Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
PMS1P54277 SOAT1-201ENST00000367619 6835 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
PMS1P54277 RAD54B-201ENST00000297592 1879 ntTSL 2 BASIC7.03□□□□□ -1.28
PMS1P54277 CUZD1-205ENST00000368904 2903 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
PMS1P54277 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
PMS1P54277 PSMA6-201ENST00000261479 1029 ntAPPRIS P2 TSL 1 (best) BASIC7.03□□□□□ -1.28
PMS1P54277 OR4D11-201ENST00000313253 936 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
PMS1P54277 OR11H13P-201ENST00000359695 979 ntBASIC7.03□□□□□ -1.28
PMS1P54277 TRAJ46-201ENST00000390491 63 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
PMS1P54277 RNU6-932P-201ENST00000391108 106 ntBASIC7.03□□□□□ -1.28
PMS1P54277 AC233289.1-201ENST00000403700 508 ntBASIC7.03□□□□□ -1.28
PMS1P54277 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC7.03□□□□□ -1.28
PMS1P54277 AC116036.1-201ENST00000412199 367 ntBASIC7.03□□□□□ -1.28
PMS1P54277 ELOCP9-201ENST00000418624 239 ntBASIC7.03□□□□□ -1.28
PMS1P54277 GTF2IP2-201ENST00000424290 697 ntBASIC7.03□□□□□ -1.28
PMS1P54277 MTCO3P30-201ENST00000426425 670 ntBASIC7.03□□□□□ -1.28
PMS1P54277 OR6R1P-201ENST00000431838 940 ntBASIC7.03□□□□□ -1.28
PMS1P54277 LHFPL3-AS1-204ENST00000433514 748 ntTSL 2 BASIC7.03□□□□□ -1.28
PMS1P54277 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC7.03□□□□□ -1.28
PMS1P54277 AC139712.3-201ENST00000443926 639 ntTSL 2 BASIC7.03□□□□□ -1.28
PMS1P54277 MTND2P4-201ENST00000445034 1004 ntBASIC7.03□□□□□ -1.28
PMS1P54277 AL355390.2-201ENST00000446691 880 ntTSL 5 BASIC7.03□□□□□ -1.28
PMS1P54277 AL133319.1-201ENST00000447848 777 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
PMS1P54277 PHKA2-AS1-202ENST00000452900 656 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
PMS1P54277 RPS27AP3-201ENST00000453803 454 ntBASIC7.03□□□□□ -1.28
PMS1P54277 GTF2IP12-201ENST00000456547 356 ntBASIC7.03□□□□□ -1.28
PMS1P54277 AL122019.1-202ENST00000458070 546 ntTSL 5 BASIC7.03□□□□□ -1.28
PMS1P54277 FAM107B-217ENST00000478076 790 ntAPPRIS P1 TSL 4 BASIC7.03□□□□□ -1.28
PMS1P54277 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC7.03□□□□□ -1.28
PMS1P54277 AC011396.2-201ENST00000515598 582 ntTSL 3 BASIC7.03□□□□□ -1.28
PMS1P54277 MAL2-205ENST00000521048 575 ntTSL 4 BASIC7.03□□□□□ -1.28
PMS1P54277 HMGB1P1-201ENST00000522557 636 ntBASIC7.03□□□□□ -1.28
PMS1P54277 IGHV1-14-201ENST00000523391 241 ntBASIC7.03□□□□□ -1.28
PMS1P54277 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC7.03□□□□□ -1.28
PMS1P54277 AC006518.2-201ENST00000542513 940 ntBASIC7.03□□□□□ -1.28
PMS1P54277 AC092865.1-201ENST00000544395 1023 ntBASIC7.03□□□□□ -1.28
PMS1P54277 AL138974.1-201ENST00000551227 741 ntTSL 5 BASIC7.03□□□□□ -1.28
PMS1P54277 AL137230.1-202ENST00000553996 420 ntTSL 2 BASIC7.03□□□□□ -1.28
PMS1P54277 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC7.03□□□□□ -1.28
PMS1P54277 AC073941.1-201ENST00000559148 539 ntTSL 4 BASIC7.03□□□□□ -1.28
PMS1P54277 MIR9-3HG-211ENST00000561037 779 ntTSL 5 BASIC7.03□□□□□ -1.28
PMS1P54277 AC090695.1-201ENST00000561269 1222 ntBASIC7.03□□□□□ -1.28
PMS1P54277 RAB27A-212ENST00000569493 1013 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
PMS1P54277 AC092376.1-201ENST00000569677 335 ntTSL 2 BASIC7.03□□□□□ -1.28
PMS1P54277 MRPS21P9-201ENST00000571150 257 ntBASIC7.03□□□□□ -1.28
PMS1P54277 MIR3189-201ENST00000578735 73 ntBASIC7.03□□□□□ -1.28
PMS1P54277 AC012254.2-203ENST00000588705 561 ntAPPRIS P5 TSL 2 BASIC7.03□□□□□ -1.28
PMS1P54277 AC008794.1-201ENST00000593063 560 ntTSL 4 BASIC7.03□□□□□ -1.28
PMS1P54277 MTCO2P22-201ENST00000603246 681 ntBASIC7.03□□□□□ -1.28
PMS1P54277 MIR6085-201ENST00000618314 110 ntBASIC7.03□□□□□ -1.28
PMS1P54277 AC068792.1-201ENST00000621354 417 ntBASIC7.03□□□□□ -1.28
PMS1P54277 HIPK2-202ENST00000406875 15049 ntAPPRIS P4 TSL 1 (best) BASIC7.03□□□□□ -1.28
PMS1P54277 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
PMS1P54277 GRIA3-207ENST00000620443 4943 ntAPPRIS ALT1 TSL 1 (best) BASIC7.03□□□□□ -1.28
PMS1P54277 ZNF528-203ENST00000391788 4209 ntTSL 2 BASIC7.03□□□□□ -1.28
PMS1P54277 ADAL-203ENST00000428046 3514 ntTSL 2 BASIC7.03□□□□□ -1.28
PMS1P54277 TMC5-205ENST00000542583 4872 ntAPPRIS ALT2 TSL 2 BASIC7.03□□□□□ -1.28
PMS1P54277 DCLK1-208ENST00000615680 7592 ntTSL 2 BASIC7.03□□□□□ -1.28
PMS1P54277 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
PMS1P54277 CNTRL-204ENST00000373847 3372 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
PMS1P54277 MUC5B-204ENST00000529681 17911 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
PMS1P54277 HMG20A-201ENST00000336216 4046 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
PMS1P54277 PUM1-206ENST00000426105 4043 ntAPPRIS ALT1 TSL 1 (best) BASIC7.03□□□□□ -1.28
PMS1P54277 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC7.02□□□□□ -1.28
PMS1P54277 AF121898.1-201ENST00000440763 1860 ntTSL 5 BASIC7.02□□□□□ -1.28
PMS1P54277 MAPK10-270ENST00000641102 3538 ntBASIC7.02□□□□□ -1.28
PMS1P54277 ZNF540-201ENST00000316433 3099 ntAPPRIS P3 TSL 1 (best) BASIC7.02□□□□□ -1.29
PMS1P54277 DOCK11P1-201ENST00000553480 5932 ntBASIC7.02□□□□□ -1.29
PMS1P54277 PLEKHA1-205ENST00000433307 3704 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
PMS1P54277 NBEA-207ENST00000537702 4089 ntTSL 2 BASIC7.02□□□□□ -1.29
PMS1P54277 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC7.02□□□□□ -1.29
PMS1P54277 RERGL-201ENST00000229002 1147 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
PMS1P54277 FAM183A-201ENST00000335282 488 ntAPPRIS P1 TSL 2 BASIC7.02□□□□□ -1.29
PMS1P54277 SNORD8-201ENST00000363915 110 ntBASIC7.02□□□□□ -1.29
PMS1P54277 RNU4-24P-201ENST00000364565 139 ntBASIC7.02□□□□□ -1.29
PMS1P54277 RBMS3-AS2-201ENST00000366321 582 ntTSL 3 BASIC7.02□□□□□ -1.29
PMS1P54277 FAM183A-205ENST00000410048 500 ntTSL 3 BASIC7.02□□□□□ -1.29
PMS1P54277 AL035407.1-201ENST00000429211 571 ntBASIC7.02□□□□□ -1.29
PMS1P54277 AL589823.1-201ENST00000429577 183 ntBASIC7.02□□□□□ -1.29
PMS1P54277 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC7.02□□□□□ -1.29
PMS1P54277 GTF2IP14-201ENST00000441415 586 ntBASIC7.02□□□□□ -1.29
PMS1P54277 AC103563.5-201ENST00000455643 364 ntBASIC7.02□□□□□ -1.29
PMS1P54277 LAMTOR3P2-201ENST00000504479 232 ntBASIC7.02□□□□□ -1.29
PMS1P54277 AC108866.1-204ENST00000508362 558 ntTSL 4 BASIC7.02□□□□□ -1.29
PMS1P54277 AC008708.1-201ENST00000517346 474 ntTSL 3 BASIC7.02□□□□□ -1.29
PMS1P54277 TPT1-AS1-206ENST00000519454 709 ntTSL 5 BASIC7.02□□□□□ -1.29
PMS1P54277 COX6B1P4-201ENST00000519826 484 ntBASIC7.02□□□□□ -1.29
PMS1P54277 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC7.02□□□□□ -1.29
PMS1P54277 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC7.02□□□□□ -1.29
PMS1P54277 AF235103.1-201ENST00000530223 439 ntTSL 3 BASIC7.02□□□□□ -1.29
PMS1P54277 AP002833.2-201ENST00000531585 462 ntTSL 3 BASIC7.02□□□□□ -1.29
PMS1P54277 PATE4-203ENST00000534411 897 ntAPPRIS ALT2 TSL 1 (best) BASIC7.02□□□□□ -1.29
PMS1P54277 CLEC2B-202ENST00000538152 745 ntTSL 2 BASIC7.02□□□□□ -1.29
PMS1P54277 AC090115.2-201ENST00000548060 883 ntBASIC7.02□□□□□ -1.29
PMS1P54277 AC090888.1-201ENST00000561335 1141 ntBASIC7.02□□□□□ -1.29
PMS1P54277 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC7.02□□□□□ -1.29
PMS1P54277 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC7.02□□□□□ -1.29
PMS1P54277 TTC39C-204ENST00000577185 533 ntTSL 3 BASIC7.02□□□□□ -1.29
PMS1P54277 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC7.02□□□□□ -1.29
PMS1P54277 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 78.9 ms