Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 AC022467.1-201ENST00000614738 749 ntBASIC5.95□□□□□ -1.46
LHX1P48742 AC107905.1-201ENST00000616204 426 ntBASIC5.95□□□□□ -1.46
LHX1P48742 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
LHX1P48742 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
LHX1P48742 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC5.95□□□□□ -1.46
LHX1P48742 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
LHX1P48742 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC5.95□□□□□ -1.46
LHX1P48742 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC5.95□□□□□ -1.46
LHX1P48742 AP002478.1-201ENST00000577848 1455 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
LHX1P48742 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
LHX1P48742 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
LHX1P48742 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC5.95□□□□□ -1.46
LHX1P48742 FBXO3-213ENST00000534136 3217 ntTSL 5 BASIC5.95□□□□□ -1.46
LHX1P48742 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
LHX1P48742 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
LHX1P48742 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
LHX1P48742 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC5.94□□□□□ -1.46
LHX1P48742 MTCO1P8-201ENST00000416914 1523 ntBASIC5.94□□□□□ -1.46
LHX1P48742 OR5AQ1P-202ENST00000641257 1534 ntBASIC5.94□□□□□ -1.46
LHX1P48742 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
LHX1P48742 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
LHX1P48742 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC5.94□□□□□ -1.46
LHX1P48742 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC5.94□□□□□ -1.46
LHX1P48742 AC087516.1-201ENST00000561236 2428 ntBASIC5.94□□□□□ -1.46
LHX1P48742 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC5.94□□□□□ -1.46
LHX1P48742 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
LHX1P48742 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC5.94□□□□□ -1.46
LHX1P48742 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
LHX1P48742 STK3-216ENST00000523601 3107 ntTSL 2 BASIC5.94□□□□□ -1.46
LHX1P48742 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
LHX1P48742 AL121886.1-201ENST00000358609 435 ntBASIC5.94□□□□□ -1.46
LHX1P48742 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
LHX1P48742 SH3BGR-203ENST00000380634 816 ntTSL 5 BASIC5.94□□□□□ -1.46
LHX1P48742 AC005042.1-201ENST00000393397 800 ntBASIC5.94□□□□□ -1.46
LHX1P48742 RN7SKP229-201ENST00000410465 302 ntBASIC5.94□□□□□ -1.46
LHX1P48742 AC096921.1-201ENST00000411661 375 ntBASIC5.94□□□□□ -1.46
LHX1P48742 Z93019.1-201ENST00000416450 973 ntBASIC5.94□□□□□ -1.46
LHX1P48742 OR6D1P-201ENST00000436165 939 ntBASIC5.94□□□□□ -1.46
LHX1P48742 RN7SL51P-201ENST00000468230 285 ntBASIC5.94□□□□□ -1.46
LHX1P48742 AC100832.1-201ENST00000471945 383 ntBASIC5.94□□□□□ -1.46
LHX1P48742 RN7SL583P-201ENST00000475692 287 ntBASIC5.94□□□□□ -1.46
LHX1P48742 EIF3LP3-201ENST00000495197 822 ntBASIC5.94□□□□□ -1.46
LHX1P48742 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC5.94□□□□□ -1.46
LHX1P48742 AC097491.1-201ENST00000507857 672 ntTSL 5 BASIC5.94□□□□□ -1.46
LHX1P48742 BX510359.5-201ENST00000515651 304 ntBASIC5.94□□□□□ -1.46
LHX1P48742 RNU6-551P-201ENST00000516661 103 ntBASIC5.94□□□□□ -1.46
LHX1P48742 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC5.94□□□□□ -1.46
LHX1P48742 IGKV2-18-201ENST00000522607 343 ntBASIC5.94□□□□□ -1.46
LHX1P48742 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC5.94□□□□□ -1.46
LHX1P48742 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC5.94□□□□□ -1.46
LHX1P48742 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC5.94□□□□□ -1.46
LHX1P48742 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC5.94□□□□□ -1.46
LHX1P48742 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC5.94□□□□□ -1.46
LHX1P48742 AC107993.1-201ENST00000591343 684 ntBASIC5.94□□□□□ -1.46
LHX1P48742 AC090953.1-201ENST00000604305 1092 ntBASIC5.94□□□□□ -1.46
LHX1P48742 AP000894.4-201ENST00000610185 483 ntBASIC5.94□□□□□ -1.46
LHX1P48742 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC5.94□□□□□ -1.46
LHX1P48742 MIR8080-201ENST00000622224 89 ntBASIC5.94□□□□□ -1.46
LHX1P48742 CU638689.1-201ENST00000623225 897 ntTSL 3 BASIC5.94□□□□□ -1.46
LHX1P48742 CU634019.4-201ENST00000623347 897 ntTSL 3 BASIC5.94□□□□□ -1.46
LHX1P48742 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
LHX1P48742 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC5.94□□□□□ -1.46
LHX1P48742 TTC39B-207ENST00000507993 1950 ntAPPRIS ALT2 TSL 2 BASIC5.94□□□□□ -1.46
LHX1P48742 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
LHX1P48742 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC5.94□□□□□ -1.46
LHX1P48742 GABRG2-228ENST00000640985 3086 ntTSL 5 BASIC5.94□□□□□ -1.46
LHX1P48742 CADM2-202ENST00000405615 1314 ntAPPRIS P3 TSL 1 (best) BASIC5.94□□□□□ -1.46
LHX1P48742 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC5.94□□□□□ -1.46
LHX1P48742 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
LHX1P48742 AC007159.1-201ENST00000566529 4706 ntBASIC5.94□□□□□ -1.46
LHX1P48742 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC5.94□□□□□ -1.46
LHX1P48742 AC130360.2-201ENST00000533477 1556 ntBASIC5.93□□□□□ -1.46
LHX1P48742 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
LHX1P48742 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
LHX1P48742 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC5.93□□□□□ -1.46
LHX1P48742 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC5.93□□□□□ -1.46
LHX1P48742 BPHL-201ENST00000380368 797 ntTSL 5 BASIC5.93□□□□□ -1.46
LHX1P48742 OR10T1P-201ENST00000424327 947 ntBASIC5.93□□□□□ -1.46
LHX1P48742 AC242426.1-201ENST00000435270 960 ntBASIC5.93□□□□□ -1.46
LHX1P48742 BX679664.2-201ENST00000439282 283 ntBASIC5.93□□□□□ -1.46
LHX1P48742 H3F3BP1-201ENST00000440551 403 ntBASIC5.93□□□□□ -1.46
LHX1P48742 CYCSP51-201ENST00000443545 318 ntBASIC5.93□□□□□ -1.46
LHX1P48742 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC5.93□□□□□ -1.46
LHX1P48742 LINC01456-201ENST00000453902 708 ntTSL 3 BASIC5.93□□□□□ -1.46
LHX1P48742 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC5.93□□□□□ -1.46
LHX1P48742 SNORD125-201ENST00000459538 96 ntBASIC5.93□□□□□ -1.46
LHX1P48742 RPL35AP19-201ENST00000469425 329 ntBASIC5.93□□□□□ -1.46
LHX1P48742 SIAH1P1-201ENST00000479411 923 ntBASIC5.93□□□□□ -1.46
LHX1P48742 RN7SL184P-201ENST00000488308 297 ntBASIC5.93□□□□□ -1.46
LHX1P48742 NECTIN3-AS1-205ENST00000491709 792 ntTSL 3 BASIC5.93□□□□□ -1.46
LHX1P48742 OR2A3P-201ENST00000493774 953 ntBASIC5.93□□□□□ -1.46
LHX1P48742 AC090638.1-201ENST00000498296 909 ntBASIC5.93□□□□□ -1.46
LHX1P48742 RN7SKP253-201ENST00000516424 309 ntBASIC5.93□□□□□ -1.46
LHX1P48742 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC5.93□□□□□ -1.46
LHX1P48742 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC5.93□□□□□ -1.46
LHX1P48742 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC5.93□□□□□ -1.46
LHX1P48742 AC104241.1-201ENST00000530039 628 ntTSL 3 BASIC5.93□□□□□ -1.46
LHX1P48742 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
LHX1P48742 EIF1AXP2-201ENST00000555940 413 ntBASIC5.93□□□□□ -1.46
LHX1P48742 TMEM202-202ENST00000567679 588 ntAPPRIS ALT2 TSL 2 BASIC5.93□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 84.1 ms