Protein–RNA interactions for Protein: P49662

CASP4, Caspase-4, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4P49662 CASC19-260ENST00000641828 2001 ntBASIC6.02□□□□□ -1.45
CASP4P49662 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC6.02□□□□□ -1.45
CASP4P49662 AL353796.1-201ENST00000561542 3241 ntBASIC6.02□□□□□ -1.45
CASP4P49662 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
CASP4P49662 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC6.02□□□□□ -1.45
CASP4P49662 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
CASP4P49662 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC6.01□□□□□ -1.45
CASP4P49662 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
CASP4P49662 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
CASP4P49662 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
CASP4P49662 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
CASP4P49662 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
CASP4P49662 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
CASP4P49662 HBG1-201ENST00000330597 808 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
CASP4P49662 RN7SKP145-201ENST00000363291 303 ntBASIC6.01□□□□□ -1.45
CASP4P49662 RNU11-201ENST00000387069 134 ntBASIC6.01□□□□□ -1.45
CASP4P49662 GAPDHP42-201ENST00000406848 981 ntBASIC6.01□□□□□ -1.45
CASP4P49662 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC6.01□□□□□ -1.45
CASP4P49662 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC6.01□□□□□ -1.45
CASP4P49662 AC073465.2-201ENST00000440938 498 ntBASIC6.01□□□□□ -1.45
CASP4P49662 AC092106.1-201ENST00000444291 373 ntBASIC6.01□□□□□ -1.45
CASP4P49662 AC023271.1-201ENST00000445936 1090 ntBASIC6.01□□□□□ -1.45
CASP4P49662 AC073909.1-201ENST00000447112 999 ntBASIC6.01□□□□□ -1.45
CASP4P49662 IGBP1P3-201ENST00000447449 1000 ntBASIC6.01□□□□□ -1.45
CASP4P49662 CRNDE-201ENST00000501177 614 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
CASP4P49662 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC6.01□□□□□ -1.45
CASP4P49662 UGT2A3P7-201ENST00000510485 734 ntBASIC6.01□□□□□ -1.45
CASP4P49662 AC091912.1-201ENST00000511351 248 ntBASIC6.01□□□□□ -1.45
CASP4P49662 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC6.01□□□□□ -1.45
CASP4P49662 AC097173.2-201ENST00000518701 474 ntTSL 3 BASIC6.01□□□□□ -1.45
CASP4P49662 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC6.01□□□□□ -1.45
CASP4P49662 AC079064.1-201ENST00000528365 362 ntBASIC6.01□□□□□ -1.45
CASP4P49662 RBM22P12-201ENST00000567098 1255 ntBASIC6.01□□□□□ -1.45
CASP4P49662 H3F3BP2-201ENST00000583907 357 ntBASIC6.01□□□□□ -1.45
CASP4P49662 AL360012.1-201ENST00000602813 131 ntBASIC6.01□□□□□ -1.45
CASP4P49662 Metazoa_SRP.207-201ENST00000612254 285 ntBASIC6.01□□□□□ -1.45
CASP4P49662 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC6.01□□□□□ -1.45
CASP4P49662 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
CASP4P49662 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
CASP4P49662 AC079097.1-201ENST00000512187 1399 ntBASIC6.01□□□□□ -1.45
CASP4P49662 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC6.01□□□□□ -1.45
CASP4P49662 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
CASP4P49662 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC6.01□□□□□ -1.45
CASP4P49662 AL121839.2-201ENST00000565058 6943 ntBASIC6.01□□□□□ -1.45
CASP4P49662 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
CASP4P49662 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
CASP4P49662 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC6.01□□□□□ -1.45
CASP4P49662 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC6.01□□□□□ -1.45
CASP4P49662 AL132656.3-201ENST00000606384 1595 ntBASIC6.01□□□□□ -1.45
CASP4P49662 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC6.01□□□□□ -1.45
CASP4P49662 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
CASP4P49662 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC6.01□□□□□ -1.45
CASP4P49662 GPR18-201ENST00000340807 1698 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
CASP4P49662 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC6.01□□□□□ -1.45
CASP4P49662 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
CASP4P49662 ATP5A1P1-201ENST00000454088 1321 ntBASIC6□□□□□ -1.45
CASP4P49662 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC6□□□□□ -1.45
CASP4P49662 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC6□□□□□ -1.45
CASP4P49662 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
CASP4P49662 TEK-205ENST00000615002 4666 ntTSL 5 BASIC6□□□□□ -1.45
CASP4P49662 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC6□□□□□ -1.45
CASP4P49662 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC6□□□□□ -1.45
CASP4P49662 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC6□□□□□ -1.45
CASP4P49662 AC016745.2-201ENST00000608834 3443 ntBASIC6□□□□□ -1.45
CASP4P49662 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC6□□□□□ -1.45
CASP4P49662 OR11H1-201ENST00000252835 982 ntAPPRIS P1 BASIC6□□□□□ -1.45
CASP4P49662 RN7SKP28-201ENST00000364770 305 ntBASIC6□□□□□ -1.45
CASP4P49662 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC6□□□□□ -1.45
CASP4P49662 RN7SKP286-201ENST00000410894 299 ntBASIC6□□□□□ -1.45
CASP4P49662 TNPO1P1-201ENST00000423641 1138 ntBASIC6□□□□□ -1.45
CASP4P49662 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC6□□□□□ -1.45
CASP4P49662 AC012075.1-201ENST00000436549 580 ntBASIC6□□□□□ -1.45
CASP4P49662 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC6□□□□□ -1.45
CASP4P49662 AL359265.1-201ENST00000440296 795 ntBASIC6□□□□□ -1.45
CASP4P49662 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC6□□□□□ -1.45
CASP4P49662 RN7SL188P-201ENST00000469842 285 ntBASIC6□□□□□ -1.45
CASP4P49662 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC6□□□□□ -1.45
CASP4P49662 AC010451.1-201ENST00000509057 556 ntTSL 3 BASIC6□□□□□ -1.45
CASP4P49662 SEPT10P1-201ENST00000517342 1162 ntBASIC6□□□□□ -1.45
CASP4P49662 IGHVIII-47-1-201ENST00000518187 331 ntBASIC6□□□□□ -1.45
CASP4P49662 OR11H3P-201ENST00000554547 982 ntBASIC6□□□□□ -1.45
CASP4P49662 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC6□□□□□ -1.45
CASP4P49662 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC6□□□□□ -1.45
CASP4P49662 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC6□□□□□ -1.45
CASP4P49662 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC6□□□□□ -1.45
CASP4P49662 SNORD95-201ENST00000579879 68 ntBASIC6□□□□□ -1.45
CASP4P49662 MIR1273E-201ENST00000581165 102 ntBASIC6□□□□□ -1.45
CASP4P49662 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC6□□□□□ -1.45
CASP4P49662 AC012616.1-201ENST00000600294 197 ntBASIC6□□□□□ -1.45
CASP4P49662 FO393422.1-201ENST00000603908 708 ntBASIC6□□□□□ -1.45
CASP4P49662 AL139041.1-201ENST00000605480 610 ntBASIC6□□□□□ -1.45
CASP4P49662 AL139124.1-201ENST00000609123 421 ntBASIC6□□□□□ -1.45
CASP4P49662 AC135068.5-201ENST00000624197 983 ntBASIC6□□□□□ -1.45
CASP4P49662 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC6□□□□□ -1.45
CASP4P49662 AP000550.3-201ENST00000637734 379 ntBASIC6□□□□□ -1.45
CASP4P49662 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC6□□□□□ -1.45
CASP4P49662 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC6□□□□□ -1.45
CASP4P49662 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
CASP4P49662 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC6□□□□□ -1.45
CASP4P49662 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC6□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 84.9 ms