Protein–RNA interactions for Protein: P06727

APOA4, Apolipoprotein A-IV, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA4P06727 AC005077.1-201ENST00000449226 375 ntBASIC5.87□□□□□ -1.47
APOA4P06727 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC5.87□□□□□ -1.47
APOA4P06727 PPIAP27-201ENST00000453800 265 ntBASIC5.87□□□□□ -1.47
APOA4P06727 BX276092.8-201ENST00000455722 250 ntBASIC5.87□□□□□ -1.47
APOA4P06727 HNRNPDLP3-201ENST00000456745 380 ntBASIC5.87□□□□□ -1.47
APOA4P06727 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC5.87□□□□□ -1.47
APOA4P06727 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC5.87□□□□□ -1.47
APOA4P06727 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC5.87□□□□□ -1.47
APOA4P06727 RN7SL741P-201ENST00000482473 289 ntBASIC5.87□□□□□ -1.47
APOA4P06727 AC008629.2-201ENST00000503783 483 ntBASIC5.87□□□□□ -1.47
APOA4P06727 AC025470.2-201ENST00000506106 897 ntTSL 2 BASIC5.87□□□□□ -1.47
APOA4P06727 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC5.87□□□□□ -1.47
APOA4P06727 AC093815.1-201ENST00000508637 280 ntBASIC5.87□□□□□ -1.47
APOA4P06727 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC5.87□□□□□ -1.47
APOA4P06727 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC5.87□□□□□ -1.47
APOA4P06727 AC027343.2-201ENST00000513219 343 ntTSL 3 BASIC5.87□□□□□ -1.47
APOA4P06727 AC111000.6-201ENST00000514471 709 ntBASIC5.87□□□□□ -1.47
APOA4P06727 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC5.87□□□□□ -1.47
APOA4P06727 RN7SKP238-201ENST00000516483 249 ntBASIC5.87□□□□□ -1.47
APOA4P06727 IGKV3D-25-201ENST00000519599 235 ntBASIC5.87□□□□□ -1.47
APOA4P06727 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC5.87□□□□□ -1.47
APOA4P06727 AC024405.1-201ENST00000532521 1042 ntBASIC5.87□□□□□ -1.47
APOA4P06727 AL671883.2-201ENST00000539514 536 ntTSL 4 BASIC5.87□□□□□ -1.47
APOA4P06727 AC016257.1-201ENST00000550088 641 ntTSL 2 BASIC5.87□□□□□ -1.47
APOA4P06727 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
APOA4P06727 AL135838.1-201ENST00000556080 235 ntTSL 3 BASIC5.87□□□□□ -1.47
APOA4P06727 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC5.87□□□□□ -1.47
APOA4P06727 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC5.87□□□□□ -1.47
APOA4P06727 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC5.87□□□□□ -1.47
APOA4P06727 AP005119.1-201ENST00000580956 292 ntBASIC5.87□□□□□ -1.47
APOA4P06727 AC090236.2-201ENST00000587933 1101 ntBASIC5.87□□□□□ -1.47
APOA4P06727 ZNF235-204ENST00000589799 955 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
APOA4P06727 AC010320.2-201ENST00000593857 551 ntTSL 4 BASIC5.87□□□□□ -1.47
APOA4P06727 RNA5SP439-201ENST00000617595 124 ntBASIC5.87□□□□□ -1.47
APOA4P06727 AC026367.3-201ENST00000619032 590 ntBASIC5.87□□□□□ -1.47
APOA4P06727 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC5.87□□□□□ -1.47
APOA4P06727 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC5.87□□□□□ -1.47
APOA4P06727 AC005618.4-201ENST00000625053 554 ntBASIC5.87□□□□□ -1.47
APOA4P06727 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC5.87□□□□□ -1.47
APOA4P06727 SAMD3-205ENST00000457563 1877 ntTSL 2 BASIC5.87□□□□□ -1.47
APOA4P06727 LINC02019-201ENST00000608605 2060 ntBASIC5.87□□□□□ -1.47
APOA4P06727 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.87□□□□□ -1.47
APOA4P06727 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
APOA4P06727 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC5.86□□□□□ -1.47
APOA4P06727 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
APOA4P06727 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
APOA4P06727 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
APOA4P06727 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
APOA4P06727 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC5.86□□□□□ -1.47
APOA4P06727 LYARP1-201ENST00000436977 1501 ntBASIC5.86□□□□□ -1.47
APOA4P06727 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC5.86□□□□□ -1.47
APOA4P06727 VPS35P1-201ENST00000563400 1518 ntBASIC5.86□□□□□ -1.47
APOA4P06727 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
APOA4P06727 EEF1A1P30-201ENST00000429708 1315 ntBASIC5.86□□□□□ -1.47
APOA4P06727 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC5.86□□□□□ -1.47
APOA4P06727 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC5.86□□□□□ -1.47
APOA4P06727 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC5.86□□□□□ -1.47
APOA4P06727 AC069154.1-201ENST00000432914 542 ntBASIC5.86□□□□□ -1.47
APOA4P06727 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
APOA4P06727 AC211433.1-202ENST00000434256 1187 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
APOA4P06727 ATP6V1E1P1-201ENST00000439215 681 ntBASIC5.86□□□□□ -1.47
APOA4P06727 AL663074.2-201ENST00000440621 479 ntBASIC5.86□□□□□ -1.47
APOA4P06727 RPS7P3-201ENST00000443360 580 ntBASIC5.86□□□□□ -1.47
APOA4P06727 RPL12P39-201ENST00000455456 496 ntBASIC5.86□□□□□ -1.47
APOA4P06727 RPL38P3-201ENST00000484463 213 ntBASIC5.86□□□□□ -1.47
APOA4P06727 RN7SL170P-201ENST00000487098 295 ntBASIC5.86□□□□□ -1.47
APOA4P06727 OR7E157P-201ENST00000494376 911 ntBASIC5.86□□□□□ -1.47
APOA4P06727 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC5.86□□□□□ -1.47
APOA4P06727 AC239584.1-201ENST00000510419 732 ntTSL 5 BASIC5.86□□□□□ -1.47
APOA4P06727 MOCS2-206ENST00000510818 1251 ntTSL 5 BASIC5.86□□□□□ -1.47
APOA4P06727 AC011632.2-201ENST00000520696 738 ntTSL 3 BASIC5.86□□□□□ -1.47
APOA4P06727 AC018442.3-201ENST00000523025 183 ntBASIC5.86□□□□□ -1.47
APOA4P06727 EIF4A2P5-201ENST00000529914 499 ntBASIC5.86□□□□□ -1.47
APOA4P06727 SNHG1-205ENST00000537869 1038 ntTSL 3 BASIC5.86□□□□□ -1.47
APOA4P06727 AC007956.1-201ENST00000555623 542 ntBASIC5.86□□□□□ -1.47
APOA4P06727 AC020661.4-201ENST00000561388 500 ntTSL 3 BASIC5.86□□□□□ -1.47
APOA4P06727 AC018552.1-201ENST00000562099 811 ntBASIC5.86□□□□□ -1.47
APOA4P06727 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC5.86□□□□□ -1.47
APOA4P06727 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC5.86□□□□□ -1.47
APOA4P06727 MIR4271-201ENST00000582451 67 ntBASIC5.86□□□□□ -1.47
APOA4P06727 AC005244.1-201ENST00000582566 339 ntBASIC5.86□□□□□ -1.47
APOA4P06727 MOCS2-210ENST00000584946 736 ntTSL 5 BASIC5.86□□□□□ -1.47
APOA4P06727 TTN-AS1-226ENST00000588716 604 ntTSL 5 BASIC5.86□□□□□ -1.47
APOA4P06727 NANOGP3-201ENST00000605855 286 ntBASIC5.86□□□□□ -1.47
APOA4P06727 AL133406.3-201ENST00000606817 541 ntBASIC5.86□□□□□ -1.47
APOA4P06727 AC019131.2-201ENST00000609071 870 ntBASIC5.86□□□□□ -1.47
APOA4P06727 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
APOA4P06727 AC006840.1-201ENST00000623069 542 ntBASIC5.86□□□□□ -1.47
APOA4P06727 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC5.86□□□□□ -1.47
APOA4P06727 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
APOA4P06727 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
APOA4P06727 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
APOA4P06727 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC5.86□□□□□ -1.47
APOA4P06727 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
APOA4P06727 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
APOA4P06727 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC5.86□□□□□ -1.47
APOA4P06727 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
APOA4P06727 AC140134.1-201ENST00000511830 3544 ntBASIC5.86□□□□□ -1.47
APOA4P06727 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
APOA4P06727 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 109.1 ms