Protein–RNA interactions for Protein: P17405

SMPD1, Sphingomyelin phosphodiesterase, humanhuman

Predictions only

Length 629 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1P17405 AC004988.1-201ENST00000415237 1771 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
SMPD1P17405 C1GALT1-201ENST00000223122 6078 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
SMPD1P17405 Z97832.2-201ENST00000605896 4261 ntBASIC8.11□□□□□ -1.11
SMPD1P17405 ZNF793-208ENST00000588578 4549 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
SMPD1P17405 IPO9-201ENST00000361565 11435 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
SMPD1P17405 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC8.11□□□□□ -1.11
SMPD1P17405 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC8.11□□□□□ -1.11
SMPD1P17405 SNX25-207ENST00000618785 3151 ntTSL 5 BASIC8.11□□□□□ -1.11
SMPD1P17405 RDH11-203ENST00000553384 1926 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
SMPD1P17405 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC8.11□□□□□ -1.11
SMPD1P17405 MYCBP2-201ENST00000357337 14736 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
SMPD1P17405 GPM6A-202ENST00000393658 2821 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
SMPD1P17405 CAST-234ENST00000511049 3273 ntAPPRIS ALT2 TSL 5 BASIC8.11□□□□□ -1.11
SMPD1P17405 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
SMPD1P17405 AC079178.2-201ENST00000439323 1624 ntBASIC8.11□□□□□ -1.11
SMPD1P17405 AC117529.2-201ENST00000512159 2068 ntBASIC8.1□□□□□ -1.11
SMPD1P17405 ZNF200-203ENST00000396871 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC8.1□□□□□ -1.11
SMPD1P17405 AL049776.1-201ENST00000624600 2025 ntBASIC8.1□□□□□ -1.11
SMPD1P17405 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC8.1□□□□□ -1.11
SMPD1P17405 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
SMPD1P17405 DCAF13P1-201ENST00000495256 1330 ntBASIC8.1□□□□□ -1.11
SMPD1P17405 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC8.1□□□□□ -1.11
SMPD1P17405 RUNX1T1-249ENST00000613886 7401 ntAPPRIS ALT1 TSL 5 BASIC8.1□□□□□ -1.11
SMPD1P17405 LINC02447-201ENST00000499242 1500 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
SMPD1P17405 OTX2-201ENST00000339475 3001 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
SMPD1P17405 IFNW1-201ENST00000380229 1932 ntAPPRIS P1 BASIC8.1□□□□□ -1.11
SMPD1P17405 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC8.1□□□□□ -1.11
SMPD1P17405 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
SMPD1P17405 SCG5-201ENST00000300175 1238 ntAPPRIS P4 TSL 1 (best) BASIC8.1□□□□□ -1.11
SMPD1P17405 RNA5SP472-201ENST00000363868 119 ntBASIC8.1□□□□□ -1.11
SMPD1P17405 MIR152-201ENST00000385212 87 ntBASIC8.1□□□□□ -1.11
SMPD1P17405 AL136100.1-201ENST00000407696 330 ntBASIC8.1□□□□□ -1.11
SMPD1P17405 VDAC1P10-201ENST00000416715 891 ntBASIC8.1□□□□□ -1.11
SMPD1P17405 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC8.1□□□□□ -1.11
SMPD1P17405 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC8.1□□□□□ -1.11
SMPD1P17405 AC009237.2-201ENST00000421358 284 ntBASIC8.1□□□□□ -1.11
SMPD1P17405 TRIM2-203ENST00000437508 3832 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
SMPD1P17405 AL050341.1-201ENST00000447743 313 ntBASIC8.1□□□□□ -1.11
SMPD1P17405 AL133319.1-201ENST00000447848 777 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
SMPD1P17405 RPL31P11-202ENST00000454082 372 ntBASIC8.1□□□□□ -1.11
SMPD1P17405 PTMAP1-205ENST00000455552 325 ntBASIC8.1□□□□□ -1.11
SMPD1P17405 AC130509.1-201ENST00000464158 433 ntBASIC8.1□□□□□ -1.11
SMPD1P17405 MTND1P16-201ENST00000465177 898 ntBASIC8.1□□□□□ -1.11
SMPD1P17405 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
SMPD1P17405 AC109445.1-201ENST00000512356 383 ntBASIC8.1□□□□□ -1.11
SMPD1P17405 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC8.1□□□□□ -1.11
SMPD1P17405 AC027541.1-201ENST00000519306 485 ntTSL 3 BASIC8.1□□□□□ -1.11
SMPD1P17405 IGHVIII-26-1-201ENST00000520387 250 ntBASIC8.1□□□□□ -1.11
SMPD1P17405 AC156455.1-201ENST00000538790 851 ntTSL 2 BASIC8.1□□□□□ -1.11
SMPD1P17405 CCDC60-204ENST00000539847 581 ntAPPRIS ALT2 TSL 3 BASIC8.1□□□□□ -1.11
SMPD1P17405 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC8.1□□□□□ -1.11
SMPD1P17405 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC8.1□□□□□ -1.11
SMPD1P17405 AP3S2-214ENST00000560940 519 ntTSL 5 BASIC8.1□□□□□ -1.11
SMPD1P17405 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC8.1□□□□□ -1.11
SMPD1P17405 AC027801.5-201ENST00000574365 416 ntTSL 3 BASIC8.1□□□□□ -1.11
SMPD1P17405 MIR5708-201ENST00000579723 85 ntBASIC8.1□□□□□ -1.11
SMPD1P17405 MIR548AB-201ENST00000584917 84 ntBASIC8.1□□□□□ -1.11
SMPD1P17405 AC011516.1-201ENST00000599129 180 ntTSL 3 BASIC8.1□□□□□ -1.11
SMPD1P17405 BNIP3P10-201ENST00000605360 577 ntBASIC8.1□□□□□ -1.11
SMPD1P17405 AL133255.1-201ENST00000606374 441 ntBASIC8.1□□□□□ -1.11
SMPD1P17405 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC8.1□□□□□ -1.11
SMPD1P17405 MESTIT1_2.1-201ENST00000616328 235 ntBASIC8.1□□□□□ -1.11
SMPD1P17405 AC073862.4-201ENST00000622982 854 ntBASIC8.1□□□□□ -1.11
SMPD1P17405 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC8.1□□□□□ -1.11
SMPD1P17405 MIR3662-201ENST00000637030 95 ntBASIC8.1□□□□□ -1.11
SMPD1P17405 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC8.1□□□□□ -1.11
SMPD1P17405 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
SMPD1P17405 PNN-201ENST00000216832 3576 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
SMPD1P17405 SNW1-204ENST00000554775 1687 ntTSL 5 BASIC8.1□□□□□ -1.11
SMPD1P17405 ZFP42-201ENST00000326866 2651 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
SMPD1P17405 LCA5-201ENST00000369846 4542 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
SMPD1P17405 SSPO-201ENST00000378016 15589 ntAPPRIS P1 TSL 5 BASIC8.1□□□□□ -1.11
SMPD1P17405 MTIF2-203ENST00000394600 2221 ntAPPRIS P1 TSL 2 BASIC8.1□□□□□ -1.11
SMPD1P17405 LINC00208-201ENST00000304233 2150 ntTSL 2 BASIC8.1□□□□□ -1.11
SMPD1P17405 FCGR3B-209ENST00000614870 1993 ntTSL 5 BASIC8.1□□□□□ -1.11
SMPD1P17405 LGI1-211ENST00000630047 1751 ntTSL 2 BASIC8.1□□□□□ -1.11
SMPD1P17405 LARP1BP1-201ENST00000506036 1359 ntBASIC8.1□□□□□ -1.11
SMPD1P17405 EEF1A1P20-201ENST00000514852 1386 ntBASIC8.1□□□□□ -1.11
SMPD1P17405 C14orf105-201ENST00000216445 3082 ntAPPRIS P3 TSL 1 (best) BASIC8.09□□□□□ -1.11
SMPD1P17405 CD46-209ENST00000367047 3089 ntTSL 5 BASIC8.09□□□□□ -1.11
SMPD1P17405 AC145138.1-201ENST00000512908 2851 ntBASIC8.09□□□□□ -1.11
SMPD1P17405 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
SMPD1P17405 CNOT4-201ENST00000315544 3783 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
SMPD1P17405 FBXO7-202ENST00000397426 1888 ntTSL 2 BASIC8.09□□□□□ -1.11
SMPD1P17405 AL356361.1-201ENST00000400943 1459 ntBASIC8.09□□□□□ -1.11
SMPD1P17405 OR5M2P-202ENST00000641241 4242 ntBASIC8.09□□□□□ -1.11
SMPD1P17405 AC090198.1-201ENST00000518639 2355 ntTSL 5 BASIC8.09□□□□□ -1.11
SMPD1P17405 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC8.09□□□□□ -1.11
SMPD1P17405 SCGB1A1-201ENST00000278282 441 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
SMPD1P17405 OR4K15-201ENST00000305051 1216 ntBASIC8.09□□□□□ -1.11
SMPD1P17405 OR51L1-201ENST00000321543 948 ntAPPRIS P1 BASIC8.09□□□□□ -1.11
SMPD1P17405 OR5B21-201ENST00000360374 931 ntAPPRIS P1 BASIC8.09□□□□□ -1.11
SMPD1P17405 AC092634.1-201ENST00000366505 199 ntBASIC8.09□□□□□ -1.11
SMPD1P17405 RNU6-331P-201ENST00000384724 107 ntBASIC8.09□□□□□ -1.11
SMPD1P17405 RNU6-780P-201ENST00000391030 104 ntBASIC8.09□□□□□ -1.11
SMPD1P17405 LDHAP5-201ENST00000394996 622 ntBASIC8.09□□□□□ -1.11
SMPD1P17405 OR4K12P-201ENST00000406538 961 ntBASIC8.09□□□□□ -1.11
SMPD1P17405 AC099535.1-201ENST00000408928 371 ntBASIC8.09□□□□□ -1.11
SMPD1P17405 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC8.09□□□□□ -1.11
SMPD1P17405 USP9YP27-201ENST00000418455 438 ntBASIC8.09□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 73.7 ms