Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 GAPDHP71-201ENST00000511530 1003 ntBASIC5.18□□□□□ -1.58
RFX4Q33E94 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC5.18□□□□□ -1.58
RFX4Q33E94 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC5.18□□□□□ -1.58
RFX4Q33E94 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC5.18□□□□□ -1.58
RFX4Q33E94 RPA2P1-201ENST00000556557 721 ntBASIC5.18□□□□□ -1.58
RFX4Q33E94 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC5.18□□□□□ -1.58
RFX4Q33E94 AC084782.2-201ENST00000561934 839 ntTSL 3 BASIC5.18□□□□□ -1.58
RFX4Q33E94 AC243756.1-201ENST00000584068 660 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
RFX4Q33E94 AC008543.3-201ENST00000586983 491 ntTSL 5 BASIC5.18□□□□□ -1.58
RFX4Q33E94 AC090236.2-201ENST00000587933 1101 ntBASIC5.18□□□□□ -1.58
RFX4Q33E94 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC5.18□□□□□ -1.58
RFX4Q33E94 APOC2-205ENST00000592257 444 ntTSL 3 BASIC5.18□□□□□ -1.58
RFX4Q33E94 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC5.18□□□□□ -1.58
RFX4Q33E94 AC083798.2-201ENST00000608756 1152 ntTSL 4 BASIC5.18□□□□□ -1.58
RFX4Q33E94 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC5.18□□□□□ -1.58
RFX4Q33E94 AC245014.3-201ENST00000618589 347 ntBASIC5.18□□□□□ -1.58
RFX4Q33E94 AC111152.1-202ENST00000635848 339 ntBASIC5.18□□□□□ -1.58
RFX4Q33E94 AC073869.7-201ENST00000640874 297 ntBASIC5.18□□□□□ -1.58
RFX4Q33E94 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC5.18□□□□□ -1.58
RFX4Q33E94 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
RFX4Q33E94 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC5.18□□□□□ -1.58
RFX4Q33E94 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC5.18□□□□□ -1.58
RFX4Q33E94 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC5.18□□□□□ -1.58
RFX4Q33E94 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC5.18□□□□□ -1.58
RFX4Q33E94 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
RFX4Q33E94 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
RFX4Q33E94 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC5.18□□□□□ -1.58
RFX4Q33E94 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
RFX4Q33E94 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC5.17□□□□□ -1.58
RFX4Q33E94 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
RFX4Q33E94 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC5.17□□□□□ -1.58
RFX4Q33E94 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
RFX4Q33E94 AC018809.2-201ENST00000602436 3823 ntBASIC5.17□□□□□ -1.58
RFX4Q33E94 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC5.17□□□□□ -1.58
RFX4Q33E94 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC5.17□□□□□ -1.58
RFX4Q33E94 ADAM5-202ENST00000399789 1942 ntBASIC5.17□□□□□ -1.58
RFX4Q33E94 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
RFX4Q33E94 MATR3-203ENST00000502499 2664 ntTSL 5 BASIC5.17□□□□□ -1.58
RFX4Q33E94 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
RFX4Q33E94 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
RFX4Q33E94 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
RFX4Q33E94 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
RFX4Q33E94 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
RFX4Q33E94 AC017079.1-201ENST00000333650 415 ntBASIC5.17□□□□□ -1.58
RFX4Q33E94 OR1L6-202ENST00000373684 1044 ntBASIC5.17□□□□□ -1.58
RFX4Q33E94 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
RFX4Q33E94 MIR130B-202ENST00000385018 82 ntBASIC5.17□□□□□ -1.58
RFX4Q33E94 PPIAP9-201ENST00000403866 498 ntBASIC5.17□□□□□ -1.58
RFX4Q33E94 GCNT1P4-201ENST00000404096 329 ntBASIC5.17□□□□□ -1.58
RFX4Q33E94 AC002511.2-201ENST00000413796 450 ntTSL 2 BASIC5.17□□□□□ -1.58
RFX4Q33E94 NIFKP3-201ENST00000417799 865 ntBASIC5.17□□□□□ -1.58
RFX4Q33E94 AL049712.1-201ENST00000418739 872 ntTSL 3 BASIC5.17□□□□□ -1.58
RFX4Q33E94 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC5.17□□□□□ -1.58
RFX4Q33E94 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
RFX4Q33E94 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC5.17□□□□□ -1.58
RFX4Q33E94 LINC00383-201ENST00000433664 817 ntTSL 3 BASIC5.17□□□□□ -1.58
RFX4Q33E94 GAPDHP48-201ENST00000436626 961 ntBASIC5.17□□□□□ -1.58
RFX4Q33E94 AC012512.1-201ENST00000446594 718 ntBASIC5.17□□□□□ -1.58
RFX4Q33E94 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
RFX4Q33E94 AC090804.1-201ENST00000448870 490 ntBASIC5.17□□□□□ -1.58
RFX4Q33E94 CFL1P4-201ENST00000451536 498 ntBASIC5.17□□□□□ -1.58
RFX4Q33E94 PRPF38AP1-201ENST00000451976 933 ntBASIC5.17□□□□□ -1.58
RFX4Q33E94 RN7SL72P-201ENST00000460697 269 ntBASIC5.17□□□□□ -1.58
RFX4Q33E94 AC114982.2-201ENST00000461396 358 ntBASIC5.17□□□□□ -1.58
RFX4Q33E94 RPS4XP12-201ENST00000461747 709 ntBASIC5.17□□□□□ -1.58
RFX4Q33E94 AC023424.1-201ENST00000496058 459 ntBASIC5.17□□□□□ -1.58
RFX4Q33E94 AC112496.1-201ENST00000497961 562 ntTSL 5 BASIC5.17□□□□□ -1.58
RFX4Q33E94 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC5.17□□□□□ -1.58
RFX4Q33E94 AC091874.2-201ENST00000505889 720 ntBASIC5.17□□□□□ -1.58
RFX4Q33E94 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC5.17□□□□□ -1.58
RFX4Q33E94 SETP21-201ENST00000514799 892 ntBASIC5.17□□□□□ -1.58
RFX4Q33E94 RN7SKP35-201ENST00000517210 151 ntBASIC5.17□□□□□ -1.58
RFX4Q33E94 IGKV3D-25-201ENST00000519599 235 ntBASIC5.17□□□□□ -1.58
RFX4Q33E94 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC5.17□□□□□ -1.58
RFX4Q33E94 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC5.17□□□□□ -1.58
RFX4Q33E94 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC5.17□□□□□ -1.58
RFX4Q33E94 A2MP1-201ENST00000543404 1201 ntTSL 5 BASIC5.17□□□□□ -1.58
RFX4Q33E94 AP000593.3-201ENST00000546065 578 ntTSL 2 BASIC5.17□□□□□ -1.58
RFX4Q33E94 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC5.17□□□□□ -1.58
RFX4Q33E94 LSM3P2-201ENST00000551246 273 ntBASIC5.17□□□□□ -1.58
RFX4Q33E94 C15orf41-204ENST00000562877 764 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
RFX4Q33E94 AC096996.1-201ENST00000563813 325 ntBASIC5.17□□□□□ -1.58
RFX4Q33E94 AC145285.4-201ENST00000568183 540 ntTSL 3 BASIC5.17□□□□□ -1.58
RFX4Q33E94 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC5.17□□□□□ -1.58
RFX4Q33E94 MIR4776-2-201ENST00000580204 80 ntBASIC5.17□□□□□ -1.58
RFX4Q33E94 MIR4260-201ENST00000583107 67 ntBASIC5.17□□□□□ -1.58
RFX4Q33E94 AC011468.3-201ENST00000597886 332 ntTSL 3 BASIC5.17□□□□□ -1.58
RFX4Q33E94 AC009237.13-201ENST00000603193 276 ntBASIC5.17□□□□□ -1.58
RFX4Q33E94 AC124916.2-201ENST00000604416 224 ntBASIC5.17□□□□□ -1.58
RFX4Q33E94 AC104836.2-201ENST00000609675 1293 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
RFX4Q33E94 AL365181.4-201ENST00000609800 547 ntBASIC5.17□□□□□ -1.58
RFX4Q33E94 Z99755.2-201ENST00000610215 364 ntTSL 3 BASIC5.17□□□□□ -1.58
RFX4Q33E94 AC090607.5-201ENST00000615692 224 ntBASIC5.17□□□□□ -1.58
RFX4Q33E94 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
RFX4Q33E94 TEX41-293ENST00000630451 690 ntTSL 5 BASIC5.17□□□□□ -1.58
RFX4Q33E94 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC5.17□□□□□ -1.58
RFX4Q33E94 LINC02341-201ENST00000637043 824 ntTSL 3 BASIC5.17□□□□□ -1.58
RFX4Q33E94 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
RFX4Q33E94 AC007842.1-201ENST00000597336 2039 ntBASIC5.17□□□□□ -1.58
RFX4Q33E94 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC5.17□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 91.5 ms