Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC6.43□□□□□ -1.38
TRIM48Q8IWZ4 AC245052.7-201ENST00000601161 359 ntBASIC6.43□□□□□ -1.38
TRIM48Q8IWZ4 AC011500.1-201ENST00000601963 469 ntBASIC6.43□□□□□ -1.38
TRIM48Q8IWZ4 AC068790.6-201ENST00000602558 258 ntBASIC6.43□□□□□ -1.38
TRIM48Q8IWZ4 AC012368.3-201ENST00000604190 219 ntBASIC6.43□□□□□ -1.38
TRIM48Q8IWZ4 AC105129.3-201ENST00000605455 485 ntBASIC6.43□□□□□ -1.38
TRIM48Q8IWZ4 AC135507.1-201ENST00000607214 561 ntBASIC6.43□□□□□ -1.38
TRIM48Q8IWZ4 AP003392.5-201ENST00000607857 415 ntBASIC6.43□□□□□ -1.38
TRIM48Q8IWZ4 AL353600.1-201ENST00000608148 251 ntBASIC6.43□□□□□ -1.38
TRIM48Q8IWZ4 Metazoa_SRP.66-201ENST00000615609 282 ntBASIC6.43□□□□□ -1.38
TRIM48Q8IWZ4 AC018659.2-201ENST00000624690 715 ntBASIC6.43□□□□□ -1.38
TRIM48Q8IWZ4 TEX41-293ENST00000630451 690 ntTSL 5 BASIC6.43□□□□□ -1.38
TRIM48Q8IWZ4 ATM-229ENST00000639953 587 ntTSL 5 BASIC6.43□□□□□ -1.38
TRIM48Q8IWZ4 LINC01138-208ENST00000639159 1521 ntTSL 5 BASIC6.43□□□□□ -1.38
TRIM48Q8IWZ4 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC6.43□□□□□ -1.38
TRIM48Q8IWZ4 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC6.43□□□□□ -1.38
TRIM48Q8IWZ4 DPYD-202ENST00000370192 4412 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
TRIM48Q8IWZ4 TLR10-204ENST00000506111 3462 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
TRIM48Q8IWZ4 LINC01297-204ENST00000621052 4222 ntTSL 5 BASIC6.43□□□□□ -1.38
TRIM48Q8IWZ4 AL022323.4-201ENST00000623980 13120 ntBASIC6.43□□□□□ -1.38
TRIM48Q8IWZ4 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC6.43□□□□□ -1.38
TRIM48Q8IWZ4 AC110597.1-201ENST00000562669 3176 ntBASIC6.43□□□□□ -1.38
TRIM48Q8IWZ4 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC6.42□□□□□ -1.38
TRIM48Q8IWZ4 ZNF793-202ENST00000542455 4073 ntTSL 5 BASIC6.42□□□□□ -1.38
TRIM48Q8IWZ4 ZNF571-205ENST00000590751 1700 ntTSL 2 BASIC6.42□□□□□ -1.38
TRIM48Q8IWZ4 ATF7IP2-203ENST00000396559 3641 ntTSL 2 BASIC6.42□□□□□ -1.38
TRIM48Q8IWZ4 DNAH17-201ENST00000389840 13723 ntAPPRIS P5 TSL 5 BASIC6.42□□□□□ -1.38
TRIM48Q8IWZ4 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
TRIM48Q8IWZ4 AF064860.2-201ENST00000457325 1542 ntTSL 3 BASIC6.42□□□□□ -1.38
TRIM48Q8IWZ4 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
TRIM48Q8IWZ4 OR4M1-201ENST00000315957 1116 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
TRIM48Q8IWZ4 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC6.42□□□□□ -1.38
TRIM48Q8IWZ4 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC6.42□□□□□ -1.38
TRIM48Q8IWZ4 RN7SKP250-201ENST00000363924 321 ntBASIC6.42□□□□□ -1.38
TRIM48Q8IWZ4 ECHDC1-202ENST00000368289 909 ntTSL 5 BASIC6.42□□□□□ -1.38
TRIM48Q8IWZ4 PRPS1-202ENST00000372419 628 ntTSL 2 BASIC6.42□□□□□ -1.38
TRIM48Q8IWZ4 VIM2P-201ENST00000402383 1294 ntBASIC6.42□□□□□ -1.38
TRIM48Q8IWZ4 TEX41-202ENST00000414256 604 ntTSL 5 BASIC6.42□□□□□ -1.38
TRIM48Q8IWZ4 BTF3P9-201ENST00000418784 283 ntBASIC6.42□□□□□ -1.38
TRIM48Q8IWZ4 SLC9B1P4-201ENST00000421957 1288 ntBASIC6.42□□□□□ -1.38
TRIM48Q8IWZ4 AL050344.1-201ENST00000424084 490 ntTSL 3 BASIC6.42□□□□□ -1.38
TRIM48Q8IWZ4 C1DP1-201ENST00000426049 402 ntBASIC6.42□□□□□ -1.38
TRIM48Q8IWZ4 Z68868.1-201ENST00000429048 544 ntBASIC6.42□□□□□ -1.38
TRIM48Q8IWZ4 AL158832.1-201ENST00000429661 406 ntTSL 3 BASIC6.42□□□□□ -1.38
TRIM48Q8IWZ4 LINC00328-2P-201ENST00000436585 219 ntBASIC6.42□□□□□ -1.38
TRIM48Q8IWZ4 AC092393.1-201ENST00000439625 742 ntBASIC6.42□□□□□ -1.38
TRIM48Q8IWZ4 MTND2P19-201ENST00000449129 1012 ntBASIC6.42□□□□□ -1.38
TRIM48Q8IWZ4 AL162427.1-201ENST00000450399 439 ntTSL 5 BASIC6.42□□□□□ -1.38
TRIM48Q8IWZ4 RPL7P32-201ENST00000457119 744 ntBASIC6.42□□□□□ -1.38
TRIM48Q8IWZ4 AC092754.2-201ENST00000463506 460 ntBASIC6.42□□□□□ -1.38
TRIM48Q8IWZ4 MTND3P7-201ENST00000474435 343 ntBASIC6.42□□□□□ -1.38
TRIM48Q8IWZ4 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
TRIM48Q8IWZ4 AC245088.1-201ENST00000486508 384 ntTSL 3 BASIC6.42□□□□□ -1.38
TRIM48Q8IWZ4 CREM-242ENST00000490511 469 ntTSL 2 BASIC6.42□□□□□ -1.38
TRIM48Q8IWZ4 RPL24-206ENST00000495401 478 ntTSL 2 BASIC6.42□□□□□ -1.38
TRIM48Q8IWZ4 AC093890.1-201ENST00000502554 540 ntBASIC6.42□□□□□ -1.38
TRIM48Q8IWZ4 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC6.42□□□□□ -1.38
TRIM48Q8IWZ4 MTCYBP37-201ENST00000510642 1133 ntBASIC6.42□□□□□ -1.38
TRIM48Q8IWZ4 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC6.42□□□□□ -1.38
TRIM48Q8IWZ4 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC6.42□□□□□ -1.38
TRIM48Q8IWZ4 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
TRIM48Q8IWZ4 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC6.42□□□□□ -1.38
TRIM48Q8IWZ4 RPL3P13-201ENST00000550415 216 ntBASIC6.42□□□□□ -1.38
TRIM48Q8IWZ4 AC084824.1-201ENST00000550917 1005 ntBASIC6.42□□□□□ -1.38
TRIM48Q8IWZ4 AC027807.1-201ENST00000559921 996 ntBASIC6.42□□□□□ -1.38
TRIM48Q8IWZ4 AC009852.1-201ENST00000564058 465 ntTSL 3 BASIC6.42□□□□□ -1.38
TRIM48Q8IWZ4 AC018558.5-201ENST00000565840 952 ntBASIC6.42□□□□□ -1.38
TRIM48Q8IWZ4 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC6.42□□□□□ -1.38
TRIM48Q8IWZ4 LINC01916-201ENST00000582028 559 ntTSL 4 BASIC6.42□□□□□ -1.38
TRIM48Q8IWZ4 AC006262.3-201ENST00000597337 258 ntTSL 3 BASIC6.42□□□□□ -1.38
TRIM48Q8IWZ4 AC016877.3-201ENST00000606778 504 ntBASIC6.42□□□□□ -1.38
TRIM48Q8IWZ4 AC009237.15-201ENST00000610252 501 ntBASIC6.42□□□□□ -1.38
TRIM48Q8IWZ4 MIR6780B-201ENST00000610307 79 ntBASIC6.42□□□□□ -1.38
TRIM48Q8IWZ4 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
TRIM48Q8IWZ4 AL157770.1-201ENST00000623049 439 ntBASIC6.42□□□□□ -1.38
TRIM48Q8IWZ4 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC6.42□□□□□ -1.38
TRIM48Q8IWZ4 OR5D13-201ENST00000623930 945 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
TRIM48Q8IWZ4 AC073530.2-201ENST00000623987 261 ntBASIC6.42□□□□□ -1.38
TRIM48Q8IWZ4 AC007490.1-201ENST00000624321 703 ntBASIC6.42□□□□□ -1.38
TRIM48Q8IWZ4 SNX18P10-201ENST00000625014 519 ntBASIC6.42□□□□□ -1.38
TRIM48Q8IWZ4 LINC00836-201ENST00000625325 582 ntTSL 4 BASIC6.42□□□□□ -1.38
TRIM48Q8IWZ4 LINC01440-210ENST00000629744 541 ntTSL 5 BASIC6.42□□□□□ -1.38
TRIM48Q8IWZ4 AL596275.2-207ENST00000641188 675 ntBASIC6.42□□□□□ -1.38
TRIM48Q8IWZ4 TCF4-225ENST00000564999 3590 ntAPPRIS P3 TSL 5 BASIC6.42□□□□□ -1.38
TRIM48Q8IWZ4 OXCT1-206ENST00000512084 1593 ntTSL 2 BASIC6.42□□□□□ -1.38
TRIM48Q8IWZ4 AMD1-203ENST00000368882 3059 ntTSL 2 BASIC6.42□□□□□ -1.38
TRIM48Q8IWZ4 PTPN2-212ENST00000591497 3390 ntTSL 5 BASIC6.42□□□□□ -1.38
TRIM48Q8IWZ4 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
TRIM48Q8IWZ4 ARPP21-204ENST00000412048 2506 ntTSL 2 BASIC6.42□□□□□ -1.38
TRIM48Q8IWZ4 MDM4-217ENST00000621032 5592 ntTSL 2 BASIC6.42□□□□□ -1.38
TRIM48Q8IWZ4 SEMA3A-204ENST00000436949 2550 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
TRIM48Q8IWZ4 SPHKAP-201ENST00000344657 6804 ntAPPRIS P3 TSL 1 (best) BASIC6.42□□□□□ -1.38
TRIM48Q8IWZ4 AL136317.2-201ENST00000619851 2254 ntTSL 2 BASIC6.42□□□□□ -1.38
TRIM48Q8IWZ4 AC093536.2-201ENST00000565257 1406 ntBASIC6.42□□□□□ -1.38
TRIM48Q8IWZ4 VTCN1-207ENST00000539893 2719 ntTSL 2 BASIC6.41□□□□□ -1.38
TRIM48Q8IWZ4 NRP1-205ENST00000374823 3737 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
TRIM48Q8IWZ4 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
TRIM48Q8IWZ4 INTS4-209ENST00000534064 3156 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
TRIM48Q8IWZ4 NUDT13-206ENST00000537969 2151 ntTSL 2 BASIC6.41□□□□□ -1.38
TRIM48Q8IWZ4 PHC3-203ENST00000467570 2595 ntTSL 2 BASIC6.41□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 86.1 ms