Protein–RNA interactions for Protein: Q05901

CHRNB3, Neuronal acetylcholine receptor subunit beta-3, humanhuman

Predictions only

Length 458 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB3Q05901 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC5.33□□□□□ -1.56
CHRNB3Q05901 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC5.33□□□□□ -1.56
CHRNB3Q05901 EIF4EP5-201ENST00000528228 640 ntBASIC5.33□□□□□ -1.56
CHRNB3Q05901 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC5.33□□□□□ -1.56
CHRNB3Q05901 CYCSP38-201ENST00000559840 322 ntBASIC5.33□□□□□ -1.56
CHRNB3Q05901 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC5.33□□□□□ -1.56
CHRNB3Q05901 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CHRNB3Q05901 LINC00556-201ENST00000569603 412 ntBASIC5.33□□□□□ -1.56
CHRNB3Q05901 MIR4701-201ENST00000583094 63 ntBASIC5.33□□□□□ -1.56
CHRNB3Q05901 MIR4660-201ENST00000583549 74 ntBASIC5.33□□□□□ -1.56
CHRNB3Q05901 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC5.33□□□□□ -1.56
CHRNB3Q05901 AP2S1-210ENST00000601649 315 ntTSL 3 BASIC5.33□□□□□ -1.56
CHRNB3Q05901 IPO5-229ENST00000631030 192 ntTSL 5 BASIC5.33□□□□□ -1.56
CHRNB3Q05901 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC5.33□□□□□ -1.56
CHRNB3Q05901 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CHRNB3Q05901 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC5.33□□□□□ -1.56
CHRNB3Q05901 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
CHRNB3Q05901 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC5.32□□□□□ -1.56
CHRNB3Q05901 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
CHRNB3Q05901 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC5.32□□□□□ -1.56
CHRNB3Q05901 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CHRNB3Q05901 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC5.32□□□□□ -1.56
CHRNB3Q05901 AP001284.1-201ENST00000528393 2118 ntBASIC5.32□□□□□ -1.56
CHRNB3Q05901 ATP5A1P1-201ENST00000454088 1321 ntBASIC5.32□□□□□ -1.56
CHRNB3Q05901 RASSF8-216ENST00000615708 1328 ntTSL 5 BASIC5.32□□□□□ -1.56
CHRNB3Q05901 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC5.32□□□□□ -1.56
CHRNB3Q05901 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CHRNB3Q05901 TAF13-201ENST00000338366 813 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CHRNB3Q05901 POU1F1-201ENST00000344265 1149 ntTSL 5 BASIC5.32□□□□□ -1.56
CHRNB3Q05901 RNA5SP326-201ENST00000363209 110 ntBASIC5.32□□□□□ -1.56
CHRNB3Q05901 U3.7-201ENST00000363668 216 ntBASIC5.32□□□□□ -1.56
CHRNB3Q05901 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC5.32□□□□□ -1.56
CHRNB3Q05901 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CHRNB3Q05901 TMBIM4-203ENST00000398033 844 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CHRNB3Q05901 PEX12P1-201ENST00000400284 1048 ntBASIC5.32□□□□□ -1.56
CHRNB3Q05901 HMGN1P20-201ENST00000411849 300 ntBASIC5.32□□□□□ -1.56
CHRNB3Q05901 RPL35AP3-201ENST00000414680 288 ntBASIC5.32□□□□□ -1.56
CHRNB3Q05901 HYALP1-201ENST00000417674 1279 ntBASIC5.32□□□□□ -1.56
CHRNB3Q05901 KIF4CP-201ENST00000422742 1279 ntBASIC5.32□□□□□ -1.56
CHRNB3Q05901 HMGN2P27-201ENST00000427352 270 ntBASIC5.32□□□□□ -1.56
CHRNB3Q05901 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC5.32□□□□□ -1.56
CHRNB3Q05901 AL389925.1-201ENST00000432257 728 ntBASIC5.32□□□□□ -1.56
CHRNB3Q05901 DNAJA1P5-201ENST00000440278 943 ntBASIC5.32□□□□□ -1.56
CHRNB3Q05901 AC073465.2-201ENST00000440938 498 ntBASIC5.32□□□□□ -1.56
CHRNB3Q05901 AC092941.2-201ENST00000444379 1008 ntTSL 3 BASIC5.32□□□□□ -1.56
CHRNB3Q05901 LINC01456-201ENST00000453902 708 ntTSL 3 BASIC5.32□□□□□ -1.56
CHRNB3Q05901 ACA64.1-201ENST00000459171 127 ntBASIC5.32□□□□□ -1.56
CHRNB3Q05901 RN7SL188P-201ENST00000469842 285 ntBASIC5.32□□□□□ -1.56
CHRNB3Q05901 RN7SKP35-201ENST00000517210 151 ntBASIC5.32□□□□□ -1.56
CHRNB3Q05901 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC5.32□□□□□ -1.56
CHRNB3Q05901 AC010768.4-201ENST00000528183 520 ntTSL 3 BASIC5.32□□□□□ -1.56
CHRNB3Q05901 AC079064.1-201ENST00000528365 362 ntBASIC5.32□□□□□ -1.56
CHRNB3Q05901 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CHRNB3Q05901 TCEANC-205ENST00000544987 1146 ntTSL 5 BASIC5.32□□□□□ -1.56
CHRNB3Q05901 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC5.32□□□□□ -1.56
CHRNB3Q05901 AC007956.1-201ENST00000555623 542 ntBASIC5.32□□□□□ -1.56
CHRNB3Q05901 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC5.32□□□□□ -1.56
CHRNB3Q05901 ASNSD1-208ENST00000607690 535 ntTSL 2 BASIC5.32□□□□□ -1.56
CHRNB3Q05901 RNU6-84P-201ENST00000607737 102 ntBASIC5.32□□□□□ -1.56
CHRNB3Q05901 AC004801.6-201ENST00000616571 978 ntBASIC5.32□□□□□ -1.56
CHRNB3Q05901 LINC00284-211ENST00000620454 534 ntTSL 4 BASIC5.32□□□□□ -1.56
CHRNB3Q05901 LINC02033-201ENST00000623207 971 ntTSL 2 BASIC5.32□□□□□ -1.56
CHRNB3Q05901 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
CHRNB3Q05901 AC008079.2-201ENST00000623543 20396 ntBASIC5.32□□□□□ -1.56
CHRNB3Q05901 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
CHRNB3Q05901 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
CHRNB3Q05901 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CHRNB3Q05901 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CHRNB3Q05901 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
CHRNB3Q05901 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CHRNB3Q05901 AC083899.1-201ENST00000454465 3819 ntBASIC5.32□□□□□ -1.56
CHRNB3Q05901 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CHRNB3Q05901 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC5.32□□□□□ -1.56
CHRNB3Q05901 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CHRNB3Q05901 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CHRNB3Q05901 AC097063.1-201ENST00000426714 1797 ntBASIC5.32□□□□□ -1.56
CHRNB3Q05901 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CHRNB3Q05901 PHACTR2P1-201ENST00000605639 1414 ntBASIC5.31□□□□□ -1.56
CHRNB3Q05901 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC5.31□□□□□ -1.56
CHRNB3Q05901 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC5.31□□□□□ -1.56
CHRNB3Q05901 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC5.31□□□□□ -1.56
CHRNB3Q05901 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CHRNB3Q05901 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CHRNB3Q05901 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC5.31□□□□□ -1.56
CHRNB3Q05901 C11orf54-206ENST00000528099 1862 ntAPPRIS P1 TSL 2 BASIC5.31□□□□□ -1.56
CHRNB3Q05901 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CHRNB3Q05901 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
CHRNB3Q05901 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
CHRNB3Q05901 RNA5SP110-201ENST00000362638 115 ntBASIC5.31□□□□□ -1.56
CHRNB3Q05901 MIR130A-201ENST00000385274 89 ntBASIC5.31□□□□□ -1.56
CHRNB3Q05901 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
CHRNB3Q05901 CBX1P3-201ENST00000413296 527 ntBASIC5.31□□□□□ -1.56
CHRNB3Q05901 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC5.31□□□□□ -1.56
CHRNB3Q05901 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC5.31□□□□□ -1.56
CHRNB3Q05901 AC007283.1-201ENST00000434645 445 ntTSL 5 BASIC5.31□□□□□ -1.56
CHRNB3Q05901 AL353662.1-201ENST00000439099 327 ntBASIC5.31□□□□□ -1.56
CHRNB3Q05901 CYCSP51-201ENST00000443545 318 ntBASIC5.31□□□□□ -1.56
CHRNB3Q05901 CFL1P4-201ENST00000451536 498 ntBASIC5.31□□□□□ -1.56
CHRNB3Q05901 RN7SL269P-201ENST00000467795 305 ntBASIC5.31□□□□□ -1.56
CHRNB3Q05901 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC5.31□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 90.8 ms