Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 AP002373.2-201ENST00000541631 1060 ntBASIC4.68□□□□□ -1.66
CCDC168Q8NDH2 PCNPP1-201ENST00000552501 511 ntBASIC4.68□□□□□ -1.66
CCDC168Q8NDH2 DUXA-201ENST00000554048 1006 ntAPPRIS P1 TSL 3 BASIC4.68□□□□□ -1.66
CCDC168Q8NDH2 AL139022.1-201ENST00000556127 486 ntTSL 5 BASIC4.68□□□□□ -1.66
CCDC168Q8NDH2 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC4.68□□□□□ -1.66
CCDC168Q8NDH2 MIR5096-201ENST00000583713 70 ntBASIC4.68□□□□□ -1.66
CCDC168Q8NDH2 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CCDC168Q8NDH2 AC092653.1-201ENST00000608509 531 ntBASIC4.68□□□□□ -1.66
CCDC168Q8NDH2 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC4.68□□□□□ -1.66
CCDC168Q8NDH2 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CCDC168Q8NDH2 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC4.68□□□□□ -1.66
CCDC168Q8NDH2 C8orf37-201ENST00000286688 3334 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
CCDC168Q8NDH2 OR52I2-203ENST00000641896 6591 ntAPPRIS ALT2 BASIC4.67□□□□□ -1.66
CCDC168Q8NDH2 ARG1-203ENST00000368087 1532 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
CCDC168Q8NDH2 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CCDC168Q8NDH2 SULF1-201ENST00000260128 5710 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
CCDC168Q8NDH2 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
CCDC168Q8NDH2 EIF4EBP2P3-201ENST00000403144 334 ntBASIC4.67□□□□□ -1.66
CCDC168Q8NDH2 AC006978.2-201ENST00000442800 666 ntAPPRIS P1 TSL 3 BASIC4.67□□□□□ -1.66
CCDC168Q8NDH2 AC092106.1-201ENST00000444291 373 ntBASIC4.67□□□□□ -1.66
CCDC168Q8NDH2 AC234781.3-201ENST00000452540 973 ntBASIC4.67□□□□□ -1.66
CCDC168Q8NDH2 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC4.67□□□□□ -1.66
CCDC168Q8NDH2 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CCDC168Q8NDH2 HMGB1P44-201ENST00000508597 572 ntBASIC4.67□□□□□ -1.66
CCDC168Q8NDH2 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC4.67□□□□□ -1.66
CCDC168Q8NDH2 AC092436.4-201ENST00000510905 483 ntTSL 3 BASIC4.67□□□□□ -1.66
CCDC168Q8NDH2 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC4.67□□□□□ -1.66
CCDC168Q8NDH2 TPM3P3-201ENST00000521343 354 ntBASIC4.67□□□□□ -1.66
CCDC168Q8NDH2 AL121579.2-201ENST00000555466 590 ntBASIC4.67□□□□□ -1.66
CCDC168Q8NDH2 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC4.67□□□□□ -1.66
CCDC168Q8NDH2 AC060766.1-201ENST00000590824 627 ntBASIC4.67□□□□□ -1.66
CCDC168Q8NDH2 RPL27-207ENST00000590864 569 ntTSL 2 BASIC4.67□□□□□ -1.66
CCDC168Q8NDH2 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC4.67□□□□□ -1.66
CCDC168Q8NDH2 AC095055.1-201ENST00000603472 1113 ntBASIC4.67□□□□□ -1.66
CCDC168Q8NDH2 AL359757.1-201ENST00000623176 255 ntBASIC4.67□□□□□ -1.66
CCDC168Q8NDH2 AC022726.2-201ENST00000634673 547 ntBASIC4.67□□□□□ -1.66
CCDC168Q8NDH2 ZNF532-222ENST00000591083 5324 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
CCDC168Q8NDH2 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC4.67□□□□□ -1.66
CCDC168Q8NDH2 OR5A2-201ENST00000302040 6318 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
CCDC168Q8NDH2 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
CCDC168Q8NDH2 NAV3-202ENST00000536525 7386 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
CCDC168Q8NDH2 AC112719.2-201ENST00000501239 1685 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CCDC168Q8NDH2 CSNK1A1-204ENST00000504676 1772 ntTSL 2 BASIC4.67□□□□□ -1.66
CCDC168Q8NDH2 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC4.67□□□□□ -1.66
CCDC168Q8NDH2 MEF2C-217ENST00000510942 3446 ntTSL 5 BASIC4.67□□□□□ -1.66
CCDC168Q8NDH2 AC007938.2-201ENST00000604666 2634 ntBASIC4.67□□□□□ -1.66
CCDC168Q8NDH2 OR4Q3-202ENST00000642117 2165 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
CCDC168Q8NDH2 FSCB-201ENST00000340446 2938 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
CCDC168Q8NDH2 APOL4-203ENST00000352371 3227 ntAPPRIS P4 TSL 1 (best) BASIC4.67□□□□□ -1.66
CCDC168Q8NDH2 FAM208A-210ENST00000614531 3441 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CCDC168Q8NDH2 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
CCDC168Q8NDH2 CCDC125-203ENST00000396499 3615 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
CCDC168Q8NDH2 MYRFL-201ENST00000299350 820 ntTSL 5 BASIC4.67□□□□□ -1.66
CCDC168Q8NDH2 RNU1-43P-201ENST00000365052 165 ntBASIC4.67□□□□□ -1.66
CCDC168Q8NDH2 RNU6-398P-201ENST00000384143 109 ntBASIC4.67□□□□□ -1.66
CCDC168Q8NDH2 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC4.67□□□□□ -1.66
CCDC168Q8NDH2 LINC01047-201ENST00000415193 778 ntTSL 5 BASIC4.67□□□□□ -1.66
CCDC168Q8NDH2 AC004690.1-201ENST00000418216 328 ntBASIC4.67□□□□□ -1.66
CCDC168Q8NDH2 ARPP21-218ENST00000438071 1103 ntTSL 3 BASIC4.67□□□□□ -1.66
CCDC168Q8NDH2 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC4.67□□□□□ -1.66
CCDC168Q8NDH2 AP003469.1-202ENST00000521884 478 ntTSL 2 BASIC4.67□□□□□ -1.66
CCDC168Q8NDH2 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC4.67□□□□□ -1.66
CCDC168Q8NDH2 EDDM3DP-201ENST00000554692 434 ntBASIC4.67□□□□□ -1.66
CCDC168Q8NDH2 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC4.67□□□□□ -1.66
CCDC168Q8NDH2 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC4.67□□□□□ -1.66
CCDC168Q8NDH2 TEX41-238ENST00000604253 709 ntTSL 5 BASIC4.67□□□□□ -1.66
CCDC168Q8NDH2 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC4.67□□□□□ -1.66
CCDC168Q8NDH2 BRCA1-210ENST00000471181 5936 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CCDC168Q8NDH2 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC4.67□□□□□ -1.66
CCDC168Q8NDH2 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
CCDC168Q8NDH2 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CCDC168Q8NDH2 SPEF2-202ENST00000356031 5681 ntAPPRIS P2 TSL 1 (best) BASIC4.67□□□□□ -1.66
CCDC168Q8NDH2 PTPRO-208ENST00000542557 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
CCDC168Q8NDH2 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
CCDC168Q8NDH2 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
CCDC168Q8NDH2 GBA3-206ENST00000610628 2154 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
CCDC168Q8NDH2 CA1-222ENST00000523953 2785 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
CCDC168Q8NDH2 AMD1-203ENST00000368882 3059 ntTSL 2 BASIC4.67□□□□□ -1.66
CCDC168Q8NDH2 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
CCDC168Q8NDH2 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC4.66□□□□□ -1.66
CCDC168Q8NDH2 CDKAL1-204ENST00000613575 1673 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CCDC168Q8NDH2 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
CCDC168Q8NDH2 MIR133B-201ENST00000362210 119 ntBASIC4.66□□□□□ -1.66
CCDC168Q8NDH2 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CCDC168Q8NDH2 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC4.66□□□□□ -1.66
CCDC168Q8NDH2 AL078599.1-201ENST00000402075 293 ntBASIC4.66□□□□□ -1.66
CCDC168Q8NDH2 RPL7P11-201ENST00000437586 658 ntBASIC4.66□□□□□ -1.66
CCDC168Q8NDH2 TDGF1P1-201ENST00000445734 527 ntBASIC4.66□□□□□ -1.66
CCDC168Q8NDH2 AL022237.1-201ENST00000446663 358 ntBASIC4.66□□□□□ -1.66
CCDC168Q8NDH2 snoU13.20-201ENST00000459180 104 ntBASIC4.66□□□□□ -1.66
CCDC168Q8NDH2 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC4.66□□□□□ -1.66
CCDC168Q8NDH2 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC4.66□□□□□ -1.66
CCDC168Q8NDH2 MIR2117-201ENST00000516780 80 ntBASIC4.66□□□□□ -1.66
CCDC168Q8NDH2 RPL26P30-202ENST00000602923 645 ntBASIC4.66□□□□□ -1.66
CCDC168Q8NDH2 AC019193.2-201ENST00000610012 634 ntBASIC4.66□□□□□ -1.66
CCDC168Q8NDH2 E2F8-201ENST00000250024 3240 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
CCDC168Q8NDH2 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC4.66□□□□□ -1.66
CCDC168Q8NDH2 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
CCDC168Q8NDH2 PLCH1-AS1-201ENST00000475196 1308 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CCDC168Q8NDH2 AC022905.1-201ENST00000503430 3048 ntBASIC4.66□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 76.4 ms