Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 APOOL-203ENST00000622540 6466 ntTSL 5 BASIC8.35□□□□□ -1.07
TRIM47Q96LD4 ZEB2-AS1-202ENST00000427278 1322 ntTSL 5 BASIC8.35□□□□□ -1.07
TRIM47Q96LD4 ATF6-201ENST00000367942 7496 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
TRIM47Q96LD4 KIF1B-203ENST00000377083 5885 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
TRIM47Q96LD4 ZNF181-204ENST00000492450 5086 ntAPPRIS P3 TSL 1 (best) BASIC8.35□□□□□ -1.07
TRIM47Q96LD4 LNPEP-202ENST00000395770 3888 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
TRIM47Q96LD4 EPS15P1-202ENST00000459691 2071 ntBASIC8.35□□□□□ -1.07
TRIM47Q96LD4 MTND4P1-201ENST00000457501 1466 ntBASIC8.35□□□□□ -1.07
TRIM47Q96LD4 RN7SKP250-201ENST00000363924 321 ntBASIC8.35□□□□□ -1.07
TRIM47Q96LD4 Y_RNA.529-201ENST00000384586 119 ntBASIC8.35□□□□□ -1.07
TRIM47Q96LD4 AL353133.1-201ENST00000407695 401 ntBASIC8.35□□□□□ -1.07
TRIM47Q96LD4 RN7SKP205-201ENST00000410999 307 ntBASIC8.35□□□□□ -1.07
TRIM47Q96LD4 AC104463.1-201ENST00000411431 365 ntTSL 5 BASIC8.35□□□□□ -1.07
TRIM47Q96LD4 AC009965.1-201ENST00000411436 570 ntTSL 4 BASIC8.35□□□□□ -1.07
TRIM47Q96LD4 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC8.35□□□□□ -1.07
TRIM47Q96LD4 AC004448.2-201ENST00000422360 586 ntBASIC8.35□□□□□ -1.07
TRIM47Q96LD4 AC233728.2-201ENST00000425348 757 ntBASIC8.35□□□□□ -1.07
TRIM47Q96LD4 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC8.35□□□□□ -1.07
TRIM47Q96LD4 AL359634.1-201ENST00000429807 1179 ntTSL 5 BASIC8.35□□□□□ -1.07
TRIM47Q96LD4 USP9YP16-201ENST00000430287 407 ntBASIC8.35□□□□□ -1.07
TRIM47Q96LD4 MED14P1-201ENST00000430517 648 ntBASIC8.35□□□□□ -1.07
TRIM47Q96LD4 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC8.35□□□□□ -1.07
TRIM47Q96LD4 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC8.35□□□□□ -1.07
TRIM47Q96LD4 AC104850.1-201ENST00000435940 476 ntBASIC8.35□□□□□ -1.07
TRIM47Q96LD4 BACH1-IT2-201ENST00000436529 806 ntTSL 5 BASIC8.35□□□□□ -1.07
TRIM47Q96LD4 MTND3P2-201ENST00000438452 342 ntBASIC8.35□□□□□ -1.07
TRIM47Q96LD4 AURKAPS1-201ENST00000451805 1212 ntBASIC8.35□□□□□ -1.07
TRIM47Q96LD4 PMS2P11-201ENST00000451831 574 ntBASIC8.35□□□□□ -1.07
TRIM47Q96LD4 ENTPD3-AS1-204ENST00000452768 724 ntTSL 2 BASIC8.35□□□□□ -1.07
TRIM47Q96LD4 USP9YP23-201ENST00000455085 407 ntBASIC8.35□□□□□ -1.07
TRIM47Q96LD4 CDC42P1-201ENST00000456658 548 ntBASIC8.35□□□□□ -1.07
TRIM47Q96LD4 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC8.35□□□□□ -1.07
TRIM47Q96LD4 GAPDHP53-201ENST00000458397 924 ntBASIC8.35□□□□□ -1.07
TRIM47Q96LD4 RPL23AP44-201ENST00000482216 473 ntBASIC8.35□□□□□ -1.07
TRIM47Q96LD4 RPL29P23-201ENST00000486188 442 ntBASIC8.35□□□□□ -1.07
TRIM47Q96LD4 OR9N1P-201ENST00000491296 333 ntBASIC8.35□□□□□ -1.07
TRIM47Q96LD4 AC110716.1-201ENST00000506934 607 ntTSL 2 BASIC8.35□□□□□ -1.07
TRIM47Q96LD4 Vault.2-201ENST00000516519 98 ntBASIC8.35□□□□□ -1.07
TRIM47Q96LD4 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC8.35□□□□□ -1.07
TRIM47Q96LD4 MAL2-205ENST00000521048 575 ntTSL 4 BASIC8.35□□□□□ -1.07
TRIM47Q96LD4 PTTG3P-201ENST00000521862 606 ntBASIC8.35□□□□□ -1.07
TRIM47Q96LD4 OR8I1P-201ENST00000529291 931 ntBASIC8.35□□□□□ -1.07
TRIM47Q96LD4 AF235103.1-201ENST00000530223 439 ntTSL 3 BASIC8.35□□□□□ -1.07
TRIM47Q96LD4 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC8.35□□□□□ -1.07
TRIM47Q96LD4 SRSF5-209ENST00000555349 565 ntTSL 4 BASIC8.35□□□□□ -1.07
TRIM47Q96LD4 AC087477.6-201ENST00000559595 843 ntBASIC8.35□□□□□ -1.07
TRIM47Q96LD4 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC8.35□□□□□ -1.07
TRIM47Q96LD4 MIR4999-201ENST00000585029 91 ntBASIC8.35□□□□□ -1.07
TRIM47Q96LD4 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC8.35□□□□□ -1.07
TRIM47Q96LD4 Metazoa_SRP.38-201ENST00000615981 254 ntBASIC8.35□□□□□ -1.07
TRIM47Q96LD4 OR1N2-202ENST00000616791 993 ntAPPRIS P2 BASIC8.35□□□□□ -1.07
TRIM47Q96LD4 VIPR1-AS1-221ENST00000626992 602 ntTSL 5 BASIC8.35□□□□□ -1.07
TRIM47Q96LD4 PTP4A1-206ENST00000627002 447 ntTSL 5 BASIC8.35□□□□□ -1.07
TRIM47Q96LD4 BRDT-202ENST00000362005 3409 ntAPPRIS P3 TSL 1 (best) BASIC8.35□□□□□ -1.07
TRIM47Q96LD4 AC091806.1-201ENST00000452690 3000 ntTSL 2 BASIC8.35□□□□□ -1.07
TRIM47Q96LD4 PSD3-220ENST00000615573 5843 ntTSL 5 BASIC8.35□□□□□ -1.07
TRIM47Q96LD4 STK33-201ENST00000315204 2707 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
TRIM47Q96LD4 AL023806.3-201ENST00000638502 2704 ntBASIC8.35□□□□□ -1.07
TRIM47Q96LD4 HKR1-223ENST00000591471 3472 ntTSL 2 BASIC8.35□□□□□ -1.07
TRIM47Q96LD4 WNK3-203ENST00000375169 11172 ntAPPRIS ALT1 TSL 5 BASIC8.35□□□□□ -1.07
TRIM47Q96LD4 MMP10-201ENST00000279441 1758 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
TRIM47Q96LD4 GARNL3-202ENST00000373387 3800 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
TRIM47Q96LD4 CPM-202ENST00000546373 2116 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
TRIM47Q96LD4 ZFX-201ENST00000304543 2996 ntAPPRIS P1 TSL 5 BASIC8.34□□□□□ -1.07
TRIM47Q96LD4 AP001350.1-201ENST00000601906 1524 ntBASIC8.34□□□□□ -1.07
TRIM47Q96LD4 LRIG3-202ENST00000379141 3667 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
TRIM47Q96LD4 CXCR4-202ENST00000409817 1895 ntAPPRIS P3 BASIC8.34□□□□□ -1.07
TRIM47Q96LD4 ZNF81-204ENST00000376954 7933 ntAPPRIS P1 TSL 5 BASIC8.34□□□□□ -1.07
TRIM47Q96LD4 RAB2B-201ENST00000397762 2928 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
TRIM47Q96LD4 AL096816.1-201ENST00000623300 2920 ntBASIC8.34□□□□□ -1.07
TRIM47Q96LD4 RNF146-210ENST00000608991 2169 ntAPPRIS P3 TSL 4 BASIC8.34□□□□□ -1.07
TRIM47Q96LD4 ARFGEF3-201ENST00000251691 14877 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
TRIM47Q96LD4 MAPK10-298ENST00000641297 3040 ntAPPRIS P2 BASIC8.34□□□□□ -1.07
TRIM47Q96LD4 AL137100.1-201ENST00000556703 1620 ntBASIC8.34□□□□□ -1.07
TRIM47Q96LD4 CNPY1-204ENST00000636446 1637 ntAPPRIS P5 TSL 5 BASIC8.34□□□□□ -1.07
TRIM47Q96LD4 ANKRD36BP2-207ENST00000622311 5398 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
TRIM47Q96LD4 PDXDC1-201ENST00000325823 1113 ntTSL 5 BASIC8.34□□□□□ -1.07
TRIM47Q96LD4 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
TRIM47Q96LD4 Y_RNA.450-201ENST00000384198 113 ntBASIC8.34□□□□□ -1.07
TRIM47Q96LD4 RNU6-738P-201ENST00000384531 106 ntBASIC8.34□□□□□ -1.07
TRIM47Q96LD4 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC8.34□□□□□ -1.07
TRIM47Q96LD4 AL079342.2-201ENST00000403367 482 ntBASIC8.34□□□□□ -1.07
TRIM47Q96LD4 RPL7P27-201ENST00000403775 720 ntBASIC8.34□□□□□ -1.07
TRIM47Q96LD4 RN7SKP91-201ENST00000410852 288 ntBASIC8.34□□□□□ -1.07
TRIM47Q96LD4 RNU4-61P-201ENST00000411243 107 ntBASIC8.34□□□□□ -1.07
TRIM47Q96LD4 AC002524.1-201ENST00000411687 547 ntBASIC8.34□□□□□ -1.07
TRIM47Q96LD4 LINC00396-201ENST00000411690 439 ntTSL 3 BASIC8.34□□□□□ -1.07
TRIM47Q96LD4 RPL21P111-201ENST00000418453 477 ntBASIC8.34□□□□□ -1.07
TRIM47Q96LD4 NCOR1P3-201ENST00000420479 303 ntBASIC8.34□□□□□ -1.07
TRIM47Q96LD4 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC8.34□□□□□ -1.07
TRIM47Q96LD4 AC009518.3-201ENST00000438972 253 ntBASIC8.34□□□□□ -1.07
TRIM47Q96LD4 AL445623.1-201ENST00000440888 237 ntTSL 3 BASIC8.34□□□□□ -1.07
TRIM47Q96LD4 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC8.34□□□□□ -1.07
TRIM47Q96LD4 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC8.34□□□□□ -1.07
TRIM47Q96LD4 RHEBP1-201ENST00000448647 556 ntBASIC8.34□□□□□ -1.07
TRIM47Q96LD4 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC8.34□□□□□ -1.07
TRIM47Q96LD4 SUMO1P2-201ENST00000452524 304 ntBASIC8.34□□□□□ -1.07
TRIM47Q96LD4 Z99916.1-201ENST00000454253 482 ntTSL 3 BASIC8.34□□□□□ -1.07
TRIM47Q96LD4 LINC00533-201ENST00000456103 537 ntTSL 3 BASIC8.34□□□□□ -1.07
TRIM47Q96LD4 CCNJP2-201ENST00000457810 1163 ntBASIC8.34□□□□□ -1.07
Retrieved 100 of 98,524 protein–RNA pairs in 111.9 ms