Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 RNU6-831P-201ENST00000384548 107 ntBASIC8.64□□□□□ -1.03
VARS2Q5ST30 RPS7-204ENST00000407445 833 ntTSL 2 BASIC8.64□□□□□ -1.03
VARS2Q5ST30 SPA17P1-201ENST00000416656 452 ntBASIC8.64□□□□□ -1.03
VARS2Q5ST30 PIGX-204ENST00000421265 677 ntTSL 2 BASIC8.64□□□□□ -1.03
VARS2Q5ST30 AL358394.1-201ENST00000422807 535 ntTSL 2 BASIC8.64□□□□□ -1.03
VARS2Q5ST30 OR51AB1P-201ENST00000429046 620 ntBASIC8.64□□□□□ -1.03
VARS2Q5ST30 CEP57L1P1-201ENST00000430943 1201 ntBASIC8.64□□□□□ -1.03
VARS2Q5ST30 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC8.64□□□□□ -1.03
VARS2Q5ST30 PPP1R8P1-201ENST00000452549 1044 ntBASIC8.64□□□□□ -1.03
VARS2Q5ST30 CALM1P2-201ENST00000452941 448 ntBASIC8.64□□□□□ -1.03
VARS2Q5ST30 AL157400.2-201ENST00000454174 563 ntTSL 2 BASIC8.64□□□□□ -1.03
VARS2Q5ST30 LINC00652-202ENST00000454749 963 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
VARS2Q5ST30 AL035660.2-201ENST00000461248 556 ntTSL 2 BASIC8.64□□□□□ -1.03
VARS2Q5ST30 RPL38P4-201ENST00000502376 214 ntBASIC8.64□□□□□ -1.03
VARS2Q5ST30 AC097460.2-201ENST00000511857 741 ntBASIC8.64□□□□□ -1.03
VARS2Q5ST30 AC107959.3-202ENST00000523806 450 ntTSL 5 BASIC8.64□□□□□ -1.03
VARS2Q5ST30 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC8.64□□□□□ -1.03
VARS2Q5ST30 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC8.64□□□□□ -1.03
VARS2Q5ST30 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC8.64□□□□□ -1.03
VARS2Q5ST30 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC8.64□□□□□ -1.03
VARS2Q5ST30 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC8.64□□□□□ -1.03
VARS2Q5ST30 MIR3133-201ENST00000583157 78 ntBASIC8.64□□□□□ -1.03
VARS2Q5ST30 MIR3159-201ENST00000584572 74 ntBASIC8.64□□□□□ -1.03
VARS2Q5ST30 AC011483.2-201ENST00000594512 536 ntTSL 4 BASIC8.64□□□□□ -1.03
VARS2Q5ST30 Metazoa_SRP.189-201ENST00000614219 303 ntBASIC8.64□□□□□ -1.03
VARS2Q5ST30 AC002090.1-201ENST00000625000 2138 ntBASIC8.64□□□□□ -1.03
VARS2Q5ST30 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC8.64□□□□□ -1.03
VARS2Q5ST30 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC8.64□□□□□ -1.03
VARS2Q5ST30 KRT7-214ENST00000638501 398 ntTSL 5 BASIC8.64□□□□□ -1.03
VARS2Q5ST30 CSRNP3-203ENST00000409420 2545 ntTSL 5 BASIC8.64□□□□□ -1.03
VARS2Q5ST30 SLC16A12-201ENST00000371790 4617 ntAPPRIS P1 TSL 2 BASIC8.64□□□□□ -1.03
VARS2Q5ST30 MAPK9-213ENST00000539014 1668 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
VARS2Q5ST30 NBPF12-202ENST00000579935 5035 ntAPPRIS ALT2 TSL 5 BASIC8.64□□□□□ -1.03
VARS2Q5ST30 ARMC3-202ENST00000376528 3258 ntTSL 2 BASIC8.64□□□□□ -1.03
VARS2Q5ST30 WDR7-213ENST00000615645 5257 ntTSL 5 BASIC8.64□□□□□ -1.03
VARS2Q5ST30 PTBP3-205ENST00000374257 7240 ntAPPRIS ALT1 TSL 2 BASIC8.64□□□□□ -1.03
VARS2Q5ST30 SLC7A8-206ENST00000469263 3557 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
VARS2Q5ST30 ARMC3-204ENST00000409983 2779 ntAPPRIS ALT2 TSL 2 BASIC8.64□□□□□ -1.03
VARS2Q5ST30 R3HDM2P1-201ENST00000505381 1960 ntBASIC8.64□□□□□ -1.03
VARS2Q5ST30 PIGP-202ENST00000360525 6998 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
VARS2Q5ST30 HMGB4-203ENST00000519684 2343 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
VARS2Q5ST30 GNPAT-201ENST00000366647 2643 ntAPPRIS P2 TSL 1 (best) BASIC8.64□□□□□ -1.03
VARS2Q5ST30 DNAH11-202ENST00000409508 14167 ntAPPRIS P2 TSL 5 BASIC8.64□□□□□ -1.03
VARS2Q5ST30 ZNF716-201ENST00000420713 5197 ntAPPRIS P1 TSL 4 BASIC8.64□□□□□ -1.03
VARS2Q5ST30 DLG1-208ENST00000419354 3994 ntAPPRIS ALT1 TSL 1 (best) BASIC8.63□□□□□ -1.03
VARS2Q5ST30 VN2R3P-201ENST00000422626 1412 ntBASIC8.63□□□□□ -1.03
VARS2Q5ST30 HMSD-201ENST00000408945 2101 ntAPPRIS P1 TSL 3 BASIC8.63□□□□□ -1.03
VARS2Q5ST30 VIT-202ENST00000379242 2810 ntAPPRIS P3 TSL 2 BASIC8.63□□□□□ -1.03
VARS2Q5ST30 ACACB-203ENST00000377854 6588 ntTSL 5 BASIC8.63□□□□□ -1.03
VARS2Q5ST30 AC119744.1-201ENST00000454746 1715 ntBASIC8.63□□□□□ -1.03
VARS2Q5ST30 AC015689.2-201ENST00000528172 1738 ntBASIC8.63□□□□□ -1.03
VARS2Q5ST30 TRPM1-202ENST00000397795 5687 ntAPPRIS P3 TSL 1 (best) BASIC8.63□□□□□ -1.03
VARS2Q5ST30 CHD7-201ENST00000423902 11568 ntAPPRIS P1 TSL 5 BASIC8.63□□□□□ -1.03
VARS2Q5ST30 CLIP1-218ENST00000545889 4633 ntTSL 5 BASIC8.63□□□□□ -1.03
VARS2Q5ST30 PCDH19-203ENST00000420881 7936 ntAPPRIS ALT2 TSL 1 (best) BASIC8.63□□□□□ -1.03
VARS2Q5ST30 CCDC162P-214ENST00000640755 1958 ntTSL 5 BASIC8.63□□□□□ -1.03
VARS2Q5ST30 GABRB3-216ENST00000628124 5581 ntTSL 2 BASIC8.63□□□□□ -1.03
VARS2Q5ST30 ZNF252P-201ENST00000426361 5210 ntTSL 4 BASIC8.63□□□□□ -1.03
VARS2Q5ST30 ASNSP6-201ENST00000592770 1618 ntBASIC8.63□□□□□ -1.03
VARS2Q5ST30 FCGR3B-208ENST00000613418 2251 ntTSL 5 BASIC8.63□□□□□ -1.03
VARS2Q5ST30 CU633906.2-201ENST00000624576 2257 ntTSL 5 BASIC8.63□□□□□ -1.03
VARS2Q5ST30 TMCC1-202ENST00000426664 5484 ntTSL 5 BASIC8.63□□□□□ -1.03
VARS2Q5ST30 KCNIP2-202ENST00000343195 663 ntAPPRIS P3 TSL 1 (best) BASIC8.63□□□□□ -1.03
VARS2Q5ST30 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC8.63□□□□□ -1.03
VARS2Q5ST30 Y_RNA.5-201ENST00000362334 102 ntBASIC8.63□□□□□ -1.03
VARS2Q5ST30 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC8.63□□□□□ -1.03
VARS2Q5ST30 RNU6-432P-201ENST00000384196 109 ntBASIC8.63□□□□□ -1.03
VARS2Q5ST30 RNU2-42P-201ENST00000410697 113 ntBASIC8.63□□□□□ -1.03
VARS2Q5ST30 MTATP6P18-201ENST00000417994 673 ntBASIC8.63□□□□□ -1.03
VARS2Q5ST30 AP000997.1-201ENST00000424313 479 ntTSL 3 BASIC8.63□□□□□ -1.03
VARS2Q5ST30 RPL34P6-201ENST00000432390 345 ntBASIC8.63□□□□□ -1.03
VARS2Q5ST30 LINC01852-201ENST00000434223 967 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
VARS2Q5ST30 LINC01015-204ENST00000445296 399 ntTSL 3 BASIC8.63□□□□□ -1.03
VARS2Q5ST30 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC8.63□□□□□ -1.03
VARS2Q5ST30 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC8.63□□□□□ -1.03
VARS2Q5ST30 TVP23CP1-201ENST00000450317 639 ntBASIC8.63□□□□□ -1.03
VARS2Q5ST30 RPL12P40-201ENST00000467028 488 ntBASIC8.63□□□□□ -1.03
VARS2Q5ST30 RPS4XP17-201ENST00000479057 754 ntBASIC8.63□□□□□ -1.03
VARS2Q5ST30 AC099521.1-201ENST00000482557 334 ntBASIC8.63□□□□□ -1.03
VARS2Q5ST30 RPL7P38-201ENST00000488396 739 ntBASIC8.63□□□□□ -1.03
VARS2Q5ST30 AC091885.1-201ENST00000506658 268 ntBASIC8.63□□□□□ -1.03
VARS2Q5ST30 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC8.63□□□□□ -1.03
VARS2Q5ST30 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC8.63□□□□□ -1.03
VARS2Q5ST30 AC011352.2-201ENST00000514574 1016 ntBASIC8.63□□□□□ -1.03
VARS2Q5ST30 AC087854.1-201ENST00000519706 414 ntBASIC8.63□□□□□ -1.03
VARS2Q5ST30 AC092818.1-201ENST00000523411 639 ntTSL 3 BASIC8.63□□□□□ -1.03
VARS2Q5ST30 KCTD21-AS1-204ENST00000528468 554 ntTSL 4 BASIC8.63□□□□□ -1.03
VARS2Q5ST30 OR5B10P-201ENST00000532869 642 ntBASIC8.63□□□□□ -1.03
VARS2Q5ST30 AC005833.3-202ENST00000544741 770 ntAPPRIS P1 TSL 3 BASIC8.63□□□□□ -1.03
VARS2Q5ST30 PSMA6-204ENST00000553809 879 ntAPPRIS ALT1 TSL 3 BASIC8.63□□□□□ -1.03
VARS2Q5ST30 AC122685.1-202ENST00000556750 555 ntTSL 2 BASIC8.63□□□□□ -1.03
VARS2Q5ST30 ATP5F1P7-201ENST00000567330 760 ntBASIC8.63□□□□□ -1.03
VARS2Q5ST30 AL133297.1-201ENST00000568149 404 ntTSL 2 BASIC8.63□□□□□ -1.03
VARS2Q5ST30 ZNF174-204ENST00000572544 1002 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
VARS2Q5ST30 AC113195.1-201ENST00000579952 141 ntBASIC8.63□□□□□ -1.03
VARS2Q5ST30 AC011453.2-201ENST00000603737 729 ntBASIC8.63□□□□□ -1.03
VARS2Q5ST30 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC8.63□□□□□ -1.03
VARS2Q5ST30 AL732618.1-201ENST00000623251 301 ntBASIC8.63□□□□□ -1.03
VARS2Q5ST30 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC8.63□□□□□ -1.03
VARS2Q5ST30 AC026950.2-201ENST00000633456 470 ntTSL 3 BASIC8.63□□□□□ -1.03
Retrieved 100 of 98,524 protein–RNA pairs in 111.2 ms