Protein–RNA interactions for Protein: P47902

CDX1, Homeobox protein CDX-1, humanhuman

Predicted RBP Predictions only

Length 265 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1P47902 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
CDX1P47902 AP002004.1-203ENST00000531091 1768 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
CDX1P47902 AC016583.1-201ENST00000624221 2431 ntBASIC4.93□□□□□ -1.62
CDX1P47902 CNIH1-201ENST00000216416 4793 ntAPPRIS P2 TSL 1 (best) BASIC4.93□□□□□ -1.62
CDX1P47902 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC4.93□□□□□ -1.62
CDX1P47902 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
CDX1P47902 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
CDX1P47902 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
CDX1P47902 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
CDX1P47902 AC026523.2-201ENST00000625039 7739 ntBASIC4.93□□□□□ -1.62
CDX1P47902 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC4.92□□□□□ -1.62
CDX1P47902 CDH18-210ENST00000511273 2318 ntTSL 5 BASIC4.92□□□□□ -1.62
CDX1P47902 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC4.92□□□□□ -1.62
CDX1P47902 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC4.92□□□□□ -1.62
CDX1P47902 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC4.92□□□□□ -1.62
CDX1P47902 AC132825.1-201ENST00000463573 2247 ntBASIC4.92□□□□□ -1.62
CDX1P47902 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
CDX1P47902 ZNF735-201ENST00000429565 1570 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
CDX1P47902 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC4.92□□□□□ -1.62
CDX1P47902 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC4.92□□□□□ -1.62
CDX1P47902 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
CDX1P47902 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
CDX1P47902 OR1D2-201ENST00000331459 939 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
CDX1P47902 RNA5SP279-201ENST00000365513 117 ntBASIC4.92□□□□□ -1.62
CDX1P47902 AL157702.1-201ENST00000398764 426 ntBASIC4.92□□□□□ -1.62
CDX1P47902 AC104777.1-202ENST00000413247 774 ntTSL 5 BASIC4.92□□□□□ -1.62
CDX1P47902 RANP4-201ENST00000413361 655 ntBASIC4.92□□□□□ -1.62
CDX1P47902 TEX50-201ENST00000417563 821 ntAPPRIS P1 TSL 2 BASIC4.92□□□□□ -1.62
CDX1P47902 RPA2P2-201ENST00000419698 796 ntBASIC4.92□□□□□ -1.62
CDX1P47902 FAM53B-AS1-201ENST00000432699 558 ntTSL 2 BASIC4.92□□□□□ -1.62
CDX1P47902 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC4.92□□□□□ -1.62
CDX1P47902 AC092106.1-201ENST00000444291 373 ntBASIC4.92□□□□□ -1.62
CDX1P47902 AC113331.2-201ENST00000445557 926 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
CDX1P47902 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC4.92□□□□□ -1.62
CDX1P47902 AC011625.1-201ENST00000455442 526 ntTSL 4 BASIC4.92□□□□□ -1.62
CDX1P47902 HSPE1P22-201ENST00000456856 327 ntBASIC4.92□□□□□ -1.62
CDX1P47902 RARRES2P3-201ENST00000457739 473 ntBASIC4.92□□□□□ -1.62
CDX1P47902 AC104339.1-201ENST00000465478 348 ntBASIC4.92□□□□□ -1.62
CDX1P47902 AC092590.1-201ENST00000471672 737 ntTSL 3 BASIC4.92□□□□□ -1.62
CDX1P47902 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC4.92□□□□□ -1.62
CDX1P47902 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC4.92□□□□□ -1.62
CDX1P47902 AC023424.1-201ENST00000496058 459 ntBASIC4.92□□□□□ -1.62
CDX1P47902 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC4.92□□□□□ -1.62
CDX1P47902 ZCCHC10-203ENST00000504170 325 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
CDX1P47902 LINC01386-201ENST00000506196 440 ntTSL 3 BASIC4.92□□□□□ -1.62
CDX1P47902 AC105919.1-201ENST00000507203 393 ntTSL 3 BASIC4.92□□□□□ -1.62
CDX1P47902 AC095052.1-201ENST00000509955 863 ntBASIC4.92□□□□□ -1.62
CDX1P47902 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC4.92□□□□□ -1.62
CDX1P47902 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
CDX1P47902 AC111000.6-201ENST00000514471 709 ntBASIC4.92□□□□□ -1.62
CDX1P47902 AC246817.1-201ENST00000520024 610 ntTSL 3 BASIC4.92□□□□□ -1.62
CDX1P47902 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
CDX1P47902 IFNG-AS1-203ENST00000541715 902 ntTSL 3 BASIC4.92□□□□□ -1.62
CDX1P47902 UBE2N-204ENST00000549833 960 ntTSL 3 BASIC4.92□□□□□ -1.62
CDX1P47902 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC4.92□□□□□ -1.62
CDX1P47902 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC4.92□□□□□ -1.62
CDX1P47902 AC002310.3-201ENST00000569728 723 ntBASIC4.92□□□□□ -1.62
CDX1P47902 AC008914.1-201ENST00000576302 797 ntTSL 3 BASIC4.92□□□□□ -1.62
CDX1P47902 MIR4675-201ENST00000577898 77 ntBASIC4.92□□□□□ -1.62
CDX1P47902 MIR4502-201ENST00000580432 81 ntBASIC4.92□□□□□ -1.62
CDX1P47902 TVP23B-209ENST00000581733 1258 ntTSL 5 BASIC4.92□□□□□ -1.62
CDX1P47902 AC233702.7-202ENST00000582941 211 ntBASIC4.92□□□□□ -1.62
CDX1P47902 AC005242.1-201ENST00000585658 438 ntBASIC4.92□□□□□ -1.62
CDX1P47902 AC018761.4-201ENST00000585742 272 ntTSL 3 BASIC4.92□□□□□ -1.62
CDX1P47902 AC005332.4-201ENST00000592752 579 ntBASIC4.92□□□□□ -1.62
CDX1P47902 COX6CP7-201ENST00000597056 208 ntBASIC4.92□□□□□ -1.62
CDX1P47902 AC073575.2-201ENST00000614212 627 ntBASIC4.92□□□□□ -1.62
CDX1P47902 AL356094.1-201ENST00000624663 1212 ntBASIC4.92□□□□□ -1.62
CDX1P47902 AL357140.4-201ENST00000636827 412 ntBASIC4.92□□□□□ -1.62
CDX1P47902 OR2AK2-202ENST00000641852 1008 ntAPPRIS P2 BASIC4.92□□□□□ -1.62
CDX1P47902 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
CDX1P47902 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC4.92□□□□□ -1.62
CDX1P47902 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC4.92□□□□□ -1.62
CDX1P47902 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC4.92□□□□□ -1.62
CDX1P47902 RRH-201ENST00000317735 1455 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
CDX1P47902 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC4.92□□□□□ -1.62
CDX1P47902 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC4.92□□□□□ -1.62
CDX1P47902 AL591135.1-201ENST00000401578 5914 ntBASIC4.92□□□□□ -1.62
CDX1P47902 FGF1-213ENST00000610990 3802 ntAPPRIS P1 TSL 4 BASIC4.92□□□□□ -1.62
CDX1P47902 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
CDX1P47902 ZNF138-206ENST00000440598 2230 ntTSL 2 BASIC4.92□□□□□ -1.62
CDX1P47902 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
CDX1P47902 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
CDX1P47902 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC4.92□□□□□ -1.62
CDX1P47902 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC4.92□□□□□ -1.62
CDX1P47902 INTS12-211ENST00000618810 1502 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
CDX1P47902 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
CDX1P47902 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
CDX1P47902 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC4.92□□□□□ -1.62
CDX1P47902 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
CDX1P47902 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
CDX1P47902 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
CDX1P47902 AC007342.7-201ENST00000624610 2337 ntBASIC4.91□□□□□ -1.62
CDX1P47902 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC4.91□□□□□ -1.62
CDX1P47902 BABAM2-206ENST00000379632 1752 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
CDX1P47902 P2RY14-202ENST00000424796 1780 ntAPPRIS P1 TSL 2 BASIC4.91□□□□□ -1.62
CDX1P47902 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
CDX1P47902 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
CDX1P47902 AC010894.3-202ENST00000412835 1405 ntTSL 2 BASIC4.91□□□□□ -1.62
CDX1P47902 RBPJP2-201ENST00000618187 1444 ntBASIC4.91□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 134.7 ms