Protein–RNA interactions for Protein: P33076

CIITA, MHC class II transactivator, humanhuman

Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CIITAP33076 IGLV3-24-201ENST00000517477 197 ntBASIC6.43□□□□□ -1.38
CIITAP33076 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC6.43□□□□□ -1.38
CIITAP33076 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC6.43□□□□□ -1.38
CIITAP33076 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC6.43□□□□□ -1.38
CIITAP33076 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC6.43□□□□□ -1.38
CIITAP33076 TMEM202-202ENST00000567679 588 ntAPPRIS ALT2 TSL 2 BASIC6.43□□□□□ -1.38
CIITAP33076 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC6.43□□□□□ -1.38
CIITAP33076 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC6.43□□□□□ -1.38
CIITAP33076 AL352984.2-202ENST00000613699 155 ntBASIC6.43□□□□□ -1.38
CIITAP33076 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC6.43□□□□□ -1.38
CIITAP33076 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC6.43□□□□□ -1.38
CIITAP33076 AC007683.2-201ENST00000624681 714 ntBASIC6.43□□□□□ -1.38
CIITAP33076 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
CIITAP33076 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
CIITAP33076 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC6.43□□□□□ -1.38
CIITAP33076 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
CIITAP33076 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC6.43□□□□□ -1.38
CIITAP33076 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC6.43□□□□□ -1.38
CIITAP33076 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
CIITAP33076 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
CIITAP33076 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC6.43□□□□□ -1.38
CIITAP33076 CASC19-255ENST00000641733 1385 ntBASIC6.43□□□□□ -1.38
CIITAP33076 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
CIITAP33076 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC6.42□□□□□ -1.38
CIITAP33076 ZSCAN4-201ENST00000318203 2246 ntAPPRIS P1 TSL 2 BASIC6.42□□□□□ -1.38
CIITAP33076 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
CIITAP33076 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
CIITAP33076 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
CIITAP33076 HBG1-201ENST00000330597 808 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
CIITAP33076 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC6.42□□□□□ -1.38
CIITAP33076 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC6.42□□□□□ -1.38
CIITAP33076 GAPDHP42-201ENST00000406848 981 ntBASIC6.42□□□□□ -1.38
CIITAP33076 DHFRP5-201ENST00000406944 564 ntBASIC6.42□□□□□ -1.38
CIITAP33076 AL445190.1-201ENST00000416448 288 ntTSL 5 BASIC6.42□□□□□ -1.38
CIITAP33076 RNF10P1-201ENST00000418589 369 ntBASIC6.42□□□□□ -1.38
CIITAP33076 LINC00626-201ENST00000420691 955 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
CIITAP33076 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC6.42□□□□□ -1.38
CIITAP33076 AC015923.1-201ENST00000435892 305 ntTSL 2 BASIC6.42□□□□□ -1.38
CIITAP33076 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC6.42□□□□□ -1.38
CIITAP33076 AL391987.1-201ENST00000441025 200 ntBASIC6.42□□□□□ -1.38
CIITAP33076 AC073909.1-201ENST00000447112 999 ntBASIC6.42□□□□□ -1.38
CIITAP33076 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC6.42□□□□□ -1.38
CIITAP33076 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
CIITAP33076 AC078828.1-201ENST00000471993 458 ntTSL 3 BASIC6.42□□□□□ -1.38
CIITAP33076 AC104109.1-201ENST00000498563 436 ntBASIC6.42□□□□□ -1.38
CIITAP33076 ATXN3-206ENST00000502250 1259 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
CIITAP33076 UBE2D3-217ENST00000504211 578 ntTSL 2 BASIC6.42□□□□□ -1.38
CIITAP33076 AC097491.1-201ENST00000507857 672 ntTSL 5 BASIC6.42□□□□□ -1.38
CIITAP33076 DUTP7-201ENST00000507982 486 ntBASIC6.42□□□□□ -1.38
CIITAP33076 COL6A4P2-205ENST00000509855 506 ntBASIC6.42□□□□□ -1.38
CIITAP33076 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC6.42□□□□□ -1.38
CIITAP33076 AC026688.1-201ENST00000520639 1168 ntBASIC6.42□□□□□ -1.38
CIITAP33076 AC091819.2-201ENST00000522292 490 ntTSL 3 BASIC6.42□□□□□ -1.38
CIITAP33076 AC112191.2-201ENST00000522428 333 ntBASIC6.42□□□□□ -1.38
CIITAP33076 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC6.42□□□□□ -1.38
CIITAP33076 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC6.42□□□□□ -1.38
CIITAP33076 AC025423.2-201ENST00000537570 439 ntBASIC6.42□□□□□ -1.38
CIITAP33076 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC6.42□□□□□ -1.38
CIITAP33076 DHFRP1-201ENST00000579682 559 ntBASIC6.42□□□□□ -1.38
CIITAP33076 AC060780.2-201ENST00000589047 198 ntBASIC6.42□□□□□ -1.38
CIITAP33076 AP2S1-210ENST00000601649 315 ntTSL 3 BASIC6.42□□□□□ -1.38
CIITAP33076 AL158211.2-201ENST00000607282 395 ntBASIC6.42□□□□□ -1.38
CIITAP33076 AP005131.7-201ENST00000610087 611 ntBASIC6.42□□□□□ -1.38
CIITAP33076 Metazoa_SRP.55-201ENST00000618452 275 ntBASIC6.42□□□□□ -1.38
CIITAP33076 AP002371.2-201ENST00000624450 503 ntBASIC6.42□□□□□ -1.38
CIITAP33076 HPVC1-201ENST00000629899 1198 ntBASIC6.42□□□□□ -1.38
CIITAP33076 OR51Q1-202ENST00000641085 1096 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
CIITAP33076 AC008691.1-209ENST00000642094 814 ntBASIC6.42□□□□□ -1.38
CIITAP33076 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
CIITAP33076 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
CIITAP33076 AC012078.1-201ENST00000405035 1646 ntBASIC6.42□□□□□ -1.38
CIITAP33076 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC6.42□□□□□ -1.38
CIITAP33076 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC6.42□□□□□ -1.38
CIITAP33076 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC6.42□□□□□ -1.38
CIITAP33076 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC6.42□□□□□ -1.38
CIITAP33076 EPB41L2-220ENST00000528282 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
CIITAP33076 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC6.41□□□□□ -1.38
CIITAP33076 AC116158.1-201ENST00000560231 2129 ntBASIC6.41□□□□□ -1.38
CIITAP33076 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC6.41□□□□□ -1.38
CIITAP33076 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC6.41□□□□□ -1.38
CIITAP33076 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
CIITAP33076 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC6.41□□□□□ -1.38
CIITAP33076 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC6.41□□□□□ -1.38
CIITAP33076 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
CIITAP33076 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
CIITAP33076 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
CIITAP33076 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC6.41□□□□□ -1.38
CIITAP33076 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
CIITAP33076 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
CIITAP33076 AC087258.1-203ENST00000545400 1629 ntTSL 2 BASIC6.41□□□□□ -1.38
CIITAP33076 RNU4-23P-201ENST00000362839 140 ntBASIC6.41□□□□□ -1.38
CIITAP33076 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC6.41□□□□□ -1.38
CIITAP33076 AL391422.1-201ENST00000402155 436 ntBASIC6.41□□□□□ -1.38
CIITAP33076 RN7SKP206-201ENST00000410823 293 ntBASIC6.41□□□□□ -1.38
CIITAP33076 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC6.41□□□□□ -1.38
CIITAP33076 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC6.41□□□□□ -1.38
CIITAP33076 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC6.41□□□□□ -1.38
CIITAP33076 SEC63P1-201ENST00000425785 1258 ntBASIC6.41□□□□□ -1.38
CIITAP33076 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC6.41□□□□□ -1.38
CIITAP33076 AL450996.1-201ENST00000445574 1202 ntBASIC6.41□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 94.3 ms