Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 GOLGA6L22-204ENST00000622895 4178 ntAPPRIS P5 TSL 5 BASIC6.65□□□□□ -1.35
SYNPOQ8N3V7 DEFB132-201ENST00000382376 2121 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
SYNPOQ8N3V7 CPS1-203ENST00000430249 5698 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
SYNPOQ8N3V7 RRN3P1-201ENST00000514813 3645 ntTSL 2 BASIC6.65□□□□□ -1.35
SYNPOQ8N3V7 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
SYNPOQ8N3V7 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
SYNPOQ8N3V7 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC6.65□□□□□ -1.35
SYNPOQ8N3V7 HMBOX1-206ENST00000519047 1551 ntTSL 5 BASIC6.65□□□□□ -1.35
SYNPOQ8N3V7 NPL-212ENST00000614468 2376 ntTSL 5 BASIC6.65□□□□□ -1.35
SYNPOQ8N3V7 HSPD1P9-201ENST00000420325 1636 ntBASIC6.65□□□□□ -1.35
SYNPOQ8N3V7 MUC5AC-201ENST00000621226 17448 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.35
SYNPOQ8N3V7 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC6.65□□□□□ -1.35
SYNPOQ8N3V7 AP002004.1-203ENST00000531091 1768 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
SYNPOQ8N3V7 FAM161A-202ENST00000404929 3762 ntAPPRIS ALT2 TSL 1 (best) BASIC6.64□□□□□ -1.35
SYNPOQ8N3V7 ABLIM1-202ENST00000369252 7690 ntTSL 5 BASIC6.64□□□□□ -1.35
SYNPOQ8N3V7 OR8B8-202ENST00000642064 3914 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
SYNPOQ8N3V7 ZNF474-201ENST00000296600 1964 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
SYNPOQ8N3V7 LINC02008-201ENST00000470263 1951 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
SYNPOQ8N3V7 FASTKD1-204ENST00000453153 2967 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
SYNPOQ8N3V7 LINC00320-204ENST00000437238 2004 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
SYNPOQ8N3V7 CDK12-202ENST00000447079 8336 ntAPPRIS P3 TSL 1 (best) BASIC6.64□□□□□ -1.35
SYNPOQ8N3V7 GAPVD1-215ENST00000470056 8923 ntTSL 5 BASIC6.64□□□□□ -1.35
SYNPOQ8N3V7 ZRANB3-210ENST00000536680 6943 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
SYNPOQ8N3V7 SLCO1C1-207ENST00000540354 2529 ntTSL 2 BASIC6.64□□□□□ -1.35
SYNPOQ8N3V7 RNU4-28P-201ENST00000364739 141 ntBASIC6.64□□□□□ -1.35
SYNPOQ8N3V7 MIR320B1-201ENST00000390209 79 ntBASIC6.64□□□□□ -1.35
SYNPOQ8N3V7 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC6.64□□□□□ -1.35
SYNPOQ8N3V7 AL136310.1-201ENST00000404926 654 ntBASIC6.64□□□□□ -1.35
SYNPOQ8N3V7 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC6.64□□□□□ -1.35
SYNPOQ8N3V7 AL513175.2-201ENST00000422071 443 ntBASIC6.64□□□□□ -1.35
SYNPOQ8N3V7 SETP9-201ENST00000423837 832 ntBASIC6.64□□□□□ -1.35
SYNPOQ8N3V7 C1DP1-201ENST00000426049 402 ntBASIC6.64□□□□□ -1.35
SYNPOQ8N3V7 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC6.64□□□□□ -1.35
SYNPOQ8N3V7 IGLV3-4-201ENST00000432300 244 ntBASIC6.64□□□□□ -1.35
SYNPOQ8N3V7 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC6.64□□□□□ -1.35
SYNPOQ8N3V7 AC245452.2-201ENST00000435222 392 ntBASIC6.64□□□□□ -1.35
SYNPOQ8N3V7 BRWD1-IT1-201ENST00000435608 489 ntTSL 3 BASIC6.64□□□□□ -1.35
SYNPOQ8N3V7 PNKDP1-201ENST00000435914 430 ntBASIC6.64□□□□□ -1.35
SYNPOQ8N3V7 AL645936.1-201ENST00000441979 518 ntBASIC6.64□□□□□ -1.35
SYNPOQ8N3V7 PTENP1-201ENST00000447117 1215 ntBASIC6.64□□□□□ -1.35
SYNPOQ8N3V7 AC097463.1-201ENST00000447288 481 ntBASIC6.64□□□□□ -1.35
SYNPOQ8N3V7 PPIAP20-201ENST00000449839 135 ntBASIC6.64□□□□□ -1.35
SYNPOQ8N3V7 AC073409.1-201ENST00000451749 269 ntTSL 3 BASIC6.64□□□□□ -1.35
SYNPOQ8N3V7 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC6.64□□□□□ -1.35
SYNPOQ8N3V7 AC084754.1-201ENST00000463466 464 ntBASIC6.64□□□□□ -1.35
SYNPOQ8N3V7 AC117386.1-201ENST00000474444 606 ntTSL 4 BASIC6.64□□□□□ -1.35
SYNPOQ8N3V7 AC087672.1-201ENST00000479876 766 ntBASIC6.64□□□□□ -1.35
SYNPOQ8N3V7 AC069528.1-202ENST00000482888 637 ntBASIC6.64□□□□□ -1.35
SYNPOQ8N3V7 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC6.64□□□□□ -1.35
SYNPOQ8N3V7 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC6.64□□□□□ -1.35
SYNPOQ8N3V7 COX6C-209ENST00000523016 745 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
SYNPOQ8N3V7 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC6.64□□□□□ -1.35
SYNPOQ8N3V7 OSGEPL1-AS1-203ENST00000523895 567 ntTSL 4 BASIC6.64□□□□□ -1.35
SYNPOQ8N3V7 FAM66C-206ENST00000535567 724 ntTSL 5 BASIC6.64□□□□□ -1.35
SYNPOQ8N3V7 AC024224.2-201ENST00000544225 782 ntTSL 3 BASIC6.64□□□□□ -1.35
SYNPOQ8N3V7 AC090115.2-201ENST00000548060 883 ntBASIC6.64□□□□□ -1.35
SYNPOQ8N3V7 AC079793.1-201ENST00000553076 713 ntTSL 4 BASIC6.64□□□□□ -1.35
SYNPOQ8N3V7 DPPA3P2-201ENST00000553589 478 ntBASIC6.64□□□□□ -1.35
SYNPOQ8N3V7 AL591767.3-201ENST00000554632 525 ntBASIC6.64□□□□□ -1.35
SYNPOQ8N3V7 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC6.64□□□□□ -1.35
SYNPOQ8N3V7 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC6.64□□□□□ -1.35
SYNPOQ8N3V7 AC103740.1-202ENST00000558404 542 ntTSL 4 BASIC6.64□□□□□ -1.35
SYNPOQ8N3V7 AC137800.1-201ENST00000562976 573 ntTSL 4 BASIC6.64□□□□□ -1.35
SYNPOQ8N3V7 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC6.64□□□□□ -1.35
SYNPOQ8N3V7 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC6.64□□□□□ -1.35
SYNPOQ8N3V7 AC010320.2-201ENST00000593857 551 ntTSL 4 BASIC6.64□□□□□ -1.35
SYNPOQ8N3V7 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC6.64□□□□□ -1.35
SYNPOQ8N3V7 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC6.64□□□□□ -1.35
SYNPOQ8N3V7 LY86-AS1-206ENST00000607278 677 ntTSL 3 BASIC6.64□□□□□ -1.35
SYNPOQ8N3V7 STARD13-AS-232ENST00000609137 882 ntTSL 5 BASIC6.64□□□□□ -1.35
SYNPOQ8N3V7 Z98949.1-217ENST00000609275 994 ntTSL 5 BASIC6.64□□□□□ -1.35
SYNPOQ8N3V7 AC005277.2-201ENST00000617898 390 ntBASIC6.64□□□□□ -1.35
SYNPOQ8N3V7 AC021106.3-201ENST00000623925 531 ntBASIC6.64□□□□□ -1.35
SYNPOQ8N3V7 AL136359.1-201ENST00000625090 565 ntTSL 2 BASIC6.64□□□□□ -1.35
SYNPOQ8N3V7 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC6.64□□□□□ -1.35
SYNPOQ8N3V7 AL121594.5-201ENST00000631724 573 ntBASIC6.64□□□□□ -1.35
SYNPOQ8N3V7 AC073488.6-201ENST00000632293 754 ntBASIC6.64□□□□□ -1.35
SYNPOQ8N3V7 LINC02495-203ENST00000636704 242 ntBASIC6.64□□□□□ -1.35
SYNPOQ8N3V7 LINC01808-202ENST00000641680 1116 ntBASIC6.64□□□□□ -1.35
SYNPOQ8N3V7 BX649567.1-201ENST00000642071 1134 ntBASIC6.64□□□□□ -1.35
SYNPOQ8N3V7 EOGT-201ENST00000295571 4138 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
SYNPOQ8N3V7 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
SYNPOQ8N3V7 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
SYNPOQ8N3V7 LINC00624-201ENST00000619867 3088 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
SYNPOQ8N3V7 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC6.64□□□□□ -1.35
SYNPOQ8N3V7 KIAA0586-214ENST00000619416 8233 ntAPPRIS ALT2 TSL 1 (best) BASIC6.64□□□□□ -1.35
SYNPOQ8N3V7 RACGAP1P-201ENST00000550663 1879 ntBASIC6.64□□□□□ -1.35
SYNPOQ8N3V7 DNM1L-205ENST00000414834 4211 ntTSL 2 BASIC6.64□□□□□ -1.35
SYNPOQ8N3V7 NDC80-201ENST00000261597 2172 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
SYNPOQ8N3V7 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC6.64□□□□□ -1.35
SYNPOQ8N3V7 PCNX4-201ENST00000317623 17339 ntAPPRIS P3 TSL 5 BASIC6.64□□□□□ -1.35
SYNPOQ8N3V7 ERVW-1-202ENST00000603053 2763 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
SYNPOQ8N3V7 KLHL5-205ENST00000508137 2926 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
SYNPOQ8N3V7 AP000866.6-201ENST00000638898 3579 ntBASIC6.63□□□□□ -1.35
SYNPOQ8N3V7 MEF2C-202ENST00000424173 6336 ntAPPRIS P3 TSL 1 (best) BASIC6.63□□□□□ -1.35
SYNPOQ8N3V7 POLR1A-201ENST00000263857 12749 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
SYNPOQ8N3V7 UNC79-203ENST00000553484 9100 ntTSL 5 BASIC6.63□□□□□ -1.35
SYNPOQ8N3V7 STS-201ENST00000217961 6521 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
SYNPOQ8N3V7 BCL2L14-201ENST00000266434 2039 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
SYNPOQ8N3V7 ZNF490-201ENST00000311437 4237 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms