Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 RNU1-77P-201ENST00000390868 162 ntBASIC6.47□□□□□ -1.37
NEDD4P46934 AC017048.1-201ENST00000412153 495 ntTSL 2 BASIC6.47□□□□□ -1.37
NEDD4P46934 RPL35AP24-201ENST00000413846 330 ntBASIC6.47□□□□□ -1.37
NEDD4P46934 Z93019.1-201ENST00000416450 973 ntBASIC6.47□□□□□ -1.37
NEDD4P46934 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC6.47□□□□□ -1.37
NEDD4P46934 IGBP1P3-201ENST00000447449 1000 ntBASIC6.47□□□□□ -1.37
NEDD4P46934 AC007386.1-201ENST00000455212 582 ntBASIC6.47□□□□□ -1.37
NEDD4P46934 RPSAP51-201ENST00000497462 645 ntBASIC6.47□□□□□ -1.37
NEDD4P46934 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC6.47□□□□□ -1.37
NEDD4P46934 AC106732.1-201ENST00000512458 550 ntTSL 4 BASIC6.47□□□□□ -1.37
NEDD4P46934 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC6.47□□□□□ -1.37
NEDD4P46934 OR11H3P-201ENST00000554547 982 ntBASIC6.47□□□□□ -1.37
NEDD4P46934 C16orf52-205ENST00000567004 951 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
NEDD4P46934 RBM22P1-201ENST00000578589 1214 ntBASIC6.47□□□□□ -1.37
NEDD4P46934 AC005840.5-201ENST00000619166 599 ntBASIC6.47□□□□□ -1.37
NEDD4P46934 AC135068.5-201ENST00000624197 983 ntBASIC6.47□□□□□ -1.37
NEDD4P46934 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC6.47□□□□□ -1.37
NEDD4P46934 GVINP1-201ENST00000526769 8438 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
NEDD4P46934 AC020656.2-201ENST00000613291 5309 ntBASIC6.47□□□□□ -1.37
NEDD4P46934 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
NEDD4P46934 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
NEDD4P46934 CCDC125-201ENST00000383374 2006 ntTSL 5 BASIC6.46□□□□□ -1.37
NEDD4P46934 ATP5A1P1-201ENST00000454088 1321 ntBASIC6.46□□□□□ -1.37
NEDD4P46934 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC6.46□□□□□ -1.37
NEDD4P46934 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC6.46□□□□□ -1.37
NEDD4P46934 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC6.46□□□□□ -1.37
NEDD4P46934 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC6.46□□□□□ -1.37
NEDD4P46934 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
NEDD4P46934 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC6.46□□□□□ -1.38
NEDD4P46934 CASC19-248ENST00000641674 1356 ntBASIC6.46□□□□□ -1.38
NEDD4P46934 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
NEDD4P46934 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC6.46□□□□□ -1.38
NEDD4P46934 TMED3-202ENST00000424155 16555 ntTSL 3 BASIC6.46□□□□□ -1.38
NEDD4P46934 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC6.46□□□□□ -1.38
NEDD4P46934 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC6.46□□□□□ -1.38
NEDD4P46934 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.38
NEDD4P46934 CLEC12A-202ENST00000350667 699 ntAPPRIS ALT2 TSL 1 (best) BASIC6.46□□□□□ -1.38
NEDD4P46934 RNA5SP335-201ENST00000363817 110 ntBASIC6.46□□□□□ -1.38
NEDD4P46934 AP001610.2-201ENST00000415820 422 ntTSL 3 BASIC6.46□□□□□ -1.38
NEDD4P46934 AL354766.1-201ENST00000423396 542 ntBASIC6.46□□□□□ -1.38
NEDD4P46934 SRSF1P1-201ENST00000424058 520 ntBASIC6.46□□□□□ -1.38
NEDD4P46934 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC6.46□□□□□ -1.38
NEDD4P46934 AC138761.5-201ENST00000433967 325 ntBASIC6.46□□□□□ -1.38
NEDD4P46934 CYCSP12-201ENST00000437729 300 ntBASIC6.46□□□□□ -1.38
NEDD4P46934 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC6.46□□□□□ -1.38
NEDD4P46934 RPS26P41-201ENST00000450370 284 ntBASIC6.46□□□□□ -1.38
NEDD4P46934 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC6.46□□□□□ -1.38
NEDD4P46934 OR2AF1P-201ENST00000454899 889 ntBASIC6.46□□□□□ -1.38
NEDD4P46934 AC011225.1-201ENST00000457751 369 ntBASIC6.46□□□□□ -1.38
NEDD4P46934 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
NEDD4P46934 RPEP1-201ENST00000504507 658 ntBASIC6.46□□□□□ -1.38
NEDD4P46934 OSMR-AS1-201ENST00000506463 800 ntTSL 3 BASIC6.46□□□□□ -1.38
NEDD4P46934 ATP5LP3-201ENST00000514223 304 ntBASIC6.46□□□□□ -1.38
NEDD4P46934 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC6.46□□□□□ -1.38
NEDD4P46934 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC6.46□□□□□ -1.38
NEDD4P46934 BLZF2P-201ENST00000553776 1130 ntBASIC6.46□□□□□ -1.38
NEDD4P46934 CDC42EP3P1-201ENST00000601004 764 ntBASIC6.46□□□□□ -1.38
NEDD4P46934 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
NEDD4P46934 IGLCOR22-2-201ENST00000605398 313 ntBASIC6.46□□□□□ -1.38
NEDD4P46934 AC022467.1-201ENST00000614738 749 ntBASIC6.46□□□□□ -1.38
NEDD4P46934 MIR6133-201ENST00000617057 108 ntBASIC6.46□□□□□ -1.38
NEDD4P46934 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC6.46□□□□□ -1.38
NEDD4P46934 AL359715.3-201ENST00000569267 2123 ntBASIC6.45□□□□□ -1.38
NEDD4P46934 AL592429.1-201ENST00000403909 1473 ntBASIC6.45□□□□□ -1.38
NEDD4P46934 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
NEDD4P46934 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC6.45□□□□□ -1.38
NEDD4P46934 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC6.45□□□□□ -1.38
NEDD4P46934 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC6.45□□□□□ -1.38
NEDD4P46934 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
NEDD4P46934 CYP4Z2P-201ENST00000423332 1512 ntBASIC6.45□□□□□ -1.38
NEDD4P46934 MTCO1P11-201ENST00000429111 1528 ntBASIC6.45□□□□□ -1.38
NEDD4P46934 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
NEDD4P46934 LINC01951-201ENST00000377300 1925 ntTSL 2 BASIC6.45□□□□□ -1.38
NEDD4P46934 THRB-203ENST00000396671 7506 ntAPPRIS P2 TSL 5 BASIC6.45□□□□□ -1.38
NEDD4P46934 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC6.45□□□□□ -1.38
NEDD4P46934 NLRP3P1-201ENST00000622303 1785 ntBASIC6.45□□□□□ -1.38
NEDD4P46934 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
NEDD4P46934 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
NEDD4P46934 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
NEDD4P46934 SNORA51.1-201ENST00000363243 140 ntBASIC6.45□□□□□ -1.38
NEDD4P46934 RN7SKP160-201ENST00000363804 340 ntBASIC6.45□□□□□ -1.38
NEDD4P46934 SNORD56.6-201ENST00000384569 71 ntBASIC6.45□□□□□ -1.38
NEDD4P46934 MIR143-201ENST00000385300 106 ntBASIC6.45□□□□□ -1.38
NEDD4P46934 U3.28-201ENST00000391249 210 ntBASIC6.45□□□□□ -1.38
NEDD4P46934 AL391361.1-201ENST00000405580 489 ntBASIC6.45□□□□□ -1.38
NEDD4P46934 OR4K12P-201ENST00000406538 961 ntBASIC6.45□□□□□ -1.38
NEDD4P46934 RN7SKP59-201ENST00000410520 314 ntBASIC6.45□□□□□ -1.38
NEDD4P46934 RPL5P2-201ENST00000429598 854 ntBASIC6.45□□□□□ -1.38
NEDD4P46934 NPM1P18-201ENST00000434232 732 ntBASIC6.45□□□□□ -1.38
NEDD4P46934 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC6.45□□□□□ -1.38
NEDD4P46934 KRTAP8-2P-201ENST00000440620 186 ntBASIC6.45□□□□□ -1.38
NEDD4P46934 AL035443.1-202ENST00000442841 586 ntTSL 2 BASIC6.45□□□□□ -1.38
NEDD4P46934 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC6.45□□□□□ -1.38
NEDD4P46934 AC114982.2-201ENST00000461396 358 ntBASIC6.45□□□□□ -1.38
NEDD4P46934 RN7SL51P-201ENST00000468230 285 ntBASIC6.45□□□□□ -1.38
NEDD4P46934 AC108693.1-201ENST00000496068 432 ntBASIC6.45□□□□□ -1.38
NEDD4P46934 CCDC169-211ENST00000503173 837 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
NEDD4P46934 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC6.45□□□□□ -1.38
NEDD4P46934 MTND6P2-201ENST00000512226 524 ntBASIC6.45□□□□□ -1.38
NEDD4P46934 RN7SKP99-201ENST00000517028 307 ntBASIC6.45□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 82.2 ms