Protein–RNA interactions for Protein: P30622

CLIP1, CAP-Gly domain-containing linker protein 1, humanhuman

Predictions only

Length 1,438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1P30622 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC8.68□□□□□ -1.02
CLIP1P30622 TMPRSS15-201ENST00000284885 3947 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
CLIP1P30622 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC8.68□□□□□ -1.02
CLIP1P30622 DOCK9-203ENST00000376460 7549 ntAPPRIS P2 TSL 5 BASIC8.68□□□□□ -1.02
CLIP1P30622 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
CLIP1P30622 ZNF24-201ENST00000261332 6307 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
CLIP1P30622 RNU1-146P-201ENST00000364015 165 ntBASIC8.67□□□□□ -1.02
CLIP1P30622 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC8.67□□□□□ -1.02
CLIP1P30622 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC8.67□□□□□ -1.02
CLIP1P30622 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC8.67□□□□□ -1.02
CLIP1P30622 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC8.67□□□□□ -1.02
CLIP1P30622 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC8.67□□□□□ -1.02
CLIP1P30622 AC092811.1-202ENST00000433058 656 ntTSL 2 BASIC8.67□□□□□ -1.02
CLIP1P30622 IGBP1P3-201ENST00000447449 1000 ntBASIC8.67□□□□□ -1.02
CLIP1P30622 AL645937.3-201ENST00000453647 936 ntBASIC8.67□□□□□ -1.02
CLIP1P30622 AP000676.2-201ENST00000529711 301 ntBASIC8.67□□□□□ -1.02
CLIP1P30622 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC8.67□□□□□ -1.02
CLIP1P30622 OR11J2P-201ENST00000555298 907 ntBASIC8.67□□□□□ -1.02
CLIP1P30622 AL353796.1-201ENST00000561542 3241 ntBASIC8.67□□□□□ -1.02
CLIP1P30622 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC8.67□□□□□ -1.02
CLIP1P30622 AC009063.2-203ENST00000567860 745 ntTSL 2 BASIC8.67□□□□□ -1.02
CLIP1P30622 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC8.67□□□□□ -1.02
CLIP1P30622 WBP1LP8-201ENST00000617401 327 ntBASIC8.67□□□□□ -1.02
CLIP1P30622 AP002505.2-201ENST00000623585 696 ntBASIC8.67□□□□□ -1.02
CLIP1P30622 NEK3-211ENST00000629912 141 ntTSL 5 BASIC8.67□□□□□ -1.02
CLIP1P30622 CYP4F35P-202ENST00000636121 390 ntBASIC8.67□□□□□ -1.02
CLIP1P30622 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC8.67□□□□□ -1.02
CLIP1P30622 ANKRD26P1-204ENST00000571006 4741 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
CLIP1P30622 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC8.67□□□□□ -1.02
CLIP1P30622 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC8.67□□□□□ -1.02
CLIP1P30622 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
CLIP1P30622 OR55B1P-203ENST00000641518 2602 ntBASIC8.67□□□□□ -1.02
CLIP1P30622 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC8.67□□□□□ -1.02
CLIP1P30622 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
CLIP1P30622 MAPK10-270ENST00000641102 3538 ntBASIC8.66□□□□□ -1.02
CLIP1P30622 CNTN3-201ENST00000263665 4948 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
CLIP1P30622 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
CLIP1P30622 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
CLIP1P30622 GAPDHP25-201ENST00000447061 1001 ntBASIC8.66□□□□□ -1.02
CLIP1P30622 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC8.66□□□□□ -1.02
CLIP1P30622 AC115223.1-201ENST00000466377 870 ntBASIC8.66□□□□□ -1.02
CLIP1P30622 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC8.66□□□□□ -1.02
CLIP1P30622 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC8.66□□□□□ -1.02
CLIP1P30622 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC8.66□□□□□ -1.02
CLIP1P30622 AP002884.5-201ENST00000595053 1132 ntBASIC8.66□□□□□ -1.02
CLIP1P30622 AC073218.2-202ENST00000605962 617 ntTSL 5 BASIC8.66□□□□□ -1.02
CLIP1P30622 LINC00347-202ENST00000594461 2371 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
CLIP1P30622 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
CLIP1P30622 ZC3H12C-202ENST00000453089 9542 ntTSL 2 BASIC8.66□□□□□ -1.02
CLIP1P30622 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC8.66□□□□□ -1.02
CLIP1P30622 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC8.66□□□□□ -1.02
CLIP1P30622 AC144833.1-201ENST00000567953 4089 ntBASIC8.66□□□□□ -1.02
CLIP1P30622 TTC3-201ENST00000354749 9084 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
CLIP1P30622 DCHS2-207ENST00000623607 8912 ntAPPRIS P2 TSL 1 (best) BASIC8.65□□□□□ -1.02
CLIP1P30622 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC8.65□□□□□ -1.02
CLIP1P30622 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC8.65□□□□□ -1.02
CLIP1P30622 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC8.65□□□□□ -1.02
CLIP1P30622 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
CLIP1P30622 ATP5A1P1-201ENST00000454088 1321 ntBASIC8.65□□□□□ -1.02
CLIP1P30622 RNA5SP443-201ENST00000363083 132 ntBASIC8.65□□□□□ -1.02
CLIP1P30622 MIR765-201ENST00000390226 114 ntBASIC8.65□□□□□ -1.02
CLIP1P30622 RNU1-149P-201ENST00000390870 161 ntBASIC8.65□□□□□ -1.02
CLIP1P30622 ARPP21-215ENST00000432682 1015 ntTSL 5 BASIC8.65□□□□□ -1.02
CLIP1P30622 snoU13.29-201ENST00000459370 104 ntBASIC8.65□□□□□ -1.02
CLIP1P30622 AC109464.1-201ENST00000511091 819 ntBASIC8.65□□□□□ -1.02
CLIP1P30622 SCARNA16.4-201ENST00000516956 187 ntBASIC8.65□□□□□ -1.02
CLIP1P30622 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC8.65□□□□□ -1.02
CLIP1P30622 ASB8-202ENST00000535055 657 ntTSL 2 BASIC8.65□□□□□ -1.02
CLIP1P30622 AC127381.1-201ENST00000555979 939 ntBASIC8.65□□□□□ -1.02
CLIP1P30622 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC8.65□□□□□ -1.02
CLIP1P30622 AC021351.1-202ENST00000561394 701 ntTSL 3 BASIC8.65□□□□□ -1.02
CLIP1P30622 AC104984.1-201ENST00000581633 697 ntTSL 3 BASIC8.65□□□□□ -1.02
CLIP1P30622 RN7SL356P-201ENST00000582228 248 ntBASIC8.65□□□□□ -1.02
CLIP1P30622 AC069307.1-201ENST00000602820 447 ntBASIC8.65□□□□□ -1.02
CLIP1P30622 XIST-210ENST00000602863 775 ntTSL 3 BASIC8.65□□□□□ -1.02
CLIP1P30622 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC8.65□□□□□ -1.02
CLIP1P30622 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
CLIP1P30622 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
CLIP1P30622 VPS13B-202ENST00000357162 14019 ntAPPRIS ALT1 TSL 1 (best) BASIC8.65□□□□□ -1.02
CLIP1P30622 ENPP3-203ENST00000414305 3418 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
CLIP1P30622 LSAMP-207ENST00000539563 8821 ntTSL 3 BASIC8.65□□□□□ -1.02
CLIP1P30622 GSTCD-202ENST00000394728 2416 ntAPPRIS P1 TSL 5 BASIC8.65□□□□□ -1.03
CLIP1P30622 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC8.65□□□□□ -1.03
CLIP1P30622 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC8.65□□□□□ -1.03
CLIP1P30622 EEF1A1P14-201ENST00000421195 1376 ntBASIC8.65□□□□□ -1.03
CLIP1P30622 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC8.65□□□□□ -1.03
CLIP1P30622 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
CLIP1P30622 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
CLIP1P30622 MPDZ-202ENST00000319217 7722 ntAPPRIS ALT2 TSL 5 BASIC8.64□□□□□ -1.03
CLIP1P30622 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC8.64□□□□□ -1.03
CLIP1P30622 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC8.64□□□□□ -1.03
CLIP1P30622 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC8.64□□□□□ -1.03
CLIP1P30622 RN7SL188P-201ENST00000469842 285 ntBASIC8.64□□□□□ -1.03
CLIP1P30622 AC131953.1-201ENST00000513127 477 ntTSL 2 BASIC8.64□□□□□ -1.03
CLIP1P30622 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC8.64□□□□□ -1.03
CLIP1P30622 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC8.64□□□□□ -1.03
CLIP1P30622 SETP3-201ENST00000581726 813 ntBASIC8.64□□□□□ -1.03
CLIP1P30622 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC8.64□□□□□ -1.03
CLIP1P30622 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC8.64□□□□□ -1.03
CLIP1P30622 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Retrieved 100 of 98,524 protein–RNA pairs in 70 ms