNGAP1Q96PV0 F11-205ENST00000492972 1204 ntTSL 2 BASIC7.51□□□□□ -1.21
SYNGAP1Q96PV0 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
SYNGAP1Q96PV0 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC7.51□□□□□ -1.21
SYNGAP1Q96PV0 RNU6-759P-201ENST00000516740 103 ntBASIC7.51□□□□□ -1.21
SYNGAP1Q96PV0 AC067904.2-201ENST00000517322 1283 ntBASIC7.51□□□□□ -1.21
SYNGAP1Q96PV0 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC7.51□□□□□ -1.21
SYNGAP1Q96PV0 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC7.51□□□□□ -1.21
SYNGAP1Q96PV0 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC7.51□□□□□ -1.21
SYNGAP1Q96PV0 TBCA-209ENST00000522370 435 ntTSL 3 BASIC7.51□□□□□ -1.21
SYNGAP1Q96PV0 IGHVIII-67-4-201ENST00000524281 296 ntBASIC7.51□□□□□ -1.21
SYNGAP1Q96PV0 CYCSP25-201ENST00000525280 316 ntBASIC7.51□□□□□ -1.21
SYNGAP1Q96PV0 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC7.51□□□□□ -1.21
SYNGAP1Q96PV0 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC7.51□□□□□ -1.21
SYNGAP1Q96PV0 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC7.51□□□□□ -1.21
SYNGAP1Q96PV0 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC7.51□□□□□ -1.21
SYNGAP1Q96PV0 AC007346.1-201ENST00000569208 867 ntBASIC7.51□□□□□ -1.21
SYNGAP1Q96PV0 AP005230.1-204ENST00000579097 779 ntTSL 2 BASIC7.51□□□□□ -1.21
SYNGAP1Q96PV0 MIR4502-201ENST00000580432 81 ntBASIC7.51□□□□□ -1.21
SYNGAP1Q96PV0 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC7.51□□□□□ -1.21
SYNGAP1Q96PV0 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC7.51□□□□□ -1.21
SYNGAP1Q96PV0 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC7.51□□□□□ -1.21
SYNGAP1Q96PV0 AC015802.2-201ENST00000589690 189 ntBASIC7.51□□□□□ -1.21
SYNGAP1Q96PV0 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC7.51□□□□□ -1.21
SYNGAP1Q96PV0 AL589863.1-201ENST00000595383 631 ntBASIC7.51□□□□□ -1.21
SYNGAP1Q96PV0 VN1R88P-201ENST00000596787 292 ntBASIC7.51□□□□□ -1.21
SYNGAP1Q96PV0 DUXAP11-201ENST00000603858 526 ntBASIC7.51□□□□□ -1.21
SYNGAP1Q96PV0 AC005277.2-201ENST00000617898 390 ntBASIC7.51□□□□□ -1.21
SYNGAP1Q96PV0 DLC1-215ENST00000520226 3556 ntTSL 2 BASIC7.51□□□□□ -1.21
SYNGAP1Q96PV0 LARP1B-201ENST00000326639 4891 ntAPPRIS P1 TSL 5 BASIC7.5□□□□□ -1.21
SYNGAP1Q96PV0 FBXW10-203ENST00000395665 3431 ntAPPRIS P3 TSL 1 (best) BASIC7.5□□□□□ -1.21
SYNGAP1Q96PV0 TCF7L2-220ENST00000543371 4037 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
SYNGAP1Q96PV0 ZNF449-201ENST00000339249 3773 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
SYNGAP1Q96PV0 EOGT-201ENST00000295571 4138 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
SYNGAP1Q96PV0 XPO1-202ENST00000404992 4105 ntAPPRIS P1 TSL 2 BASIC7.5□□□□□ -1.21
SYNGAP1Q96PV0 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC7.5□□□□□ -1.21
SYNGAP1Q96PV0 MRPS27-201ENST00000261413 2785 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
SYNGAP1Q96PV0 MCCC1-210ENST00000492597 2774 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
SYNGAP1Q96PV0 GJA10-203ENST00000638915 1479 ntAPPRIS ALT2 TSL 5 BASIC7.5□□□□□ -1.21
SYNGAP1Q96PV0 ARRDC3-201ENST00000265138 4188 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
SYNGAP1Q96PV0 ZMYM4-201ENST00000314607 6994 ntAPPRIS P1 TSL 2 BASIC7.5□□□□□ -1.21
SYNGAP1Q96PV0 AC008080.4-201ENST00000420185 1589 ntTSL 2 BASIC7.5□□□□□ -1.21
SYNGAP1Q96PV0 GPRIN3-202ENST00000609438 14244 ntAPPRIS P1 TSL 2 BASIC7.5□□□□□ -1.21
SYNGAP1Q96PV0 EPHA3-203ENST00000494014 3085 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
SYNGAP1Q96PV0 BMX-201ENST00000342014 2499 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
SYNGAP1Q96PV0 ZNF559-ZNF177-202ENST00000446085 2470 ntTSL 5 BASIC7.5□□□□□ -1.21
SYNGAP1Q96PV0 AL390237.1-201ENST00000404226 1415 ntBASIC7.5□□□□□ -1.21
SYNGAP1Q96PV0 USP32-214ENST00000592339 4045 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
SYNGAP1Q96PV0 GAGE1-204ENST00000619375 2873 ntAPPRIS P1 TSL 5 BASIC7.5□□□□□ -1.21
SYNGAP1Q96PV0 RPL7L1-201ENST00000304734 3769 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
SYNGAP1Q96PV0 CNKSR3-205ENST00000607772 21063 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
SYNGAP1Q96PV0 LINC01087-201ENST00000431979 3516 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
SYNGAP1Q96PV0 LUZP1-203ENST00000418342 8421 ntAPPRIS P1 TSL 5 BASIC7.5□□□□□ -1.21
SYNGAP1Q96PV0 SERPINB8-208ENST00000542677 3192 ntTSL 2 BASIC7.5□□□□□ -1.21
SYNGAP1Q96PV0 GFPT1-202ENST00000361060 8632 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
SYNGAP1Q96PV0 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC7.5□□□□□ -1.21
SYNGAP1Q96PV0 MTND1P23-201ENST00000416931 372 ntBASIC7.5□□□□□ -1.21
SYNGAP1Q96PV0 AC118754.1-201ENST00000416958 370 ntTSL 3 BASIC7.5□□□□□ -1.21
SYNGAP1Q96PV0 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC7.5□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 104.4 ms