Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 AL390036.1-202ENST00000634635 2439 ntTSL 5 BASIC3.67□□□□□ -1.82
ALMS1Q8TCU4 ZNF793-202ENST00000542455 4073 ntTSL 5 BASIC3.67□□□□□ -1.82
ALMS1Q8TCU4 CLTC-201ENST00000269122 7760 ntAPPRIS P3 TSL 1 (best) BASIC3.67□□□□□ -1.82
ALMS1Q8TCU4 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC3.67□□□□□ -1.82
ALMS1Q8TCU4 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
ALMS1Q8TCU4 ERG-205ENST00000398910 4954 ntTSL 5 BASIC3.67□□□□□ -1.82
ALMS1Q8TCU4 ENTPD1-205ENST00000453258 5044 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
ALMS1Q8TCU4 EFCAB6-203ENST00000396231 4424 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
ALMS1Q8TCU4 HP1BP3-201ENST00000312239 3938 ntAPPRIS P1 TSL 2 BASIC3.67□□□□□ -1.82
ALMS1Q8TCU4 RNU4-2-201ENST00000365668 141 ntBASIC3.66□□□□□ -1.82
ALMS1Q8TCU4 CNOT7P1-201ENST00000429006 852 ntBASIC3.66□□□□□ -1.82
ALMS1Q8TCU4 AL162739.1-201ENST00000450606 307 ntBASIC3.66□□□□□ -1.82
ALMS1Q8TCU4 TOMM22P4-201ENST00000511318 336 ntBASIC3.66□□□□□ -1.82
ALMS1Q8TCU4 RNA5SP116-201ENST00000516132 98 ntBASIC3.66□□□□□ -1.82
ALMS1Q8TCU4 AP003080.1-202ENST00000526526 915 ntBASIC3.66□□□□□ -1.82
ALMS1Q8TCU4 OCLM-201ENST00000574641 884 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
ALMS1Q8TCU4 AC135068.12-201ENST00000637370 931 ntBASIC3.66□□□□□ -1.82
ALMS1Q8TCU4 CLASP2-213ENST00000480013 5972 ntTSL 5 BASIC3.66□□□□□ -1.82
ALMS1Q8TCU4 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC3.66□□□□□ -1.82
ALMS1Q8TCU4 MYO5C-201ENST00000261839 6971 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
ALMS1Q8TCU4 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
ALMS1Q8TCU4 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC3.66□□□□□ -1.82
ALMS1Q8TCU4 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
ALMS1Q8TCU4 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
ALMS1Q8TCU4 CUZD1-205ENST00000368904 2903 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
ALMS1Q8TCU4 KIF20A-201ENST00000394894 3201 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
ALMS1Q8TCU4 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC3.66□□□□□ -1.82
ALMS1Q8TCU4 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
ALMS1Q8TCU4 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC3.66□□□□□ -1.82
ALMS1Q8TCU4 SNX10-203ENST00000409367 746 ntTSL 5 BASIC3.66□□□□□ -1.82
ALMS1Q8TCU4 AC093655.2-201ENST00000425735 631 ntBASIC3.66□□□□□ -1.82
ALMS1Q8TCU4 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC3.66□□□□□ -1.82
ALMS1Q8TCU4 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC3.66□□□□□ -1.82
ALMS1Q8TCU4 RPS23P7-201ENST00000466210 444 ntBASIC3.66□□□□□ -1.82
ALMS1Q8TCU4 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC3.66□□□□□ -1.82
ALMS1Q8TCU4 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC3.66□□□□□ -1.82
ALMS1Q8TCU4 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC3.66□□□□□ -1.82
ALMS1Q8TCU4 UBE2FP2-201ENST00000566646 462 ntBASIC3.66□□□□□ -1.82
ALMS1Q8TCU4 MIR1254-2-201ENST00000579553 63 ntBASIC3.66□□□□□ -1.82
ALMS1Q8TCU4 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC3.66□□□□□ -1.82
ALMS1Q8TCU4 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC3.66□□□□□ -1.82
ALMS1Q8TCU4 AC068724.3-201ENST00000625906 87 ntBASIC3.66□□□□□ -1.82
ALMS1Q8TCU4 Z98755.1-201ENST00000407015 1384 ntBASIC3.66□□□□□ -1.82
ALMS1Q8TCU4 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC3.66□□□□□ -1.82
ALMS1Q8TCU4 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC3.66□□□□□ -1.82
ALMS1Q8TCU4 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC3.66□□□□□ -1.82
ALMS1Q8TCU4 RC3H1-203ENST00000367696 11261 ntAPPRIS P3 TSL 5 BASIC3.66□□□□□ -1.82
ALMS1Q8TCU4 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC3.66□□□□□ -1.82
ALMS1Q8TCU4 SLC7A6-209ENST00000566454 6308 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
ALMS1Q8TCU4 TTC8-217ENST00000622513 5270 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
ALMS1Q8TCU4 OR2H1-201ENST00000377132 2253 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
ALMS1Q8TCU4 AC007064.3-201ENST00000422608 359 ntBASIC3.66□□□□□ -1.82
ALMS1Q8TCU4 KNOP1P3-201ENST00000446933 426 ntBASIC3.66□□□□□ -1.82
ALMS1Q8TCU4 CYCSP42-201ENST00000450823 238 ntBASIC3.66□□□□□ -1.82
ALMS1Q8TCU4 AL161747.1-201ENST00000480068 358 ntBASIC3.66□□□□□ -1.82
ALMS1Q8TCU4 AC078899.1-201ENST00000521432 1185 ntBASIC3.66□□□□□ -1.82
ALMS1Q8TCU4 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC3.66□□□□□ -1.82
ALMS1Q8TCU4 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC3.66□□□□□ -1.82
ALMS1Q8TCU4 AL392048.1-201ENST00000613946 534 ntBASIC3.66□□□□□ -1.82
ALMS1Q8TCU4 AHI1-204ENST00000367800 5921 ntAPPRIS P2 TSL 1 (best) BASIC3.66□□□□□ -1.82
ALMS1Q8TCU4 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
ALMS1Q8TCU4 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
ALMS1Q8TCU4 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC3.66□□□□□ -1.82
ALMS1Q8TCU4 LRRC28-201ENST00000301981 5971 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
ALMS1Q8TCU4 TGFBR3-202ENST00000370399 4550 ntAPPRIS ALT1 TSL 1 (best) BASIC3.66□□□□□ -1.82
ALMS1Q8TCU4 MT-RNR2-201ENST00000387347 1559 ntBASIC3.66□□□□□ -1.82
ALMS1Q8TCU4 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
ALMS1Q8TCU4 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
ALMS1Q8TCU4 LMO7-207ENST00000465261 5580 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
ALMS1Q8TCU4 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC3.66□□□□□ -1.82
ALMS1Q8TCU4 RN7SKP126-201ENST00000411143 300 ntBASIC3.66□□□□□ -1.82
ALMS1Q8TCU4 RSL24D1P6-201ENST00000426934 401 ntBASIC3.66□□□□□ -1.82
ALMS1Q8TCU4 FAM96AP1-201ENST00000430879 482 ntBASIC3.66□□□□□ -1.82
ALMS1Q8TCU4 AC109327.1-201ENST00000471666 403 ntBASIC3.66□□□□□ -1.82
ALMS1Q8TCU4 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC3.66□□□□□ -1.82
ALMS1Q8TCU4 KCTD9P4-201ENST00000526766 1166 ntBASIC3.66□□□□□ -1.82
ALMS1Q8TCU4 EDDM3DP-201ENST00000554692 434 ntBASIC3.66□□□□□ -1.82
ALMS1Q8TCU4 MIR4675-201ENST00000577898 77 ntBASIC3.66□□□□□ -1.82
ALMS1Q8TCU4 MIR4277-201ENST00000578298 84 ntBASIC3.66□□□□□ -1.82
ALMS1Q8TCU4 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC3.66□□□□□ -1.82
ALMS1Q8TCU4 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
ALMS1Q8TCU4 ZNF37A-201ENST00000351773 7027 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
ALMS1Q8TCU4 AC114774.1-201ENST00000507410 1770 ntBASIC3.65□□□□□ -1.82
ALMS1Q8TCU4 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.82
ALMS1Q8TCU4 PPIL1-201ENST00000373699 1739 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
ALMS1Q8TCU4 NLGN4Y-203ENST00000382868 5338 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
ALMS1Q8TCU4 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC3.65□□□□□ -1.82
ALMS1Q8TCU4 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC3.65□□□□□ -1.82
ALMS1Q8TCU4 KIDINS220-206ENST00000473731 7248 ntTSL 5 BASIC3.65□□□□□ -1.82
ALMS1Q8TCU4 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC3.65□□□□□ -1.82
ALMS1Q8TCU4 GPBP1-203ENST00000424459 4683 ntAPPRIS ALT2 TSL 5 BASIC3.65□□□□□ -1.82
ALMS1Q8TCU4 ALMS1-204ENST00000484298 12595 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.82
ALMS1Q8TCU4 LAMTOR3-201ENST00000226522 1220 ntTSL 3 BASIC3.65□□□□□ -1.82
ALMS1Q8TCU4 OR5B12-201ENST00000302572 1054 ntAPPRIS P1 BASIC3.65□□□□□ -1.82
ALMS1Q8TCU4 AL049693.1-201ENST00000402760 611 ntBASIC3.65□□□□□ -1.82
ALMS1Q8TCU4 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC3.65□□□□□ -1.82
ALMS1Q8TCU4 DDX39BP1-205ENST00000422507 192 ntBASIC3.65□□□□□ -1.82
ALMS1Q8TCU4 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC3.65□□□□□ -1.82
ALMS1Q8TCU4 AL451136.1-201ENST00000435399 325 ntBASIC3.65□□□□□ -1.82
ALMS1Q8TCU4 AC063943.1-201ENST00000465434 453 ntBASIC3.65□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 71.4 ms