Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC5.26□□□□□ -1.57
RFC3P40938 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
RFC3P40938 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC5.26□□□□□ -1.57
RFC3P40938 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
RFC3P40938 RALGAPA1P1-201ENST00000443361 6232 ntBASIC5.26□□□□□ -1.57
RFC3P40938 AL603750.1-201ENST00000624216 1717 ntBASIC5.26□□□□□ -1.57
RFC3P40938 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
RFC3P40938 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
RFC3P40938 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
RFC3P40938 AC114786.1-201ENST00000512892 1415 ntBASIC5.25□□□□□ -1.57
RFC3P40938 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
RFC3P40938 AL359955.1-201ENST00000455242 3275 ntBASIC5.25□□□□□ -1.57
RFC3P40938 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
RFC3P40938 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
RFC3P40938 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
RFC3P40938 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
RFC3P40938 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
RFC3P40938 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
RFC3P40938 AL159987.1-201ENST00000347911 293 ntBASIC5.25□□□□□ -1.57
RFC3P40938 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
RFC3P40938 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC5.25□□□□□ -1.57
RFC3P40938 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC5.25□□□□□ -1.57
RFC3P40938 AL391361.1-201ENST00000405580 489 ntBASIC5.25□□□□□ -1.57
RFC3P40938 OR3A2-201ENST00000408891 1076 ntBASIC5.25□□□□□ -1.57
RFC3P40938 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
RFC3P40938 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC5.25□□□□□ -1.57
RFC3P40938 Z68694.1-201ENST00000413929 841 ntBASIC5.25□□□□□ -1.57
RFC3P40938 RANP7-201ENST00000418085 644 ntBASIC5.25□□□□□ -1.57
RFC3P40938 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC5.25□□□□□ -1.57
RFC3P40938 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC5.25□□□□□ -1.57
RFC3P40938 NAP1L4P3-201ENST00000432820 1147 ntBASIC5.25□□□□□ -1.57
RFC3P40938 KRTAP8-2P-201ENST00000440620 186 ntBASIC5.25□□□□□ -1.57
RFC3P40938 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC5.25□□□□□ -1.57
RFC3P40938 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC5.25□□□□□ -1.57
RFC3P40938 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC5.25□□□□□ -1.57
RFC3P40938 OARD1-211ENST00000480585 829 ntTSL 3 BASIC5.25□□□□□ -1.57
RFC3P40938 RPS4XP14-201ENST00000493072 781 ntBASIC5.25□□□□□ -1.57
RFC3P40938 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC5.25□□□□□ -1.57
RFC3P40938 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC5.25□□□□□ -1.57
RFC3P40938 ATP5LP3-201ENST00000514223 304 ntBASIC5.25□□□□□ -1.57
RFC3P40938 CYP4F27P-201ENST00000514557 494 ntBASIC5.25□□□□□ -1.57
RFC3P40938 RNU6-1334P-201ENST00000516032 105 ntBASIC5.25□□□□□ -1.57
RFC3P40938 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC5.25□□□□□ -1.57
RFC3P40938 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC5.25□□□□□ -1.57
RFC3P40938 GMDS-AS1-212ENST00000534160 720 ntTSL 3 BASIC5.25□□□□□ -1.57
RFC3P40938 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC5.25□□□□□ -1.57
RFC3P40938 AL049872.1-201ENST00000556323 322 ntBASIC5.25□□□□□ -1.57
RFC3P40938 AC105036.1-201ENST00000566222 271 ntBASIC5.25□□□□□ -1.57
RFC3P40938 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC5.25□□□□□ -1.57
RFC3P40938 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC5.25□□□□□ -1.57
RFC3P40938 GMFG-212ENST00000602185 423 ntTSL 3 BASIC5.25□□□□□ -1.57
RFC3P40938 AP000864.1-201ENST00000609424 650 ntBASIC5.25□□□□□ -1.57
RFC3P40938 HOTTIP_3.1-201ENST00000619957 337 ntBASIC5.25□□□□□ -1.57
RFC3P40938 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
RFC3P40938 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
RFC3P40938 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
RFC3P40938 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
RFC3P40938 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
RFC3P40938 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
RFC3P40938 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
RFC3P40938 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
RFC3P40938 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
RFC3P40938 AC130304.1-201ENST00000622942 2385 ntBASIC5.24□□□□□ -1.57
RFC3P40938 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
RFC3P40938 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
RFC3P40938 FBXL21-201ENST00000297158 1305 ntBASIC5.24□□□□□ -1.57
RFC3P40938 CIR1P2-201ENST00000514821 1342 ntBASIC5.24□□□□□ -1.57
RFC3P40938 AC239868.2-201ENST00000564237 4527 ntBASIC5.24□□□□□ -1.57
RFC3P40938 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
RFC3P40938 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
RFC3P40938 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC5.24□□□□□ -1.57
RFC3P40938 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
RFC3P40938 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
RFC3P40938 YES1P1-201ENST00000418510 1628 ntBASIC5.24□□□□□ -1.57
RFC3P40938 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
RFC3P40938 RNA5-8SP5-201ENST00000365304 152 ntBASIC5.24□□□□□ -1.57
RFC3P40938 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC5.24□□□□□ -1.57
RFC3P40938 RNA5SP187-201ENST00000384400 119 ntBASIC5.24□□□□□ -1.57
RFC3P40938 AL121977.1-201ENST00000401636 979 ntBASIC5.24□□□□□ -1.57
RFC3P40938 ZSCAN12P1-201ENST00000406489 419 ntBASIC5.24□□□□□ -1.57
RFC3P40938 NACAP7-201ENST00000407371 609 ntBASIC5.24□□□□□ -1.57
RFC3P40938 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC5.24□□□□□ -1.57
RFC3P40938 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC5.24□□□□□ -1.57
RFC3P40938 AL121878.1-201ENST00000418638 859 ntBASIC5.24□□□□□ -1.57
RFC3P40938 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC5.24□□□□□ -1.57
RFC3P40938 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC5.24□□□□□ -1.57
RFC3P40938 TNPO1P1-201ENST00000423641 1138 ntBASIC5.24□□□□□ -1.57
RFC3P40938 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC5.24□□□□□ -1.57
RFC3P40938 HMGN2P27-201ENST00000427352 270 ntBASIC5.24□□□□□ -1.57
RFC3P40938 AL022331.1-201ENST00000429025 477 ntBASIC5.24□□□□□ -1.57
RFC3P40938 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC5.24□□□□□ -1.57
RFC3P40938 AC013410.1-201ENST00000436223 1232 ntBASIC5.24□□□□□ -1.57
RFC3P40938 C21orf91-OT1-203ENST00000439392 497 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
RFC3P40938 RPL5P25-201ENST00000441148 775 ntBASIC5.24□□□□□ -1.57
RFC3P40938 EIF4A1P6-201ENST00000448133 1210 ntBASIC5.24□□□□□ -1.57
RFC3P40938 AC004129.2-201ENST00000457229 287 ntBASIC5.24□□□□□ -1.57
RFC3P40938 RNU1-88P-201ENST00000459274 128 ntBASIC5.24□□□□□ -1.57
RFC3P40938 RN7SL629P-201ENST00000489622 285 ntBASIC5.24□□□□□ -1.57
RFC3P40938 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC5.24□□□□□ -1.57
RFC3P40938 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC5.24□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 647.6 ms