Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 GPRC5D-AS1-208ENST00000545914 566 ntTSL 3 BASIC5.39□□□□□ -1.55
CLDN20P56880 MGAT4C-206ENST00000552435 550 ntTSL 4 BASIC5.39□□□□□ -1.55
CLDN20P56880 LINC02406-201ENST00000553029 546 ntTSL 3 BASIC5.39□□□□□ -1.55
CLDN20P56880 AL049779.3-201ENST00000557141 606 ntBASIC5.39□□□□□ -1.55
CLDN20P56880 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC5.39□□□□□ -1.55
CLDN20P56880 LINC01572-205ENST00000570152 360 ntTSL 3 BASIC5.39□□□□□ -1.55
CLDN20P56880 AP001011.1-201ENST00000583546 690 ntTSL 3 BASIC5.39□□□□□ -1.55
CLDN20P56880 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC5.39□□□□□ -1.55
CLDN20P56880 MIR132-201ENST00000591554 101 ntBASIC5.39□□□□□ -1.55
CLDN20P56880 AL353804.2-201ENST00000603360 347 ntTSL 5 BASIC5.39□□□□□ -1.55
CLDN20P56880 HMGB1P51-201ENST00000605166 638 ntBASIC5.39□□□□□ -1.55
CLDN20P56880 OR51C1P-201ENST00000608504 942 ntBASIC5.39□□□□□ -1.55
CLDN20P56880 MIR6793-201ENST00000612376 63 ntBASIC5.39□□□□□ -1.55
CLDN20P56880 AC006249.1-201ENST00000621223 471 ntBASIC5.39□□□□□ -1.55
CLDN20P56880 AC129778.1-202ENST00000623812 261 ntBASIC5.39□□□□□ -1.55
CLDN20P56880 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC5.39□□□□□ -1.55
CLDN20P56880 AL591379.1-207ENST00000635982 261 ntBASIC5.39□□□□□ -1.55
CLDN20P56880 AMYH02020865.1-205ENST00000636189 261 ntBASIC5.39□□□□□ -1.55
CLDN20P56880 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CLDN20P56880 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CLDN20P56880 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CLDN20P56880 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC5.39□□□□□ -1.55
CLDN20P56880 INSIG2-208ENST00000614681 1347 ntTSL 5 BASIC5.39□□□□□ -1.55
CLDN20P56880 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CLDN20P56880 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CLDN20P56880 DDX6P1-205ENST00000441966 1436 ntBASIC5.39□□□□□ -1.55
CLDN20P56880 AL121839.2-201ENST00000565058 6943 ntBASIC5.39□□□□□ -1.55
CLDN20P56880 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CLDN20P56880 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
CLDN20P56880 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC5.38□□□□□ -1.55
CLDN20P56880 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CLDN20P56880 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC5.38□□□□□ -1.55
CLDN20P56880 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CLDN20P56880 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC5.38□□□□□ -1.55
CLDN20P56880 AC140479.2-201ENST00000421567 3130 ntBASIC5.38□□□□□ -1.55
CLDN20P56880 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CLDN20P56880 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC5.38□□□□□ -1.55
CLDN20P56880 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC5.38□□□□□ -1.55
CLDN20P56880 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
CLDN20P56880 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
CLDN20P56880 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CLDN20P56880 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC5.38□□□□□ -1.55
CLDN20P56880 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC5.38□□□□□ -1.55
CLDN20P56880 RNF19BPX-201ENST00000426224 625 ntBASIC5.38□□□□□ -1.55
CLDN20P56880 FAM53B-AS1-201ENST00000432699 558 ntTSL 2 BASIC5.38□□□□□ -1.55
CLDN20P56880 MTND2P40-201ENST00000436718 841 ntBASIC5.38□□□□□ -1.55
CLDN20P56880 NDUFS5P5-201ENST00000437256 321 ntBASIC5.38□□□□□ -1.55
CLDN20P56880 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CLDN20P56880 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC5.38□□□□□ -1.55
CLDN20P56880 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC5.38□□□□□ -1.55
CLDN20P56880 EIF4A2P2-201ENST00000455776 1070 ntBASIC5.38□□□□□ -1.55
CLDN20P56880 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC5.38□□□□□ -1.55
CLDN20P56880 AC023245.1-201ENST00000468501 517 ntBASIC5.38□□□□□ -1.55
CLDN20P56880 RPL23AP40-201ENST00000487630 390 ntBASIC5.38□□□□□ -1.55
CLDN20P56880 TRBV5-2-201ENST00000489095 273 ntBASIC5.38□□□□□ -1.55
CLDN20P56880 CCDC11P1-201ENST00000503137 1162 ntBASIC5.38□□□□□ -1.55
CLDN20P56880 AC008629.2-201ENST00000503783 483 ntBASIC5.38□□□□□ -1.55
CLDN20P56880 AK4P6-201ENST00000505168 528 ntBASIC5.38□□□□□ -1.55
CLDN20P56880 AC098859.2-201ENST00000506232 563 ntTSL 4 BASIC5.38□□□□□ -1.55
CLDN20P56880 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC5.38□□□□□ -1.55
CLDN20P56880 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC5.38□□□□□ -1.55
CLDN20P56880 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC5.38□□□□□ -1.55
CLDN20P56880 AC025524.2-206ENST00000517953 439 ntTSL 3 BASIC5.38□□□□□ -1.55
CLDN20P56880 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC5.38□□□□□ -1.55
CLDN20P56880 AC244502.2-201ENST00000543361 851 ntBASIC5.38□□□□□ -1.55
CLDN20P56880 AC012555.2-201ENST00000549448 413 ntTSL 3 BASIC5.38□□□□□ -1.55
CLDN20P56880 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC5.38□□□□□ -1.55
CLDN20P56880 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
CLDN20P56880 AC009121.2-202ENST00000572706 505 ntTSL 3 BASIC5.38□□□□□ -1.55
CLDN20P56880 AC139099.3-202ENST00000574856 439 ntTSL 2 BASIC5.38□□□□□ -1.55
CLDN20P56880 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC5.38□□□□□ -1.55
CLDN20P56880 MIR4776-2-201ENST00000580204 80 ntBASIC5.38□□□□□ -1.55
CLDN20P56880 AL671309.1-201ENST00000603750 544 ntBASIC5.38□□□□□ -1.55
CLDN20P56880 AC015982.1-201ENST00000608113 465 ntBASIC5.38□□□□□ -1.55
CLDN20P56880 AL096712.1-201ENST00000614561 159 ntBASIC5.38□□□□□ -1.55
CLDN20P56880 RBMS3-AS2-206ENST00000629296 438 ntTSL 5 BASIC5.38□□□□□ -1.55
CLDN20P56880 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC5.38□□□□□ -1.55
CLDN20P56880 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC5.38□□□□□ -1.55
CLDN20P56880 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CLDN20P56880 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CLDN20P56880 AP001002.1-201ENST00000625148 1513 ntBASIC5.38□□□□□ -1.55
CLDN20P56880 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CLDN20P56880 ALB-202ENST00000401494 1659 ntTSL 5 BASIC5.37□□□□□ -1.55
CLDN20P56880 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC5.37□□□□□ -1.55
CLDN20P56880 AC093909.5-201ENST00000621839 1799 ntBASIC5.37□□□□□ -1.55
CLDN20P56880 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CLDN20P56880 ICE2P1-201ENST00000512800 1849 ntBASIC5.37□□□□□ -1.55
CLDN20P56880 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CLDN20P56880 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
CLDN20P56880 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CLDN20P56880 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC5.37□□□□□ -1.55
CLDN20P56880 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CLDN20P56880 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC5.37□□□□□ -1.55
CLDN20P56880 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC5.37□□□□□ -1.55
CLDN20P56880 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
CLDN20P56880 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
CLDN20P56880 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
CLDN20P56880 SELENOWP1-201ENST00000322792 252 ntBASIC5.37□□□□□ -1.55
CLDN20P56880 TAF13-201ENST00000338366 813 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CLDN20P56880 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC5.37□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 123.7 ms