Protein–RNA interactions for Protein: Q8NDV3

SMC1B, Structural maintenance of chromosomes protein 1B, humanhuman

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1BQ8NDV3 AC005840.5-201ENST00000619166 599 ntBASIC7.26□□□□□ -1.25
SMC1BQ8NDV3 AP003476.1-201ENST00000623984 516 ntBASIC7.26□□□□□ -1.25
SMC1BQ8NDV3 AC010608.3-201ENST00000625048 527 ntBASIC7.26□□□□□ -1.25
SMC1BQ8NDV3 AC099654.9-201ENST00000637055 678 ntBASIC7.26□□□□□ -1.25
SMC1BQ8NDV3 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC7.26□□□□□ -1.25
SMC1BQ8NDV3 ZNF253-205ENST00000640599 1208 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
SMC1BQ8NDV3 JPX-212ENST00000639185 9658 ntTSL 5 BASIC7.26□□□□□ -1.25
SMC1BQ8NDV3 CAGE1-203ENST00000379918 2877 ntAPPRIS ALT2 TSL 5 BASIC7.26□□□□□ -1.25
SMC1BQ8NDV3 OR4K13-202ENST00000641664 5980 ntAPPRIS P1 BASIC7.26□□□□□ -1.25
SMC1BQ8NDV3 AC126323.2-201ENST00000559985 2369 ntTSL 5 BASIC7.26□□□□□ -1.25
SMC1BQ8NDV3 OOSP2-201ENST00000278855 1633 ntAPPRIS P2 TSL 1 (best) BASIC7.26□□□□□ -1.25
SMC1BQ8NDV3 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC7.26□□□□□ -1.25
SMC1BQ8NDV3 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC7.26□□□□□ -1.25
SMC1BQ8NDV3 KCNJ15-201ENST00000328656 8399 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
SMC1BQ8NDV3 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
SMC1BQ8NDV3 OR5T2-202ENST00000641661 2062 ntAPPRIS ALT2 BASIC7.26□□□□□ -1.25
SMC1BQ8NDV3 AL627171.1-201ENST00000618845 1308 ntBASIC7.26□□□□□ -1.25
SMC1BQ8NDV3 PLCB1-202ENST00000378637 3864 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
SMC1BQ8NDV3 ASTN2-AS1-201ENST00000418250 1756 ntTSL 2 BASIC7.25□□□□□ -1.25
SMC1BQ8NDV3 MYBPC1-223ENST00000553190 3777 ntAPPRIS ALT2 TSL 1 (best) BASIC7.25□□□□□ -1.25
SMC1BQ8NDV3 SATL1-202ENST00000509231 2224 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
SMC1BQ8NDV3 CASC19-228ENST00000641414 1684 ntBASIC7.25□□□□□ -1.25
SMC1BQ8NDV3 FOXJ3-204ENST00000372572 5352 ntAPPRIS P3 TSL 1 (best) BASIC7.25□□□□□ -1.25
SMC1BQ8NDV3 HIPK2-202ENST00000406875 15049 ntAPPRIS P4 TSL 1 (best) BASIC7.25□□□□□ -1.25
SMC1BQ8NDV3 DMD-205ENST00000359836 7339 ntTSL 5 BASIC7.25□□□□□ -1.25
SMC1BQ8NDV3 FGFR2-205ENST00000357555 3690 ntTSL 2 BASIC7.25□□□□□ -1.25
SMC1BQ8NDV3 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC7.25□□□□□ -1.25
SMC1BQ8NDV3 ZNF559-ZNF177-203ENST00000541595 2435 ntAPPRIS P3 TSL 2 BASIC7.25□□□□□ -1.25
SMC1BQ8NDV3 MYPN-202ENST00000358913 6013 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
SMC1BQ8NDV3 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC7.25□□□□□ -1.25
SMC1BQ8NDV3 SSX3-202ENST00000376893 800 ntTSL 2 BASIC7.25□□□□□ -1.25
SMC1BQ8NDV3 RNU6-1000P-201ENST00000391066 106 ntBASIC7.25□□□□□ -1.25
SMC1BQ8NDV3 AC016739.1-201ENST00000405359 345 ntBASIC7.25□□□□□ -1.25
SMC1BQ8NDV3 ERMN-202ENST00000409216 746 ntTSL 4 BASIC7.25□□□□□ -1.25
SMC1BQ8NDV3 SEPT7P8-201ENST00000413308 775 ntBASIC7.25□□□□□ -1.25
SMC1BQ8NDV3 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC7.25□□□□□ -1.25
SMC1BQ8NDV3 VN1R31P-201ENST00000417498 730 ntBASIC7.25□□□□□ -1.25
SMC1BQ8NDV3 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC7.25□□□□□ -1.25
SMC1BQ8NDV3 AL451047.1-201ENST00000424451 814 ntTSL 3 BASIC7.25□□□□□ -1.25
SMC1BQ8NDV3 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC7.25□□□□□ -1.25
SMC1BQ8NDV3 AL512637.2-201ENST00000431287 1256 ntBASIC7.25□□□□□ -1.25
SMC1BQ8NDV3 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC7.25□□□□□ -1.25
SMC1BQ8NDV3 AC092106.1-201ENST00000444291 373 ntBASIC7.25□□□□□ -1.25
SMC1BQ8NDV3 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC7.25□□□□□ -1.25
SMC1BQ8NDV3 AC098826.2-201ENST00000452011 651 ntBASIC7.25□□□□□ -1.25
SMC1BQ8NDV3 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC7.25□□□□□ -1.25
SMC1BQ8NDV3 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC7.25□□□□□ -1.25
SMC1BQ8NDV3 AC007686.1-201ENST00000488511 463 ntBASIC7.25□□□□□ -1.25
SMC1BQ8NDV3 LINC02059-201ENST00000503843 452 ntTSL 3 BASIC7.25□□□□□ -1.25
SMC1BQ8NDV3 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC7.25□□□□□ -1.25
SMC1BQ8NDV3 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC7.25□□□□□ -1.25
SMC1BQ8NDV3 RNU6-334P-201ENST00000517072 102 ntBASIC7.25□□□□□ -1.25
SMC1BQ8NDV3 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC7.25□□□□□ -1.25
SMC1BQ8NDV3 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC7.25□□□□□ -1.25
SMC1BQ8NDV3 HMGN2P36-201ENST00000529541 409 ntBASIC7.25□□□□□ -1.25
SMC1BQ8NDV3 AP000676.2-201ENST00000529711 301 ntBASIC7.25□□□□□ -1.25
SMC1BQ8NDV3 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC7.25□□□□□ -1.25
SMC1BQ8NDV3 AL512310.9-201ENST00000553311 948 ntBASIC7.25□□□□□ -1.25
SMC1BQ8NDV3 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC7.25□□□□□ -1.25
SMC1BQ8NDV3 CD24P2-201ENST00000565486 219 ntBASIC7.25□□□□□ -1.25
SMC1BQ8NDV3 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC7.25□□□□□ -1.25
SMC1BQ8NDV3 RN7SL339P-201ENST00000580597 296 ntBASIC7.25□□□□□ -1.25
SMC1BQ8NDV3 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC7.25□□□□□ -1.25
SMC1BQ8NDV3 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC7.25□□□□□ -1.25
SMC1BQ8NDV3 AL645927.2-201ENST00000618350 349 ntBASIC7.25□□□□□ -1.25
SMC1BQ8NDV3 HCG18-239ENST00000454129 4433 ntTSL 4 BASIC7.25□□□□□ -1.25
SMC1BQ8NDV3 PNPLA4-204ENST00000537427 2559 ntTSL 2 BASIC7.25□□□□□ -1.25
SMC1BQ8NDV3 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
SMC1BQ8NDV3 TDP1-213ENST00000555880 1894 ntTSL 5 BASIC7.25□□□□□ -1.25
SMC1BQ8NDV3 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
SMC1BQ8NDV3 KIAA0586-214ENST00000619416 8233 ntAPPRIS ALT2 TSL 1 (best) BASIC7.25□□□□□ -1.25
SMC1BQ8NDV3 CDKAL1-204ENST00000613575 1673 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
SMC1BQ8NDV3 TMCO5A-205ENST00000559502 1939 ntAPPRIS ALT2 TSL 2 BASIC7.25□□□□□ -1.25
SMC1BQ8NDV3 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
SMC1BQ8NDV3 TLK2-214ENST00000582809 3608 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
SMC1BQ8NDV3 KCNJ15-220ENST00000612702 3046 ntAPPRIS P1 TSL 4 BASIC7.25□□□□□ -1.25
SMC1BQ8NDV3 G6PC-201ENST00000253801 3096 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
SMC1BQ8NDV3 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
SMC1BQ8NDV3 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC7.24□□□□□ -1.25
SMC1BQ8NDV3 MDN1-205ENST00000629399 17400 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
SMC1BQ8NDV3 TRMT10A-202ENST00000394876 1638 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
SMC1BQ8NDV3 SYNPO2-206ENST00000610556 3934 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
SMC1BQ8NDV3 CYP4Z2P-201ENST00000423332 1512 ntBASIC7.24□□□□□ -1.25
SMC1BQ8NDV3 ARHGAP21-201ENST00000320481 4343 ntTSL 5 BASIC7.24□□□□□ -1.25
SMC1BQ8NDV3 MIR23A-201ENST00000385245 73 ntBASIC7.24□□□□□ -1.25
SMC1BQ8NDV3 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC7.24□□□□□ -1.25
SMC1BQ8NDV3 AL589647.1-201ENST00000402485 466 ntBASIC7.24□□□□□ -1.25
SMC1BQ8NDV3 RN7SKP199-201ENST00000410325 305 ntBASIC7.24□□□□□ -1.25
SMC1BQ8NDV3 RPL35AP24-201ENST00000413846 330 ntBASIC7.24□□□□□ -1.25
SMC1BQ8NDV3 RAB9AP4-201ENST00000415230 609 ntBASIC7.24□□□□□ -1.25
SMC1BQ8NDV3 MTCO2P17-201ENST00000424336 677 ntBASIC7.24□□□□□ -1.25
SMC1BQ8NDV3 AL390119.1-201ENST00000440329 312 ntBASIC7.24□□□□□ -1.25
SMC1BQ8NDV3 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC7.24□□□□□ -1.25
SMC1BQ8NDV3 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC7.24□□□□□ -1.25
SMC1BQ8NDV3 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
SMC1BQ8NDV3 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC7.24□□□□□ -1.25
SMC1BQ8NDV3 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC7.24□□□□□ -1.25
SMC1BQ8NDV3 AC091153.1-201ENST00000466297 402 ntBASIC7.24□□□□□ -1.25
SMC1BQ8NDV3 RPL35AP19-201ENST00000469425 329 ntBASIC7.24□□□□□ -1.25
SMC1BQ8NDV3 AC022336.1-201ENST00000475510 337 ntBASIC7.24□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 99 ms