Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC5.59□□□□□ -1.51
CDH13P55290 OR56A4-203ENST00000641279 1209 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
CDH13P55290 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CDH13P55290 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CDH13P55290 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC5.59□□□□□ -1.51
CDH13P55290 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC5.59□□□□□ -1.51
CDH13P55290 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CDH13P55290 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
CDH13P55290 AC109446.4-201ENST00000623235 2755 ntBASIC5.59□□□□□ -1.52
CDH13P55290 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC5.59□□□□□ -1.52
CDH13P55290 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC5.59□□□□□ -1.52
CDH13P55290 ALB-220ENST00000621628 1606 ntTSL 5 BASIC5.59□□□□□ -1.52
CDH13P55290 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.52
CDH13P55290 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
CDH13P55290 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CDH13P55290 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC5.58□□□□□ -1.52
CDH13P55290 AC027088.4-201ENST00000611559 1947 ntBASIC5.58□□□□□ -1.52
CDH13P55290 DDX6-207ENST00000617381 2883 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CDH13P55290 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC5.58□□□□□ -1.52
CDH13P55290 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
CDH13P55290 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC5.58□□□□□ -1.52
CDH13P55290 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC5.58□□□□□ -1.52
CDH13P55290 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC5.58□□□□□ -1.52
CDH13P55290 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC5.58□□□□□ -1.52
CDH13P55290 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CDH13P55290 MGP-201ENST00000228938 694 ntTSL 3 BASIC5.58□□□□□ -1.52
CDH13P55290 PLSCR2-201ENST00000336685 1272 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CDH13P55290 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
CDH13P55290 RN7SKP185-201ENST00000362813 326 ntBASIC5.58□□□□□ -1.52
CDH13P55290 RNA5SP326-201ENST00000363209 110 ntBASIC5.58□□□□□ -1.52
CDH13P55290 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC5.58□□□□□ -1.52
CDH13P55290 MIR130A-201ENST00000385274 89 ntBASIC5.58□□□□□ -1.52
CDH13P55290 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
CDH13P55290 U3.23-201ENST00000391132 200 ntBASIC5.58□□□□□ -1.52
CDH13P55290 AL589655.1-201ENST00000405398 482 ntBASIC5.58□□□□□ -1.52
CDH13P55290 AL358178.1-201ENST00000407698 397 ntBASIC5.58□□□□□ -1.52
CDH13P55290 MRPL53P1-201ENST00000414323 319 ntBASIC5.58□□□□□ -1.52
CDH13P55290 AL049712.1-201ENST00000418739 872 ntTSL 3 BASIC5.58□□□□□ -1.52
CDH13P55290 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC5.58□□□□□ -1.52
CDH13P55290 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC5.58□□□□□ -1.52
CDH13P55290 AL359636.1-201ENST00000433572 522 ntTSL 3 BASIC5.58□□□□□ -1.52
CDH13P55290 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC5.58□□□□□ -1.52
CDH13P55290 ARL5AP3-201ENST00000439327 386 ntBASIC5.58□□□□□ -1.52
CDH13P55290 EIF5AP4-201ENST00000441206 465 ntBASIC5.58□□□□□ -1.52
CDH13P55290 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC5.58□□□□□ -1.52
CDH13P55290 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC5.58□□□□□ -1.52
CDH13P55290 EEF1B2P3-201ENST00000447718 678 ntBASIC5.58□□□□□ -1.52
CDH13P55290 AC009963.3-201ENST00000458090 486 ntBASIC5.58□□□□□ -1.52
CDH13P55290 AC023194.2-201ENST00000465398 406 ntBASIC5.58□□□□□ -1.52
CDH13P55290 RN7SL193P-201ENST00000491708 276 ntBASIC5.58□□□□□ -1.52
CDH13P55290 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC5.58□□□□□ -1.52
CDH13P55290 AC008413.2-201ENST00000507398 342 ntTSL 3 BASIC5.58□□□□□ -1.52
CDH13P55290 GLUD1P3-202ENST00000508551 200 ntBASIC5.58□□□□□ -1.52
CDH13P55290 AC026782.2-201ENST00000510845 636 ntBASIC5.58□□□□□ -1.52
CDH13P55290 WBP1LP3-201ENST00000523033 208 ntBASIC5.58□□□□□ -1.52
CDH13P55290 ASB8-202ENST00000535055 657 ntTSL 2 BASIC5.58□□□□□ -1.52
CDH13P55290 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC5.58□□□□□ -1.52
CDH13P55290 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC5.58□□□□□ -1.52
CDH13P55290 MED21-206ENST00000546323 575 ntTSL 3 BASIC5.58□□□□□ -1.52
CDH13P55290 AC078864.1-201ENST00000547538 512 ntTSL 4 BASIC5.58□□□□□ -1.52
CDH13P55290 AC139697.1-201ENST00000548429 745 ntBASIC5.58□□□□□ -1.52
CDH13P55290 AL138974.1-201ENST00000551227 741 ntTSL 5 BASIC5.58□□□□□ -1.52
CDH13P55290 AL133371.1-201ENST00000555481 764 ntTSL 2 BASIC5.58□□□□□ -1.52
CDH13P55290 AC021351.1-202ENST00000561394 701 ntTSL 3 BASIC5.58□□□□□ -1.52
CDH13P55290 AC096996.1-201ENST00000563813 325 ntBASIC5.58□□□□□ -1.52
CDH13P55290 DHFRP1-201ENST00000579682 559 ntBASIC5.58□□□□□ -1.52
CDH13P55290 AC243756.1-201ENST00000584068 660 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
CDH13P55290 AP001381.1-201ENST00000584109 534 ntTSL 5 BASIC5.58□□□□□ -1.52
CDH13P55290 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC5.58□□□□□ -1.52
CDH13P55290 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC5.58□□□□□ -1.52
CDH13P55290 AC090236.2-201ENST00000587933 1101 ntBASIC5.58□□□□□ -1.52
CDH13P55290 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC5.58□□□□□ -1.52
CDH13P55290 NANOGP3-201ENST00000605855 286 ntBASIC5.58□□□□□ -1.52
CDH13P55290 AC015802.5-201ENST00000607478 399 ntBASIC5.58□□□□□ -1.52
CDH13P55290 AC003001.2-201ENST00000616294 831 ntBASIC5.58□□□□□ -1.52
CDH13P55290 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
CDH13P55290 AC005618.4-201ENST00000625053 554 ntBASIC5.58□□□□□ -1.52
CDH13P55290 MTND5P23-201ENST00000430812 1655 ntBASIC5.58□□□□□ -1.52
CDH13P55290 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
CDH13P55290 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
CDH13P55290 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CDH13P55290 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC5.58□□□□□ -1.52
CDH13P55290 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC5.58□□□□□ -1.52
CDH13P55290 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC5.58□□□□□ -1.52
CDH13P55290 AC104966.1-201ENST00000467010 1464 ntBASIC5.58□□□□□ -1.52
CDH13P55290 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC5.58□□□□□ -1.52
CDH13P55290 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC5.57□□□□□ -1.52
CDH13P55290 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC5.57□□□□□ -1.52
CDH13P55290 ADAM24P-201ENST00000398655 2101 ntBASIC5.57□□□□□ -1.52
CDH13P55290 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
CDH13P55290 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
CDH13P55290 FGG-201ENST00000336098 1659 ntTSL 2 BASIC5.57□□□□□ -1.52
CDH13P55290 AC003985.2-201ENST00000562268 1669 ntBASIC5.57□□□□□ -1.52
CDH13P55290 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
CDH13P55290 RALGAPA1P1-201ENST00000443361 6232 ntBASIC5.57□□□□□ -1.52
CDH13P55290 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CDH13P55290 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CDH13P55290 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC5.57□□□□□ -1.52
CDH13P55290 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
CDH13P55290 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 150.7 ms