Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 RBMY2JP-201ENST00000425544 1059 ntBASIC6.94□□□□□ -1.3
PCDH1Q08174 USP9YP18-201ENST00000425912 695 ntBASIC6.94□□□□□ -1.3
PCDH1Q08174 CYP4F32P-201ENST00000426492 504 ntBASIC6.94□□□□□ -1.3
PCDH1Q08174 DLEU1-AS1-201ENST00000428276 731 ntTSL 3 BASIC6.94□□□□□ -1.3
PCDH1Q08174 LINC00160-201ENST00000430635 693 ntTSL 5 BASIC6.94□□□□□ -1.3
PCDH1Q08174 AL035691.1-201ENST00000434562 595 ntTSL 3 BASIC6.94□□□□□ -1.3
PCDH1Q08174 LINC01747-201ENST00000437696 1067 ntTSL 2 BASIC6.94□□□□□ -1.3
PCDH1Q08174 LINC00570-203ENST00000437795 490 ntTSL 3 BASIC6.94□□□□□ -1.3
PCDH1Q08174 FDPSP8-201ENST00000438304 1089 ntBASIC6.94□□□□□ -1.3
PCDH1Q08174 PA2G4P6-201ENST00000438325 1197 ntBASIC6.94□□□□□ -1.3
PCDH1Q08174 GHRL-210ENST00000449238 440 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
PCDH1Q08174 OR6C5P-201ENST00000452388 923 ntBASIC6.94□□□□□ -1.3
PCDH1Q08174 CALM1P2-201ENST00000452941 448 ntBASIC6.94□□□□□ -1.3
PCDH1Q08174 RFC5P1-201ENST00000454419 874 ntBASIC6.94□□□□□ -1.3
PCDH1Q08174 MTCO3P11-201ENST00000455103 774 ntBASIC6.94□□□□□ -1.3
PCDH1Q08174 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC6.94□□□□□ -1.3
PCDH1Q08174 RN7SL392P-201ENST00000473024 299 ntBASIC6.94□□□□□ -1.3
PCDH1Q08174 AC012158.1-202ENST00000482431 1132 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
PCDH1Q08174 RN7SL647P-201ENST00000485429 300 ntBASIC6.94□□□□□ -1.3
PCDH1Q08174 CYB5A-204ENST00000494131 776 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
PCDH1Q08174 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC6.94□□□□□ -1.3
PCDH1Q08174 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC6.94□□□□□ -1.3
PCDH1Q08174 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC6.94□□□□□ -1.3
PCDH1Q08174 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC6.94□□□□□ -1.3
PCDH1Q08174 IGBP1P5-201ENST00000507524 1000 ntBASIC6.94□□□□□ -1.3
PCDH1Q08174 CHCHD2P7-201ENST00000508008 452 ntBASIC6.94□□□□□ -1.3
PCDH1Q08174 LINC01085-203ENST00000511195 326 ntBASIC6.94□□□□□ -1.3
PCDH1Q08174 OSTC-204ENST00000512478 663 ntTSL 5 BASIC6.94□□□□□ -1.3
PCDH1Q08174 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC6.94□□□□□ -1.3
PCDH1Q08174 AC005699.1-203ENST00000515286 688 ntTSL 3 BASIC6.94□□□□□ -1.3
PCDH1Q08174 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC6.94□□□□□ -1.3
PCDH1Q08174 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC6.94□□□□□ -1.3
PCDH1Q08174 AP001646.1-201ENST00000527936 915 ntBASIC6.94□□□□□ -1.3
PCDH1Q08174 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC6.94□□□□□ -1.3
PCDH1Q08174 ATP5J2P4-201ENST00000538774 267 ntBASIC6.94□□□□□ -1.3
PCDH1Q08174 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC6.94□□□□□ -1.3
PCDH1Q08174 AC011595.1-201ENST00000548901 753 ntTSL 3 BASIC6.94□□□□□ -1.3
PCDH1Q08174 C14orf2-209ENST00000554880 707 ntAPPRIS P1 TSL 3 BASIC6.94□□□□□ -1.3
PCDH1Q08174 FRG2IP-201ENST00000563581 781 ntBASIC6.94□□□□□ -1.3
PCDH1Q08174 RAB27A-205ENST00000564609 1057 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
PCDH1Q08174 AC027801.5-201ENST00000574365 416 ntTSL 3 BASIC6.94□□□□□ -1.3
PCDH1Q08174 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC6.94□□□□□ -1.3
PCDH1Q08174 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC6.94□□□□□ -1.3
PCDH1Q08174 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC6.94□□□□□ -1.3
PCDH1Q08174 PRR13P5-201ENST00000596581 442 ntBASIC6.94□□□□□ -1.3
PCDH1Q08174 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC6.94□□□□□ -1.3
PCDH1Q08174 AC113361.1-201ENST00000606683 543 ntBASIC6.94□□□□□ -1.3
PCDH1Q08174 AL596325.2-201ENST00000609669 505 ntTSL 3 BASIC6.94□□□□□ -1.3
PCDH1Q08174 CU638689.4-205ENST00000623313 596 ntTSL 4 BASIC6.94□□□□□ -1.3
PCDH1Q08174 AC015726.3-201ENST00000624501 418 ntBASIC6.94□□□□□ -1.3
PCDH1Q08174 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC6.94□□□□□ -1.3
PCDH1Q08174 LINC01739-205ENST00000641890 573 ntBASIC6.94□□□□□ -1.3
PCDH1Q08174 ELF2P3-201ENST00000445099 1506 ntBASIC6.94□□□□□ -1.3
PCDH1Q08174 DCP1B-205ENST00000540622 1547 ntTSL 5 BASIC6.94□□□□□ -1.3
PCDH1Q08174 OR2T33-202ENST00000641220 4118 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
PCDH1Q08174 UTP15-201ENST00000296792 3687 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
PCDH1Q08174 KPNB1-203ENST00000540627 2989 ntTSL 2 BASIC6.94□□□□□ -1.3
PCDH1Q08174 AF131216.1-201ENST00000498997 5856 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
PCDH1Q08174 ATP5S-202ENST00000311459 10212 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
PCDH1Q08174 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC6.94□□□□□ -1.3
PCDH1Q08174 ZNF326-203ENST00000370447 9433 ntAPPRIS ALT2 TSL 1 (best) BASIC6.94□□□□□ -1.3
PCDH1Q08174 ZNF214-204ENST00000536068 2562 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
PCDH1Q08174 GDF9-202ENST00000378673 2640 ntAPPRIS P1 TSL 5 BASIC6.94□□□□□ -1.3
PCDH1Q08174 MEF2C-244ENST00000636998 5936 ntTSL 5 BASIC6.94□□□□□ -1.3
PCDH1Q08174 SYNE2-216ENST00000555002 11532 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
PCDH1Q08174 CCDC158-201ENST00000388914 3663 ntAPPRIS P1 TSL 5 BASIC6.94□□□□□ -1.3
PCDH1Q08174 TMC5-208ENST00000564959 2434 ntTSL 2 BASIC6.93□□□□□ -1.3
PCDH1Q08174 BDNF-212ENST00000525528 4766 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
PCDH1Q08174 BEST1-202ENST00000449131 4267 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
PCDH1Q08174 ZNF211-202ENST00000254182 1959 ntTSL 2 BASIC6.93□□□□□ -1.3
PCDH1Q08174 MED6-212ENST00000615788 1700 ntTSL 5 BASIC6.93□□□□□ -1.3
PCDH1Q08174 ZNF407-202ENST00000309902 5595 ntTSL 2 BASIC6.93□□□□□ -1.3
PCDH1Q08174 SLAMF1-202ENST00000302035 4006 ntAPPRIS P3 TSL 1 (best) BASIC6.93□□□□□ -1.3
PCDH1Q08174 LINC01013-201ENST00000422700 1831 ntTSL 5 BASIC6.93□□□□□ -1.3
PCDH1Q08174 ABCD3-202ENST00000370214 3538 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
PCDH1Q08174 RNU6-543P-201ENST00000362576 108 ntBASIC6.93□□□□□ -1.3
PCDH1Q08174 Y_RNA.311-201ENST00000365068 96 ntBASIC6.93□□□□□ -1.3
PCDH1Q08174 SNORA30B-201ENST00000365319 129 ntBASIC6.93□□□□□ -1.3
PCDH1Q08174 RAET1G-201ENST00000367360 1107 ntAPPRIS P2 TSL 1 (best) BASIC6.93□□□□□ -1.3
PCDH1Q08174 SNORA51.7-201ENST00000384171 134 ntBASIC6.93□□□□□ -1.3
PCDH1Q08174 IGLV3-10-201ENST00000390315 382 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
PCDH1Q08174 RNU6-1055P-201ENST00000391085 107 ntBASIC6.93□□□□□ -1.3
PCDH1Q08174 AC090114.1-201ENST00000393266 448 ntBASIC6.93□□□□□ -1.3
PCDH1Q08174 RNU6-575P-201ENST00000411326 105 ntBASIC6.93□□□□□ -1.3
PCDH1Q08174 HMGN1P14-201ENST00000412459 517 ntBASIC6.93□□□□□ -1.3
PCDH1Q08174 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC6.93□□□□□ -1.3
PCDH1Q08174 RPL7P44-201ENST00000424827 742 ntBASIC6.93□□□□□ -1.3
PCDH1Q08174 AL354983.1-201ENST00000434580 906 ntBASIC6.93□□□□□ -1.3
PCDH1Q08174 LINC01291-203ENST00000435984 565 ntTSL 3 BASIC6.93□□□□□ -1.3
PCDH1Q08174 RPL29P7-201ENST00000440227 457 ntBASIC6.93□□□□□ -1.3
PCDH1Q08174 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC6.93□□□□□ -1.3
PCDH1Q08174 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC6.93□□□□□ -1.3
PCDH1Q08174 COX6CP12-201ENST00000446748 202 ntBASIC6.93□□□□□ -1.3
PCDH1Q08174 RPSAP7-201ENST00000456871 885 ntBASIC6.93□□□□□ -1.3
PCDH1Q08174 AC009411.2-201ENST00000458359 539 ntTSL 4 BASIC6.93□□□□□ -1.3
PCDH1Q08174 AC008620.1-201ENST00000468453 592 ntBASIC6.93□□□□□ -1.3
PCDH1Q08174 AC041039.1-201ENST00000485656 536 ntBASIC6.93□□□□□ -1.3
PCDH1Q08174 AC117395.1-201ENST00000487390 403 ntBASIC6.93□□□□□ -1.3
PCDH1Q08174 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC6.93□□□□□ -1.3
PCDH1Q08174 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC6.93□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 75 ms