Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC5.84□□□□□ -1.47
RETP07949 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.47
RETP07949 CYP4Z2P-201ENST00000423332 1512 ntBASIC5.84□□□□□ -1.47
RETP07949 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC5.84□□□□□ -1.47
RETP07949 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
RETP07949 AC015799.1-201ENST00000622996 3122 ntBASIC5.84□□□□□ -1.47
RETP07949 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
RETP07949 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC5.84□□□□□ -1.47
RETP07949 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.84□□□□□ -1.47
RETP07949 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.47
RETP07949 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
RETP07949 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
RETP07949 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC5.84□□□□□ -1.47
RETP07949 RNU11-201ENST00000387069 134 ntBASIC5.84□□□□□ -1.47
RETP07949 F9-202ENST00000394090 1272 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
RETP07949 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC5.84□□□□□ -1.47
RETP07949 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC5.84□□□□□ -1.47
RETP07949 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC5.84□□□□□ -1.47
RETP07949 AL354956.1-201ENST00000424487 467 ntTSL 5 BASIC5.84□□□□□ -1.47
RETP07949 AL590399.2-201ENST00000427536 309 ntBASIC5.84□□□□□ -1.47
RETP07949 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC5.84□□□□□ -1.47
RETP07949 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC5.84□□□□□ -1.47
RETP07949 VN1R54P-201ENST00000435210 1049 ntBASIC5.84□□□□□ -1.47
RETP07949 AL445928.1-201ENST00000435545 222 ntBASIC5.84□□□□□ -1.47
RETP07949 AC084149.2-201ENST00000438443 797 ntTSL 5 BASIC5.84□□□□□ -1.47
RETP07949 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC5.84□□□□□ -1.47
RETP07949 CEACAMP7-201ENST00000444105 496 ntBASIC5.84□□□□□ -1.47
RETP07949 HRAT17-202ENST00000451962 687 ntTSL 5 BASIC5.84□□□□□ -1.47
RETP07949 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC5.84□□□□□ -1.47
RETP07949 MRPS22-205ENST00000478464 1065 ntTSL 5 BASIC5.84□□□□□ -1.47
RETP07949 RPSAP50-201ENST00000481955 852 ntBASIC5.84□□□□□ -1.47
RETP07949 AC090142.2-201ENST00000483263 416 ntBASIC5.84□□□□□ -1.47
RETP07949 CCDC169-211ENST00000503173 837 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
RETP07949 SUMO2P4-201ENST00000504193 276 ntBASIC5.84□□□□□ -1.47
RETP07949 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC5.84□□□□□ -1.47
RETP07949 RN7SKP66-201ENST00000516681 231 ntBASIC5.84□□□□□ -1.47
RETP07949 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC5.84□□□□□ -1.47
RETP07949 AC008575.1-201ENST00000520401 694 ntAPPRIS P1 TSL 3 BASIC5.84□□□□□ -1.47
RETP07949 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
RETP07949 AL049779.2-201ENST00000553847 315 ntBASIC5.84□□□□□ -1.47
RETP07949 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC5.84□□□□□ -1.47
RETP07949 DPPA2P4-201ENST00000563717 878 ntBASIC5.84□□□□□ -1.47
RETP07949 AC096996.1-201ENST00000563813 325 ntBASIC5.84□□□□□ -1.47
RETP07949 MIR4260-201ENST00000583107 67 ntBASIC5.84□□□□□ -1.47
RETP07949 AC010487.1-201ENST00000594408 1172 ntBASIC5.84□□□□□ -1.47
RETP07949 AL360012.1-201ENST00000602813 131 ntBASIC5.84□□□□□ -1.47
RETP07949 SUGT1P3-202ENST00000604259 383 ntBASIC5.84□□□□□ -1.47
RETP07949 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC5.84□□□□□ -1.47
RETP07949 AC023421.1-201ENST00000590535 1785 ntBASIC5.84□□□□□ -1.47
RETP07949 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC5.84□□□□□ -1.47
RETP07949 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
RETP07949 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
RETP07949 ALB-209ENST00000503124 1741 ntTSL 5 BASIC5.84□□□□□ -1.47
RETP07949 UPRT-207ENST00000530743 1636 ntTSL 2 BASIC5.84□□□□□ -1.47
RETP07949 DMD-228ENST00000541735 7080 ntTSL 5 BASIC5.84□□□□□ -1.48
RETP07949 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
RETP07949 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.48
RETP07949 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC5.84□□□□□ -1.48
RETP07949 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC5.84□□□□□ -1.48
RETP07949 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC5.84□□□□□ -1.48
RETP07949 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC5.84□□□□□ -1.48
RETP07949 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC5.84□□□□□ -1.48
RETP07949 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC5.84□□□□□ -1.48
RETP07949 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
RETP07949 AC131971.1-201ENST00000332881 1482 ntBASIC5.83□□□□□ -1.48
RETP07949 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
RETP07949 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
RETP07949 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC5.83□□□□□ -1.48
RETP07949 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
RETP07949 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
RETP07949 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC5.83□□□□□ -1.48
RETP07949 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
RETP07949 KYNUP3-201ENST00000574386 1341 ntBASIC5.83□□□□□ -1.48
RETP07949 AP005435.3-201ENST00000531260 3198 ntBASIC5.83□□□□□ -1.48
RETP07949 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC5.83□□□□□ -1.48
RETP07949 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC5.83□□□□□ -1.48
RETP07949 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
RETP07949 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
RETP07949 OR10R3P-201ENST00000361688 942 ntBASIC5.83□□□□□ -1.48
RETP07949 RNA5SP319-201ENST00000362768 119 ntBASIC5.83□□□□□ -1.48
RETP07949 RN7SKP103-201ENST00000363848 320 ntBASIC5.83□□□□□ -1.48
RETP07949 RN7SKP273-201ENST00000411392 314 ntBASIC5.83□□□□□ -1.48
RETP07949 NMD3P2-201ENST00000421815 761 ntBASIC5.83□□□□□ -1.48
RETP07949 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC5.83□□□□□ -1.48
RETP07949 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC5.83□□□□□ -1.48
RETP07949 KRT8P51-201ENST00000438938 274 ntBASIC5.83□□□□□ -1.48
RETP07949 RPS7P3-201ENST00000443360 580 ntBASIC5.83□□□□□ -1.48
RETP07949 CBX1P2-201ENST00000453841 458 ntBASIC5.83□□□□□ -1.48
RETP07949 LINC02412-201ENST00000552584 1269 ntTSL 5 BASIC5.83□□□□□ -1.48
RETP07949 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC5.83□□□□□ -1.48
RETP07949 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
RETP07949 AL139407.1-201ENST00000613826 1175 ntBASIC5.83□□□□□ -1.48
RETP07949 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
RETP07949 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC5.83□□□□□ -1.48
RETP07949 LINC02246-206ENST00000630211 712 ntTSL 5 BASIC5.83□□□□□ -1.48
RETP07949 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC5.83□□□□□ -1.48
RETP07949 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC5.83□□□□□ -1.48
RETP07949 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
RETP07949 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
RETP07949 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 130.8 ms